| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is fbp
Identifier: 85859647
GI number: 85859647
Start: 1875942
End: 1876940
Strand: Direct
Name: fbp
Synonym: SYN_01924
Alternate gene names: 85859647
Gene position: 1875942-1876940 (Clockwise)
Preceding gene: 85859646
Following gene: 85859654
Centisome position: 59.0
GC content: 51.65
Gene sequence:
>999_bases ATGCCAATAGAGTTCGAACAGACATTTCGCAATTTTTTAATGGAGCATCAGGAAAAGTACAACCGCACCTACCACTTCCT GATTCTTATGGATTCCATCATCACAGCGGCCCAGCGCATTGAGCTGTATTATCGCACCGGCGCGCTCAAGGGAAATCTTG GCATGGCGGGCTCAATCAATGTACAGGGCGAAAGCGTCATGAAGATGGATGATATCGCCAATGAAATCGTACTCCACTAT CTGGCGGCAAGCAATCGCGTAATTCAGGTTGTGAGCGAAGAAAGCGATGACATCGTCGATATGAACAAGGACGGCGGCCG CTACTTCGTATATTTCGATCCACTCGACGGATCCTCAAATGTTGCCCATGGCCTGCCGGTCGGGTTTCTGTTCGGCATTG CCAAGCGCAATCTGGACGGCAATATGAAGGGTCCTGAAGATTTTCATCTCCGCGAAGGCAACGATTATATCGCTGCGGGC ATGTTTGTCATTCCGACGGGCATGTTCACGCTGGCTCTTCGCGATGCGGGCTGCTGGCGCTTCCATGCCGACGAAACGGC GACGTATGTCAAACCCATGCGCATGACCCTGCCCGACGATCCCAAAAAATGGGAATTATCATTCAATTCGGCCAATACGA CCGTCTTCAGCGAAAAAGTCCAGAGTTGGATTCAGGTCAATATAAGTAAATACAAGTTTCGTTATATCGGAGCGCTTGCC GGTGACTTTCACCGGCTGCTCACAAATGGCGGCCTGTTCATGTATCCGGCAATCGTCAAGCATCCCGATCCAAAAGAAAA CCGGCCCCAGGGAAAACTGCGGCTTCTGTATGAGGCAAATGTCGTGGCTTTTATGTGCCGGGAAGCCGGCGGCGACGCCA TTGATGAAACCGGGACGCGCATTATGGAAATCAAACCGGCCGGTCATCACCAGCGCACGACGCTGTATGTGGGTTCCAAG CCCATCATCGATGAACTTGCCTCCCTGTTCAAGAGTTAG
Upstream 100 bases:
>100_bases TTCTGAAATCGACTTCGCGCCGTTCCCGAAAGCGGCGCATTGAGGTGCGCGGCAGCACAGTTTCTGCAACGATTTTTTAA CAGTTTTACAGGAGGGTTTT
Downstream 100 bases:
>100_bases CGCTGCACATTTCTCAAAAGCTGCGGAATTCGTCTGATAATTCAGGCGAATCCTTTTTTTCGGATCGACAGCGACATTCT TTACGACAGAGGATTTCGGT
Product: fructose-1,6-bisphosphatase
Products: NA
Alternate protein names: FBPase class 1; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MPIEFEQTFRNFLMEHQEKYNRTYHFLILMDSIITAAQRIELYYRTGALKGNLGMAGSINVQGESVMKMDDIANEIVLHY LAASNRVIQVVSEESDDIVDMNKDGGRYFVYFDPLDGSSNVAHGLPVGFLFGIAKRNLDGNMKGPEDFHLREGNDYIAAG MFVIPTGMFTLALRDAGCWRFHADETATYVKPMRMTLPDDPKKWELSFNSANTTVFSEKVQSWIQVNISKYKFRYIGALA GDFHRLLTNGGLFMYPAIVKHPDPKENRPQGKLRLLYEANVVAFMCREAGGDAIDETGTRIMEIKPAGHHQRTTLYVGSK PIIDELASLFKS
Sequences:
>Translated_332_residues MPIEFEQTFRNFLMEHQEKYNRTYHFLILMDSIITAAQRIELYYRTGALKGNLGMAGSINVQGESVMKMDDIANEIVLHY LAASNRVIQVVSEESDDIVDMNKDGGRYFVYFDPLDGSSNVAHGLPVGFLFGIAKRNLDGNMKGPEDFHLREGNDYIAAG MFVIPTGMFTLALRDAGCWRFHADETATYVKPMRMTLPDDPKKWELSFNSANTTVFSEKVQSWIQVNISKYKFRYIGALA GDFHRLLTNGGLFMYPAIVKHPDPKENRPQGKLRLLYEANVVAFMCREAGGDAIDETGTRIMEIKPAGHHQRTTLYVGSK PIIDELASLFKS >Mature_331_residues PIEFEQTFRNFLMEHQEKYNRTYHFLILMDSIITAAQRIELYYRTGALKGNLGMAGSINVQGESVMKMDDIANEIVLHYL AASNRVIQVVSEESDDIVDMNKDGGRYFVYFDPLDGSSNVAHGLPVGFLFGIAKRNLDGNMKGPEDFHLREGNDYIAAGM FVIPTGMFTLALRDAGCWRFHADETATYVKPMRMTLPDDPKKWELSFNSANTTVFSEKVQSWIQVNISKYKFRYIGALAG DFHRLLTNGGLFMYPAIVKHPDPKENRPQGKLRLLYEANVVAFMCREAGGDAIDETGTRIMEIKPAGHHQRTTLYVGSKP IIDELASLFKS
Specific function: INVOLVED IN SEVERAL METABOLIC PATHWAYS. IN E.COLI AND YEAST IT IS NECESSARY FOR GROWTH ON SUBSTANCES SUCH AS GLYCEROL, SUCCINATE AND ACETATE. [C]
COG id: COG0158
COG function: function code G; Fructose-1,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FBPase class 1 family
Homologues:
Organism=Homo sapiens, GI22907028, Length=326, Percent_Identity=30.9815950920245, Blast_Score=149, Evalue=3e-36, Organism=Homo sapiens, GI189083692, Length=333, Percent_Identity=30.9309309309309, Blast_Score=146, Evalue=3e-35, Organism=Homo sapiens, GI16579888, Length=333, Percent_Identity=30.9309309309309, Blast_Score=146, Evalue=3e-35, Organism=Escherichia coli, GI1790679, Length=336, Percent_Identity=33.0357142857143, Blast_Score=161, Evalue=5e-41, Organism=Caenorhabditis elegans, GI17508131, Length=330, Percent_Identity=31.5151515151515, Blast_Score=156, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6323409, Length=331, Percent_Identity=30.5135951661631, Blast_Score=150, Evalue=3e-37, Organism=Drosophila melanogaster, GI45550998, Length=334, Percent_Identity=31.437125748503, Blast_Score=134, Evalue=6e-32, Organism=Drosophila melanogaster, GI19921562, Length=334, Percent_Identity=31.437125748503, Blast_Score=134, Evalue=7e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): F16PA_SYNAS (Q2LUC0)
Other databases:
- EMBL: CP000252 - RefSeq: YP_461849.1 - HSSP: P0A993 - ProteinModelPortal: Q2LUC0 - SMR: Q2LUC0 - STRING: Q2LUC0 - GeneID: 3883230 - GenomeReviews: CP000252_GR - KEGG: sat:SYN_01924 - NMPDR: fig|56780.10.peg.1788 - eggNOG: COG0158 - HOGENOM: HBG731261 - OMA: YSINEGS - PhylomeDB: Q2LUC0 - BioCyc: SACI56780:SYN_01924-MONOMER - GO: GO:0005737 - HAMAP: MF_01855 - InterPro: IPR000146 - InterPro: IPR000760 - PANTHER: PTHR11556 - PRINTS: PR00115 - PRINTS: PR00377
Pfam domain/function: PF00316 FBPase
EC number: =3.1.3.11
Molecular weight: Translated: 37530; Mature: 37399
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00124 FBPASE
Important sites: BINDING 209-209 BINDING 235-235 BINDING 272-272
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIEFEQTFRNFLMEHQEKYNRTYHFLILMDSIITAAQRIELYYRTGALKGNLGMAGSIN CCCCHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHEEEEEEECCEECCCCCCEEEE VQGESVMKMDDIANEIVLHYLAASNRVIQVVSEESDDIVDMNKDGGRYFVYFDPLDGSSN ECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEECCCCCEEEEEEECCCCCCC VAHGLPVGFLFGIAKRNLDGNMKGPEDFHLREGNDYIAAGMFVIPTGMFTLALRDAGCWR CCCCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCEEEECEEEECCCEEEEEEECCCCEE FHADETATYVKPMRMTLPDDPKKWELSFNSANTTVFSEKVQSWIQVNISKYKFRYIGALA EECCCCCCEECCEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHEEEHHHEEEEEEHHHH GDFHRLLTNGGLFMYPAIVKHPDPKENRPQGKLRLLYEANVVAFMCREAGGDAIDETGTR HHHHHHHHCCCEEEEHHHHCCCCCCCCCCCCEEEEEEECCEEEEEEHHCCCCCCCCCCCE IMEIKPAGHHQRTTLYVGSKPIIDELASLFKS EEEECCCCCCCEEEEEECCCHHHHHHHHHHCC >Mature Secondary Structure PIEFEQTFRNFLMEHQEKYNRTYHFLILMDSIITAAQRIELYYRTGALKGNLGMAGSIN CCCHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHEEEEEEECCEECCCCCCEEEE VQGESVMKMDDIANEIVLHYLAASNRVIQVVSEESDDIVDMNKDGGRYFVYFDPLDGSSN ECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEECCCCCEEEEEEECCCCCCC VAHGLPVGFLFGIAKRNLDGNMKGPEDFHLREGNDYIAAGMFVIPTGMFTLALRDAGCWR CCCCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCEEEECEEEECCCEEEEEEECCCCEE FHADETATYVKPMRMTLPDDPKKWELSFNSANTTVFSEKVQSWIQVNISKYKFRYIGALA EECCCCCCEECCEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHEEEHHHEEEEEEHHHH GDFHRLLTNGGLFMYPAIVKHPDPKENRPQGKLRLLYEANVVAFMCREAGGDAIDETGTR HHHHHHHHCCCEEEEHHHHCCCCCCCCCCCCEEEEEEECCEEEEEEHHCCCCCCCCCCCE IMEIKPAGHHQRTTLYVGSKPIIDELASLFKS EEEECCCCCCCEEEEEECCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA