| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is yaaT [H]
Identifier: 85859640
GI number: 85859640
Start: 1867629
End: 1868417
Strand: Direct
Name: yaaT [H]
Synonym: SYN_00559
Alternate gene names: 85859640
Gene position: 1867629-1868417 (Clockwise)
Preceding gene: 85859639
Following gene: 85859641
Centisome position: 58.74
GC content: 46.01
Gene sequence:
>789_bases TTGATAAAAAAAAGAAAATTTCGGGAGATTTTGCAACCTGTGCATAAAAATATTATCGGTGTCAGATTCAAGAAAGAAGG AAAGATTTACAGCTTCGATGCGGGAGATCTCAATCTCAAGATCAAAGACCAGATCATCGTTTCAACGGAAGATGGCCTGT CCATGGGAACTGTGATTACCAGCATTACAAACCAACCCGAAGGCAACCTGCCGCCCAATCTGAAGCCTGTGGTTCGCAAA GTAACGGAAGAAGACCTCCTCATACAGAAAAACAACAAGATCCTCGAAAAAGGCTGCTTCTCGTTCTGTGCGGAAAGAAT CAGGATCCGGAATCTTCCGATGAAGCTGATCGATGTGGAGTGTCTTTTTGATAAAAGCAAAATCATTTTCTATTTCACGG CGGAAAACCGGGTGGACTTCAGGGAAATCGTCAAGGATCTGGCCCAGAAGTACAAGACAAAAATTGAACTGAGACAGATC GGAGCACGACAGGAGGCCCGGATTATCAAAGGAATGGGGGTCTGCGGCCGGGAAATCTGCTGTGTCAATCTACTTCATAA CCTGGACCGGGTTTCTGTGAAAATGGCCAAGGAACAGAATATGTCGCTCAATCCTGAAAAGATTTCCGGGTTATGCGGTC GTCTCATGTGTTGTCTGGCCTATGAATACGATTCCTATCGCGAACAGAAAAAAGAAAAAAGCGTATCGGGCCGGAAAGAT AAAGACGGCCCCCCCAAACCGGGAGATGGGGAAAAGACGCCTTTGGAACCGGCTGCTGTTGAACATTGA
Upstream 100 bases:
>100_bases TCGGCTTCGCGATCGGTTTTCATATATGCGTCGGGGTTCGCGTGTTGCGCTTATACCCGGCCATTTTTAAAGCATTCCTG ATCCGGAATTTGAAGTTGTA
Downstream 100 bases:
>100_bases GTGTCTTCTGTGTAGAAAGGATTTTTATGGAAAAAACGTTTTACATCACAACGCCAATCTATTATGTCAATGCTTCTCCG CATATCGGTCATGCCTATAC
Product: signal peptidase II (PSP1) -like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MIKKRKFREILQPVHKNIIGVRFKKEGKIYSFDAGDLNLKIKDQIIVSTEDGLSMGTVITSITNQPEGNLPPNLKPVVRK VTEEDLLIQKNNKILEKGCFSFCAERIRIRNLPMKLIDVECLFDKSKIIFYFTAENRVDFREIVKDLAQKYKTKIELRQI GARQEARIIKGMGVCGREICCVNLLHNLDRVSVKMAKEQNMSLNPEKISGLCGRLMCCLAYEYDSYREQKKEKSVSGRKD KDGPPKPGDGEKTPLEPAAVEH
Sequences:
>Translated_262_residues MIKKRKFREILQPVHKNIIGVRFKKEGKIYSFDAGDLNLKIKDQIIVSTEDGLSMGTVITSITNQPEGNLPPNLKPVVRK VTEEDLLIQKNNKILEKGCFSFCAERIRIRNLPMKLIDVECLFDKSKIIFYFTAENRVDFREIVKDLAQKYKTKIELRQI GARQEARIIKGMGVCGREICCVNLLHNLDRVSVKMAKEQNMSLNPEKISGLCGRLMCCLAYEYDSYREQKKEKSVSGRKD KDGPPKPGDGEKTPLEPAAVEH >Mature_262_residues MIKKRKFREILQPVHKNIIGVRFKKEGKIYSFDAGDLNLKIKDQIIVSTEDGLSMGTVITSITNQPEGNLPPNLKPVVRK VTEEDLLIQKNNKILEKGCFSFCAERIRIRNLPMKLIDVECLFDKSKIIFYFTAENRVDFREIVKDLAQKYKTKIELRQI GARQEARIIKGMGVCGREICCVNLLHNLDRVSVKMAKEQNMSLNPEKISGLCGRLMCCLAYEYDSYREQKKEKSVSGRKD KDGPPKPGDGEKTPLEPAAVEH
Specific function: Essential for the phosphorelay during initiation of sporulation. May control the level of phosphorylated spo0A through spo0E activity during sporulation [H]
COG id: COG1774
COG function: function code S; Uncharacterized homolog of PSP1
Gene ontology:
Cell location: Cytoplasm. Note=In the vegetative phase, localized throughout the periphery of the cell and the division septum. In the sporulation stages, fluorescence of the yaaT-GFP fusion protein was observed as two dots at the sides of an asymmetric septum and at th
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PSP1 C-terminal domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007557 [H]
Pfam domain/function: PF04468 PSP1 [H]
EC number: NA
Molecular weight: Translated: 29916; Mature: 29916
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKKRKFREILQPVHKNIIGVRFKKEGKIYSFDAGDLNLKIKDQIIVSTEDGLSMGTVIT CCCHHHHHHHHHHHHHHHEEEEEECCCCEEEECCCCEEEEEECEEEEECCCCCHHHHHHH SITNQPEGNLPPNLKPVVRKVTEEDLLIQKNNKILEKGCFSFCAERIRIRNLPMKLIDVE HHCCCCCCCCCCCHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEE CLFDKSKIIFYFTAENRVDFREIVKDLAQKYKTKIELRQIGARQEARIIKGMGVCGREIC EEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHH CVNLLHNLDRVSVKMAKEQNMSLNPEKISGLCGRLMCCLAYEYDSYREQKKEKSVSGRKD HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC KDGPPKPGDGEKTPLEPAAVEH CCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIKKRKFREILQPVHKNIIGVRFKKEGKIYSFDAGDLNLKIKDQIIVSTEDGLSMGTVIT CCCHHHHHHHHHHHHHHHEEEEEECCCCEEEECCCCEEEEEECEEEEECCCCCHHHHHHH SITNQPEGNLPPNLKPVVRKVTEEDLLIQKNNKILEKGCFSFCAERIRIRNLPMKLIDVE HHCCCCCCCCCCCHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEE CLFDKSKIIFYFTAENRVDFREIVKDLAQKYKTKIELRQIGARQEARIIKGMGVCGREIC EEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHH CVNLLHNLDRVSVKMAKEQNMSLNPEKISGLCGRLMCCLAYEYDSYREQKKEKSVSGRKD HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC KDGPPKPGDGEKTPLEPAAVEH CCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]