| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85859634
Identifier: 85859634
GI number: 85859634
Start: 1864287
End: 1864940
Strand: Direct
Name: 85859634
Synonym: SYN_02453
Alternate gene names: NA
Gene position: 1864287-1864940 (Clockwise)
Preceding gene: 85859633
Following gene: 85859635
Centisome position: 58.64
GC content: 50.92
Gene sequence:
>654_bases GTGGTGCGCCCTATCCCGTTAAACAAAAGAAGTGAGCGACCCTTGTGTTTGCAGGAGTGTCCCGTGAAGAGAAGATACTG GAACGCTTTCATTGCCCTTTTCCTGATTCTGATGATTTCCGCGTGCGGAGGATTGCGTTATTCACAGGTCGACACCGAGG CCGGAAATTTTCACCCGAGACGTCTGGGTGTTCTTCCCGTCGACGTGGGGACTTACGAAGAAGCACGAGGAACCGTTGAT CAAATGATCGCCGGGGTGCTGACCGAAAAGAAGTGGTTCAACGATGTTGTGGCCGGGGATGACATCAACCGTCAATTCCA TGCGAATGAAGAATTCCGCGCGGTCATGACCGACTACATGGCCAAGCTCAAAACCGTTAATTTTTCCGATCCCCAGCTCA GCGCAAGGATCGGCGAACTGTGTCAGGTTGATTCTTTTCTTGTCGTTTCCGTTGATTATTGGAATTACACGACCGAAAAC GGAGACAAAGTGGGAAAGGTCAGTCTGGGCATCAAAATGATTCAAGCGGAAACGGGAAAAGTCCTTTGGAAGGCGGGCCA TTTCCGGGCAGAAAAATACCGGTTCATCAAACCTGAGCTGCTGAGTGTGGCCAGAACCCTTTTCAGGGAGATGATCGGTT ACATGCCTCGCTGA
Upstream 100 bases:
>100_bases TTTGTTTTAAACTTTGTGATAGAAGGGCGTCGTTTTCCGGGGTTGTTCTGGAGGGTCTTCTGGAAACCAGCTATATTATC GCCGGGTTGAGTTCACTGCT
Downstream 100 bases:
>100_bases ACGAGAGCGAAAAAGTGCGGACAGACGGATTTAACCGTTTGATCCCGAATCGCGAGATGCGGTTCAATCTAAGGGGGTAC ACTCATGAAAGATAAGGTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MVRPIPLNKRSERPLCLQECPVKRRYWNAFIALFLILMISACGGLRYSQVDTEAGNFHPRRLGVLPVDVGTYEEARGTVD QMIAGVLTEKKWFNDVVAGDDINRQFHANEEFRAVMTDYMAKLKTVNFSDPQLSARIGELCQVDSFLVVSVDYWNYTTEN GDKVGKVSLGIKMIQAETGKVLWKAGHFRAEKYRFIKPELLSVARTLFREMIGYMPR
Sequences:
>Translated_217_residues MVRPIPLNKRSERPLCLQECPVKRRYWNAFIALFLILMISACGGLRYSQVDTEAGNFHPRRLGVLPVDVGTYEEARGTVD QMIAGVLTEKKWFNDVVAGDDINRQFHANEEFRAVMTDYMAKLKTVNFSDPQLSARIGELCQVDSFLVVSVDYWNYTTEN GDKVGKVSLGIKMIQAETGKVLWKAGHFRAEKYRFIKPELLSVARTLFREMIGYMPR >Mature_217_residues MVRPIPLNKRSERPLCLQECPVKRRYWNAFIALFLILMISACGGLRYSQVDTEAGNFHPRRLGVLPVDVGTYEEARGTVD QMIAGVLTEKKWFNDVVAGDDINRQFHANEEFRAVMTDYMAKLKTVNFSDPQLSARIGELCQVDSFLVVSVDYWNYTTEN GDKVGKVSLGIKMIQAETGKVLWKAGHFRAEKYRFIKPELLSVARTLFREMIGYMPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24848; Mature: 24848
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRPIPLNKRSERPLCLQECPVKRRYWNAFIALFLILMISACGGLRYSQVDTEAGNFHPR CCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCC RLGVLPVDVGTYEEARGTVDQMIAGVLTEKKWFNDVVAGDDINRQFHANEEFRAVMTDYM EECEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH AKLKTVNFSDPQLSARIGELCQVDSFLVVSVDYWNYTTENGDKVGKVSLGIKMIQAETGK HHHHCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEHHHCEEEEECCCCC VLWKAGHFRAEKYRFIKPELLSVARTLFREMIGYMPR EEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MVRPIPLNKRSERPLCLQECPVKRRYWNAFIALFLILMISACGGLRYSQVDTEAGNFHPR CCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCC RLGVLPVDVGTYEEARGTVDQMIAGVLTEKKWFNDVVAGDDINRQFHANEEFRAVMTDYM EECEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH AKLKTVNFSDPQLSARIGELCQVDSFLVVSVDYWNYTTENGDKVGKVSLGIKMIQAETGK HHHHCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEHHHCEEEEECCCCC VLWKAGHFRAEKYRFIKPELLSVARTLFREMIGYMPR EEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA