Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85859617

Identifier: 85859617

GI number: 85859617

Start: 1845795

End: 1846910

Strand: Direct

Name: 85859617

Synonym: SYN_02000

Alternate gene names: NA

Gene position: 1845795-1846910 (Clockwise)

Preceding gene: 85859615

Following gene: 85859618

Centisome position: 58.06

GC content: 52.6

Gene sequence:

>1116_bases
TTGTGTCAAGGTCTAATGACCCACAGCCGGTGCGTGAAAAGCAATACCATGTTCAGCATTCGTATCAAAGCAGGTCGGAA
AGCCTACGAACAGATTCGTGACGGCGGTTTTTCCTGCGACCGGATTTCTGCTTTTTTCGCTCCCGCAGCCGGTCCACGCT
GGCTTGTTGCTACGGGATTCGATCTGACACTTCTTAAAGCGGGGCTTCTGGGAAGGAAGAAACCGGTTCAGTTGATCGGC
TCGTCTTCCGGTGCCTGGCGTTTTGCCGCCTGGGTGCAGCCGGAAGCAGAAAAGAGCTATCTAAACCTTATGGAAGCTTA
CATCCGTATCCCTTACCATAAGGACGATCGCGCGGGTATAGTCCTGCAAAACCTGATCAATGTCGTCAACTCCTACATTG
AAGATGACGCCCTGCCTTTTGCCCTGGCTCATAAACATTACCGCCTTGCCGTCCTGACCGCCCGCGTGCGGCATCTCGTT
GCTTCGGAATCTTCCTGGATTCAGTCATCCGGATTGTTTCTGTGCTTTCTGATGAACGCCCTGAGCCGATCCACTCTGGA
TCACTTCACGGAGCGGGTCGTTTTTTACAATGGACCGAACCCGCCTGGCTTCTGTCTTAAAAGTCCTTTCCGAGGCCGGT
TTATTCAACTCAATAGAACCAATTTCAAGCATGCAATTCTGGCCTCCGGAGCAATTCCCCTGTTTGTGGCCGGAATTCGC
GATATTTACGGGGCGCCCCGGGGTGTCTACCGGGATGGCGGCCTCGTCGATTATCACCAGACCTATGACTTCGCCGAATC
AGACGATGACATGACTCTCTTTTTCCACCATCAGGAACGTATTATTCCCGGCTGGTTTGACAAGCGTTTGAAGCATCGCA
GAACTCCTGATGTCCTTCTGGACCATACCCTGATGGTTTTTCCCACAGAGGATTTTGTTTCAACCCTTCCTCTTGGAAAG
CTTCCGGACCGGGAGGATTTCAGATCTTTCATGGATGATCCGGCAACGCGCATCCGGAACTGGCAGGAGGCCGTCCGACG
TTCCGCCCCTCTGGGCGAACAGTTTTTTGAGCTGGTTGAAAGCGGCAAGCTCAGATCTATGGTCGAACGGATTTAG

Upstream 100 bases:

>100_bases
ATGTTCATGTAAATAACCCGATCTCTTTAAAGCCGCGCCATGTTTTCATGCAAATTCATCCCTTGCCGACGGCGGTGCTA
CTCTACAAAAATGGATCGGG

Downstream 100 bases:

>100_bases
TTCCTGAGACGAATCAGCTTTGACATCAAGGCGACAACCCCATGATTACACTGTTTAAAGTCGGACAACATTCTAATGTA
CGCAAAGGAAATCGGTTCAT

Product: cytoplasmic protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MCQGLMTHSRCVKSNTMFSIRIKAGRKAYEQIRDGGFSCDRISAFFAPAAGPRWLVATGFDLTLLKAGLLGRKKPVQLIG
SSSGAWRFAAWVQPEAEKSYLNLMEAYIRIPYHKDDRAGIVLQNLINVVNSYIEDDALPFALAHKHYRLAVLTARVRHLV
ASESSWIQSSGLFLCFLMNALSRSTLDHFTERVVFYNGPNPPGFCLKSPFRGRFIQLNRTNFKHAILASGAIPLFVAGIR
DIYGAPRGVYRDGGLVDYHQTYDFAESDDDMTLFFHHQERIIPGWFDKRLKHRRTPDVLLDHTLMVFPTEDFVSTLPLGK
LPDREDFRSFMDDPATRIRNWQEAVRRSAPLGEQFFELVESGKLRSMVERI

Sequences:

>Translated_371_residues
MCQGLMTHSRCVKSNTMFSIRIKAGRKAYEQIRDGGFSCDRISAFFAPAAGPRWLVATGFDLTLLKAGLLGRKKPVQLIG
SSSGAWRFAAWVQPEAEKSYLNLMEAYIRIPYHKDDRAGIVLQNLINVVNSYIEDDALPFALAHKHYRLAVLTARVRHLV
ASESSWIQSSGLFLCFLMNALSRSTLDHFTERVVFYNGPNPPGFCLKSPFRGRFIQLNRTNFKHAILASGAIPLFVAGIR
DIYGAPRGVYRDGGLVDYHQTYDFAESDDDMTLFFHHQERIIPGWFDKRLKHRRTPDVLLDHTLMVFPTEDFVSTLPLGK
LPDREDFRSFMDDPATRIRNWQEAVRRSAPLGEQFFELVESGKLRSMVERI
>Mature_371_residues
MCQGLMTHSRCVKSNTMFSIRIKAGRKAYEQIRDGGFSCDRISAFFAPAAGPRWLVATGFDLTLLKAGLLGRKKPVQLIG
SSSGAWRFAAWVQPEAEKSYLNLMEAYIRIPYHKDDRAGIVLQNLINVVNSYIEDDALPFALAHKHYRLAVLTARVRHLV
ASESSWIQSSGLFLCFLMNALSRSTLDHFTERVVFYNGPNPPGFCLKSPFRGRFIQLNRTNFKHAILASGAIPLFVAGIR
DIYGAPRGVYRDGGLVDYHQTYDFAESDDDMTLFFHHQERIIPGWFDKRLKHRRTPDVLLDHTLMVFPTEDFVSTLPLGK
LPDREDFRSFMDDPATRIRNWQEAVRRSAPLGEQFFELVESGKLRSMVERI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42296; Mature: 42296

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCQGLMTHSRCVKSNTMFSIRIKAGRKAYEQIRDGGFSCDRISAFFAPAAGPRWLVATGF
CCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEECC
DLTLLKAGLLGRKKPVQLIGSSSGAWRFAAWVQPEAEKSYLNLMEAYIRIPYHKDDRAGI
CHHHHHHHHCCCCCCCEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCHH
VLQNLINVVNSYIEDDALPFALAHKHYRLAVLTARVRHLVASESSWIQSSGLFLCFLMNA
HHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHH
LSRSTLDHFTERVVFYNGPNPPGFCLKSPFRGRFIQLNRTNFKHAILASGAIPLFVAGIR
HHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHCCCHHHHHHHHH
DIYGAPRGVYRDGGLVDYHQTYDFAESDDDMTLFFHHQERIIPGWFDKRLKHRRTPDVLL
HHHCCCCCCCCCCCEEEHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCHHH
DHTLMVFPTEDFVSTLPLGKLPDREDFRSFMDDPATRIRNWQEAVRRSAPLGEQFFELVE
CCEEEEEECHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
SGKLRSMVERI
CCHHHHHHHHC
>Mature Secondary Structure
MCQGLMTHSRCVKSNTMFSIRIKAGRKAYEQIRDGGFSCDRISAFFAPAAGPRWLVATGF
CCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEECC
DLTLLKAGLLGRKKPVQLIGSSSGAWRFAAWVQPEAEKSYLNLMEAYIRIPYHKDDRAGI
CHHHHHHHHCCCCCCCEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCHH
VLQNLINVVNSYIEDDALPFALAHKHYRLAVLTARVRHLVASESSWIQSSGLFLCFLMNA
HHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHH
LSRSTLDHFTERVVFYNGPNPPGFCLKSPFRGRFIQLNRTNFKHAILASGAIPLFVAGIR
HHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHCCCHHHHHHHHH
DIYGAPRGVYRDGGLVDYHQTYDFAESDDDMTLFFHHQERIIPGWFDKRLKHRRTPDVLL
HHHCCCCCCCCCCCEEEHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCHHH
DHTLMVFPTEDFVSTLPLGKLPDREDFRSFMDDPATRIRNWQEAVRRSAPLGEQFFELVE
CCEEEEEECHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
SGKLRSMVERI
CCHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA