| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is folE2
Identifier: 85859762
GI number: 85859762
Start: 1997045
End: 1997812
Strand: Direct
Name: folE2
Synonym: SYN_01308
Alternate gene names: 85859762
Gene position: 1997045-1997812 (Clockwise)
Preceding gene: 85859760
Following gene: 85859763
Centisome position: 62.81
GC content: 46.88
Gene sequence:
>768_bases ATGATCGATATTCAAAATCTGGAAGACCACAGAAAAATCAACATCCAGAAAGTCGGAGTCAAAGGCATCAATTATCCCAT CGTTGTTCTGGATAAAGCAAAGGGCACGCAGCACGTGAACGCTTCCATAAACATGTACGTCGATCTGCCGCATCATTTCA AGGGAACGCACATGAGCCGCTTTATCGAAGTCCTCAATGAGTTTCGGGGAGAAATCAACATCCGAACATTTCATACCATC CTGGAAAAAGTCAGGGATAAACTCAAAGCAGAATCGGCACACATGGAAATCACGTTCCCATATTTCATCGAAAAAACAGC CCCGGTTTCCGGAGCAAAAAGTCTGATGGACTACATTTGTGCTTTCAGCGGCATGAATGCCGAAAACAAAAAAGATTTTC TCGTGGGCGTTGTGGTTCCGGTCACAACCGTCTGTCCCTGCTCCAAGGAAATCAGCTGCATGGGCGCCCACAATCAGCGG AGTCATGTGACGGTCAAAGTCCGATTCAAAAAGTTCTTCTGGCTGGAGGACATCATCCGGCTCGTGGAAACATCAGCCAG CGGCGAGGTCTATTCCCTTCTCAAGCGCGTGGATGAAAAATACGTGACGGAACAGGGCTATGCGAATCCCATGTTTGTGG AGGATGTGGTCAGAAACGTCGCGGAACGTCTCAATGAAAATTCCAATCTCACCTGGTACAGCGTTGAAGCGGAAAACTTT GAAAGCATTCATAATCATAATGCCTATGCCTACGTGGAAAAAGAGTGA
Upstream 100 bases:
>100_bases TCTTATAATGTATAAGAGCTTTCATCATAAGCTACAGAAAATGGTTATGCGTATATTCTCTCATGAAAGAAGACATCAAC ATTCCGCATGAAATAAGACT
Downstream 100 bases:
>100_bases AGCCTATGCCTTCCGATCCTGTAAATTTCTTTAATATATACTCCCACGGCTTCATCAGGACGGCGATCTGCATTCCGGAT GTCCGCGTCGCCGATACGGA
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MIDIQNLEDHRKINIQKVGVKGINYPIVVLDKAKGTQHVNASINMYVDLPHHFKGTHMSRFIEVLNEFRGEINIRTFHTI LEKVRDKLKAESAHMEITFPYFIEKTAPVSGAKSLMDYICAFSGMNAENKKDFLVGVVVPVTTVCPCSKEISCMGAHNQR SHVTVKVRFKKFFWLEDIIRLVETSASGEVYSLLKRVDEKYVTEQGYANPMFVEDVVRNVAERLNENSNLTWYSVEAENF ESIHNHNAYAYVEKE
Sequences:
>Translated_255_residues MIDIQNLEDHRKINIQKVGVKGINYPIVVLDKAKGTQHVNASINMYVDLPHHFKGTHMSRFIEVLNEFRGEINIRTFHTI LEKVRDKLKAESAHMEITFPYFIEKTAPVSGAKSLMDYICAFSGMNAENKKDFLVGVVVPVTTVCPCSKEISCMGAHNQR SHVTVKVRFKKFFWLEDIIRLVETSASGEVYSLLKRVDEKYVTEQGYANPMFVEDVVRNVAERLNENSNLTWYSVEAENF ESIHNHNAYAYVEKE >Mature_255_residues MIDIQNLEDHRKINIQKVGVKGINYPIVVLDKAKGTQHVNASINMYVDLPHHFKGTHMSRFIEVLNEFRGEINIRTFHTI LEKVRDKLKAESAHMEITFPYFIEKTAPVSGAKSLMDYICAFSGMNAENKKDFLVGVVVPVTTVCPCSKEISCMGAHNQR SHVTVKVRFKKFFWLEDIIRLVETSASGEVYSLLKRVDEKYVTEQGYANPMFVEDVVRNVAERLNENSNLTWYSVEAENF ESIHNHNAYAYVEKE
Specific function: Converts GTP to 7,8-dihydroneopterin triphosphate
COG id: COG1469
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase IV family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GCH4_SYNAS (Q2LUP0)
Other databases:
- EMBL: CP000252 - RefSeq: YP_461964.1 - ProteinModelPortal: Q2LUP0 - SMR: Q2LUP0 - STRING: Q2LUP0 - GeneID: 3882569 - GenomeReviews: CP000252_GR - KEGG: sat:SYN_01308 - NMPDR: fig|56780.10.peg.1907 - eggNOG: COG1469 - HOGENOM: HBG626871 - OMA: SLMDYEV - BioCyc: SACI56780:SYN_01308-MONOMER - HAMAP: MF_01527_B - InterPro: IPR022838 - InterPro: IPR003801 - InterPro: IPR002042 - Gene3D: G3DSA:3.10.270.10 - TIGRFAMs: TIGR00294
Pfam domain/function: PF02649 DUF198
EC number: =3.5.4.16
Molecular weight: Translated: 29293; Mature: 29293
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDIQNLEDHRKINIQKVGVKGINYPIVVLDKAKGTQHVNASINMYVDLPHHFKGTHMSR CCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCEEECCEEEEEEECCCCCCCCHHHH FIEVLNEFRGEINIRTFHTILEKVRDKLKAESAHMEITFPYFIEKTAPVSGAKSLMDYIC HHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCEEEEEEHHEEECCCCCCHHHHHHHHHH AFSGMNAENKKDFLVGVVVPVTTVCPCSKEISCMGAHNQRSHVTVKVRFKKFFWLEDIIR HHCCCCCCCCCCEEEEEEEHHHHCCCCCCCCEEECCCCCCCEEEEEEEEHHHHHHHHHHH LVETSASGEVYSLLKRVDEKYVTEQGYANPMFVEDVVRNVAERLNENSNLTWYSVEAENF HHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHH ESIHNHNAYAYVEKE HHHHCCCEEEEEECC >Mature Secondary Structure MIDIQNLEDHRKINIQKVGVKGINYPIVVLDKAKGTQHVNASINMYVDLPHHFKGTHMSR CCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCEEECCEEEEEEECCCCCCCCHHHH FIEVLNEFRGEINIRTFHTILEKVRDKLKAESAHMEITFPYFIEKTAPVSGAKSLMDYIC HHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCEEEEEEHHEEECCCCCCHHHHHHHHHH AFSGMNAENKKDFLVGVVVPVTTVCPCSKEISCMGAHNQRSHVTVKVRFKKFFWLEDIIR HHCCCCCCCCCCEEEEEEEHHHHCCCCCCCCEEECCCCCCCEEEEEEEEHHHHHHHHHHH LVETSASGEVYSLLKRVDEKYVTEQGYANPMFVEDVVRNVAERLNENSNLTWYSVEAENF HHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHH ESIHNHNAYAYVEKE HHHHCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA