Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85859645

Identifier: 85859645

GI number: 85859645

Start: 1873925

End: 1874389

Strand: Direct

Name: 85859645

Synonym: SYN_03614

Alternate gene names: NA

Gene position: 1873925-1874389 (Clockwise)

Preceding gene: 85859641

Following gene: 85859646

Centisome position: 58.94

GC content: 44.09

Gene sequence:

>465_bases
ATGAGAATACATCTGAACAGAAAAAGAAGTAGATTATGTTACACGTCCTTCGCGGCGTTTCTTCTCGCCTTCATGTGCAT
AGCAGCCTGCGGCGCGCAGATCGGACAGACTGTCATATCCGAACCGGATGAGTACAGCAACAACTATGAAGCGAAAGAGA
AATTCATCCTAAGGGCTGTTGCCAGAGTATTTAAAGAAAAAAAAATGGGAAGCAATGTCCGGATTGATGAGGAGAACCGT
ATCGTGGAAACGGATTTTCTGACTCAGAATGACTGGAGGACAAAGAGTCTTGCCCGGATCAAACCACTCAACTGGAAGGA
AAGTGAAGTGACCCTTTCCGTGATTACGGAAAAGAGAACCGAGTCAGGCTGGGAAATGCGCCGCCTGCTGGAAAAAGAAC
AATACGTGAAGATTTTTGATACGATCGAGCTGAAGATTTATGAAGAAATGTATAAAATGGAATAA

Upstream 100 bases:

>100_bases
TATAGCGTGATTTTTCTATCATCCAGTGTCACCCGTGTCCGCAGCGTTCACAAACGGCCCATCATTCCCAAGCCGGTCCG
TCAGAAGGAGAATATTTTCC

Downstream 100 bases:

>100_bases
TAAATAACCCCCGGCCCCCCTCCAATGGGGGAAATGTCCCATCGGGCAGTCGTTCCATCAACCAGCGTCAAGAGACTTGA
GCAATGGGAGAACGAAGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MRIHLNRKRSRLCYTSFAAFLLAFMCIAACGAQIGQTVISEPDEYSNNYEAKEKFILRAVARVFKEKKMGSNVRIDEENR
IVETDFLTQNDWRTKSLARIKPLNWKESEVTLSVITEKRTESGWEMRRLLEKEQYVKIFDTIELKIYEEMYKME

Sequences:

>Translated_154_residues
MRIHLNRKRSRLCYTSFAAFLLAFMCIAACGAQIGQTVISEPDEYSNNYEAKEKFILRAVARVFKEKKMGSNVRIDEENR
IVETDFLTQNDWRTKSLARIKPLNWKESEVTLSVITEKRTESGWEMRRLLEKEQYVKIFDTIELKIYEEMYKME
>Mature_154_residues
MRIHLNRKRSRLCYTSFAAFLLAFMCIAACGAQIGQTVISEPDEYSNNYEAKEKFILRAVARVFKEKKMGSNVRIDEENR
IVETDFLTQNDWRTKSLARIKPLNWKESEVTLSVITEKRTESGWEMRRLLEKEQYVKIFDTIELKIYEEMYKME

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18320; Mature: 18320

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIHLNRKRSRLCYTSFAAFLLAFMCIAACGAQIGQTVISEPDEYSNNYEAKEKFILRAV
CEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
ARVFKEKKMGSNVRIDEENRIVETDFLTQNDWRTKSLARIKPLNWKESEVTLSVITEKRT
HHHHHHHHCCCCCEECCCCCEEEECCCCCCCCCCHHHHHCCCCCCCCHHEEHHHHHHHHC
ESGWEMRRLLEKEQYVKIFDTIELKIYEEMYKME
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRIHLNRKRSRLCYTSFAAFLLAFMCIAACGAQIGQTVISEPDEYSNNYEAKEKFILRAV
CEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
ARVFKEKKMGSNVRIDEENRIVETDFLTQNDWRTKSLARIKPLNWKESEVTLSVITEKRT
HHHHHHHHCCCCCEECCCCCEEEECCCCCCCCCCHHHHHCCCCCCCCHHEEHHHHHHHHC
ESGWEMRRLLEKEQYVKIFDTIELKIYEEMYKME
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA