Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85859603

Identifier: 85859603

GI number: 85859603

Start: 1832659

End: 1835139

Strand: Direct

Name: 85859603

Synonym: SYN_02014

Alternate gene names: NA

Gene position: 1832659-1835139 (Clockwise)

Preceding gene: 85859601

Following gene: 85859605

Centisome position: 57.64

GC content: 45.71

Gene sequence:

>2481_bases
ATGAGCAAACGAATTCTTTCTTCAGGTCAAAAAAACACCACACATATGAAATCCCACAGGCTGATTACTTACCCTGCCAT
TGCTGACAGCGTTGACCTGCCTGATTTCATCTTTCACAAAAGCAGTGACAGGGATGCGTTTATCCTGTTGACCGGGGCTG
AGCAGAAACTCCTCTTTGAACAGAAGAAAGCCACGAACAGAGCAATGGAGCTTGATAATCGCAGGCTGATGACGCTGCTT
TCCCCCATATGGGCAAAGTTCACGAATTCGGATGTCACACTTCATATCATTTCTGAGCGTGGAGCTGTTTTAAAAATCAA
ACAGTTCAGGACTGGAATTGTAATTCAGGCACATTGGAATTTGTTTCAACCCTATTTTTATCAGATCAAGAATCTTCCTA
TCGCCCATTCCGAGATCCTGGATGTTTTTGCACGCGCCGTCTTTAATTACGCGGCTCTGGCCATGAAACATGACGGGATG
GAAAAGAGCGAATTCAGGAATGTCGTGATTGACGCATATATTTTGCAGCCGGAACTTTTGCTTGCTTCGCTGGATATCCT
TAACAAACCCAATATCTACCACATTCACTCGACAAGAATCTGGCTGACCAAGATATCCGAAGCCAATGACAAACATCGTC
TGCAGATTGACGTTTCCGCCGCGGCAGCCAATCCTCTTGTCAGCCTTGGATTCTTAAAAGAAGTGGCCGTTTTCATTCAC
AAGGTTGCGAAAAACTATGCGTTCCGCTACGTGGATTATTTATGGACCCAGCAGTACAGTATTACATGTGATACCCGGCC
GGAACTGAACATGGTGACCCGGGAAGGAAATGTCATTTCGATCAACATTTACCCTCTTCTCAATAAGACCAACTGGAAAC
CGATGCTTTACCTGAGTCTTGGATATGCGATCATGCTCGCTCTACTCGAAGCGTCGGGAGGAGAGGATGAAAAAATAAAC
GTTTATTTATCCATGATGAAGACCTGGAATCGTTATTTGAGTTTTGACGAATCCATGGAGCAGCAATGTGTGCGGGAAAT
CTGCCGGCTGCCTTCGTCCTCCGAAGTAGAAAGCCGCGTTCTGCTGAAATGCATGACGTGCGGGGAAAACATGGAACTGA
TTGATGAATTTATCAGATTGATTGACTATTCCGCACAGGAGACCATTGAGGATAAGTTGAAATTATTGAAGGAAGCCCGT
TCCGGAAACGAAACAGGCGCTCAATATGAGCAGTTATGGGATCGAGTACGCAATCTGAATGCCGGTCTGGTGAAGAATAA
CATCAATTACAGCAAATTTATTGAGGTGCTGCGTAATGACAATATCGATTATATTCAGCTTGCGGATTTATTGCGCACAG
GCCGCCTGGAAAACCGCTGTGTTGTCGATGTGAGCGAATGGCTTTTGTTAAGAACGCTTTTATATGATCTGATCAGTTCG
ACAAAGGTCTTCAGCAACGATTACAAAATGCTTTTGAAGGTTCTGACAAAAGTAAACAAAAGCCTGATTGTATATGTCTG
GACATTGGTTTTTGACAACGATATGCGTCACGAACGGGTCAACACGTATATAGCAAGATTGCTTAATGATATCTTTGTGT
TTAATCGTGTGAAGATCTACGAAATCGTCTCAGATCCAGCAGAATGCCTGGAAACTGAGGCTGTGACCGGGTATCTTCTG
AATTGGGCCGGTCTTTCGCAGGATGAACTGCGTTCGATCAGAAACAAGGTGCCGTTTAACTTGCCGCGCAACATAGTCCC
CTGCTTGAATATCCGGACTGCAGGAGATGTGGATCATCTGGTTCGCGTAATGACGATCCGCTCCAGTGGAATCATTGGCT
TCTGTCTGCACAAGGTTTATCAATGGGGAAGCATGCAGGATGAACTCACAGGAAAAATCCGTTCCCATTTTCCCGAACTT
CTTCAAAAGGCCCAGGATGCCATGCATCCTCGAAAGATCATCATGGGGGGAGCCATGCTTCTTCTGGTTTTGGCTCAGAC
CATTTCCGACCAGCGTGACGGGTTTGCGCAAAATGTTGCCATTAAAGAAGAAGACAGGCAGATCGTTCTCAATCTGATCA
AGCAGTGCATCGATTGGGACCAGCGGCATTACATCATGATGGTCGGGGGGATTGCGGCTGGTTATCTGGGAATCATCGAT
GGATGGATACTGCGCCAGTTCGACATCCTGCTGGGTCGTTATGGTGGCGGAGATCGTGTGGTATTGCGCAGTGTTGTGCA
GTTTGATGTCGAAAATCTGATTCAAAGGACTCTAATTACAGCTAAGGAGGGAAAAGAAAGCGAGCTGCTGAAAAAGATTC
AGCTGCTTCGTCTTGGGGTTGATCCCGTCATAAGCGATCAAGTCAATAAATTTTTCGGAACGTTGGCTTGCCGCTACGGA
ATTTCCGCGGCGGAAGTTGCTTTGAAGAAAAAAGATATCGGTGAACTGATTCTGGAATTATCCCGTCGAATGAAAGCCTG
A

Upstream 100 bases:

>100_bases
TGTGTATAGTGCGGTATTAAAACAGCATTGAAGAAATTATACACCGGCCGGGTTCCACGTAATTTTCCGGTTTTTTAATT
CGAGATCAGGAGACCCACCA

Downstream 100 bases:

>100_bases
ATATGGGGCGTCAGCTGAAAACAGGAAATCAAATTCCACCTGCAAACAAGCGTGATATAACGATCTTCAGCCTTTCAATA
CGCGAGTCGGCATCGCCTCC

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 826; Mature: 825

Protein sequence:

>826_residues
MSKRILSSGQKNTTHMKSHRLITYPAIADSVDLPDFIFHKSSDRDAFILLTGAEQKLLFEQKKATNRAMELDNRRLMTLL
SPIWAKFTNSDVTLHIISERGAVLKIKQFRTGIVIQAHWNLFQPYFYQIKNLPIAHSEILDVFARAVFNYAALAMKHDGM
EKSEFRNVVIDAYILQPELLLASLDILNKPNIYHIHSTRIWLTKISEANDKHRLQIDVSAAAANPLVSLGFLKEVAVFIH
KVAKNYAFRYVDYLWTQQYSITCDTRPELNMVTREGNVISINIYPLLNKTNWKPMLYLSLGYAIMLALLEASGGEDEKIN
VYLSMMKTWNRYLSFDESMEQQCVREICRLPSSSEVESRVLLKCMTCGENMELIDEFIRLIDYSAQETIEDKLKLLKEAR
SGNETGAQYEQLWDRVRNLNAGLVKNNINYSKFIEVLRNDNIDYIQLADLLRTGRLENRCVVDVSEWLLLRTLLYDLISS
TKVFSNDYKMLLKVLTKVNKSLIVYVWTLVFDNDMRHERVNTYIARLLNDIFVFNRVKIYEIVSDPAECLETEAVTGYLL
NWAGLSQDELRSIRNKVPFNLPRNIVPCLNIRTAGDVDHLVRVMTIRSSGIIGFCLHKVYQWGSMQDELTGKIRSHFPEL
LQKAQDAMHPRKIIMGGAMLLLVLAQTISDQRDGFAQNVAIKEEDRQIVLNLIKQCIDWDQRHYIMMVGGIAAGYLGIID
GWILRQFDILLGRYGGGDRVVLRSVVQFDVENLIQRTLITAKEGKESELLKKIQLLRLGVDPVISDQVNKFFGTLACRYG
ISAAEVALKKKDIGELILELSRRMKA

Sequences:

>Translated_826_residues
MSKRILSSGQKNTTHMKSHRLITYPAIADSVDLPDFIFHKSSDRDAFILLTGAEQKLLFEQKKATNRAMELDNRRLMTLL
SPIWAKFTNSDVTLHIISERGAVLKIKQFRTGIVIQAHWNLFQPYFYQIKNLPIAHSEILDVFARAVFNYAALAMKHDGM
EKSEFRNVVIDAYILQPELLLASLDILNKPNIYHIHSTRIWLTKISEANDKHRLQIDVSAAAANPLVSLGFLKEVAVFIH
KVAKNYAFRYVDYLWTQQYSITCDTRPELNMVTREGNVISINIYPLLNKTNWKPMLYLSLGYAIMLALLEASGGEDEKIN
VYLSMMKTWNRYLSFDESMEQQCVREICRLPSSSEVESRVLLKCMTCGENMELIDEFIRLIDYSAQETIEDKLKLLKEAR
SGNETGAQYEQLWDRVRNLNAGLVKNNINYSKFIEVLRNDNIDYIQLADLLRTGRLENRCVVDVSEWLLLRTLLYDLISS
TKVFSNDYKMLLKVLTKVNKSLIVYVWTLVFDNDMRHERVNTYIARLLNDIFVFNRVKIYEIVSDPAECLETEAVTGYLL
NWAGLSQDELRSIRNKVPFNLPRNIVPCLNIRTAGDVDHLVRVMTIRSSGIIGFCLHKVYQWGSMQDELTGKIRSHFPEL
LQKAQDAMHPRKIIMGGAMLLLVLAQTISDQRDGFAQNVAIKEEDRQIVLNLIKQCIDWDQRHYIMMVGGIAAGYLGIID
GWILRQFDILLGRYGGGDRVVLRSVVQFDVENLIQRTLITAKEGKESELLKKIQLLRLGVDPVISDQVNKFFGTLACRYG
ISAAEVALKKKDIGELILELSRRMKA
>Mature_825_residues
SKRILSSGQKNTTHMKSHRLITYPAIADSVDLPDFIFHKSSDRDAFILLTGAEQKLLFEQKKATNRAMELDNRRLMTLLS
PIWAKFTNSDVTLHIISERGAVLKIKQFRTGIVIQAHWNLFQPYFYQIKNLPIAHSEILDVFARAVFNYAALAMKHDGME
KSEFRNVVIDAYILQPELLLASLDILNKPNIYHIHSTRIWLTKISEANDKHRLQIDVSAAAANPLVSLGFLKEVAVFIHK
VAKNYAFRYVDYLWTQQYSITCDTRPELNMVTREGNVISINIYPLLNKTNWKPMLYLSLGYAIMLALLEASGGEDEKINV
YLSMMKTWNRYLSFDESMEQQCVREICRLPSSSEVESRVLLKCMTCGENMELIDEFIRLIDYSAQETIEDKLKLLKEARS
GNETGAQYEQLWDRVRNLNAGLVKNNINYSKFIEVLRNDNIDYIQLADLLRTGRLENRCVVDVSEWLLLRTLLYDLISST
KVFSNDYKMLLKVLTKVNKSLIVYVWTLVFDNDMRHERVNTYIARLLNDIFVFNRVKIYEIVSDPAECLETEAVTGYLLN
WAGLSQDELRSIRNKVPFNLPRNIVPCLNIRTAGDVDHLVRVMTIRSSGIIGFCLHKVYQWGSMQDELTGKIRSHFPELL
QKAQDAMHPRKIIMGGAMLLLVLAQTISDQRDGFAQNVAIKEEDRQIVLNLIKQCIDWDQRHYIMMVGGIAAGYLGIIDG
WILRQFDILLGRYGGGDRVVLRSVVQFDVENLIQRTLITAKEGKESELLKKIQLLRLGVDPVISDQVNKFFGTLACRYGI
SAAEVALKKKDIGELILELSRRMKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 94888; Mature: 94757

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRILSSGQKNTTHMKSHRLITYPAIADSVDLPDFIFHKSSDRDAFILLTGAEQKLLFE
CCCCCCCCCCCCCHHHHCCEEEEECCCCCCCCCCHHHHCCCCCCCEEEEEECCCHHHHHH
QKKATNRAMELDNRRLMTLLSPIWAKFTNSDVTLHIISERGAVLKIKQFRTGIVIQAHWN
HHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCEEEEECCC
LFQPYFYQIKNLPIAHSEILDVFARAVFNYAALAMKHDGMEKSEFRNVVIDAYILQPELL
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEHEECHHHH
LASLDILNKPNIYHIHSTRIWLTKISEANDKHRLQIDVSAAAANPLVSLGFLKEVAVFIH
HHHHHHCCCCCEEEEECCEEEEEEECCCCCCEEEEEEEEHHCCCCHHHHHHHHHHHHHHH
KVAKNYAFRYVDYLWTQQYSITCDTRPELNMVTREGNVISINIYPLLNKTNWKPMLYLSL
HHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCEEEEEEEEEECCCCCCEEEEHHH
GYAIMLALLEASGGEDEKINVYLSMMKTWNRYLSFDESMEQQCVREICRLPSSSEVESRV
HHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHH
LLKCMTCGENMELIDEFIRLIDYSAQETIEDKLKLLKEARSGNETGAQYEQLWDRVRNLN
HHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
AGLVKNNINYSKFIEVLRNDNIDYIQLADLLRTGRLENRCVVDVSEWLLLRTLLYDLISS
CCCEECCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHC
TKVFSNDYKMLLKVLTKVNKSLIVYVWTLVFDNDMRHERVNTYIARLLNDIFVFNRVKIY
CHHHHHHHHHHHHHHHHHCCHHEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEE
EIVSDPAECLETEAVTGYLLNWAGLSQDELRSIRNKVPFNLPRNIVPCLNIRTAGDVDHL
HHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH
VRVMTIRSSGIIGFCLHKVYQWGSMQDELTGKIRSHFPELLQKAQDAMHPRKIIMGGAML
HHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LLVLAQTISDQRDGFAQNVAIKEEDRQIVLNLIKQCIDWDQRHYIMMVGGIAAGYLGIID
HHHHHHHHHHHHCCHHHCCEECHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHH
GWILRQFDILLGRYGGGDRVVLRSVVQFDVENLIQRTLITAKEGKESELLKKIQLLRLGV
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
DPVISDQVNKFFGTLACRYGISAAEVALKKKDIGELILELSRRMKA
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKRILSSGQKNTTHMKSHRLITYPAIADSVDLPDFIFHKSSDRDAFILLTGAEQKLLFE
CCCCCCCCCCCCHHHHCCEEEEECCCCCCCCCCHHHHCCCCCCCEEEEEECCCHHHHHH
QKKATNRAMELDNRRLMTLLSPIWAKFTNSDVTLHIISERGAVLKIKQFRTGIVIQAHWN
HHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCEEEEECCC
LFQPYFYQIKNLPIAHSEILDVFARAVFNYAALAMKHDGMEKSEFRNVVIDAYILQPELL
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEHEECHHHH
LASLDILNKPNIYHIHSTRIWLTKISEANDKHRLQIDVSAAAANPLVSLGFLKEVAVFIH
HHHHHHCCCCCEEEEECCEEEEEEECCCCCCEEEEEEEEHHCCCCHHHHHHHHHHHHHHH
KVAKNYAFRYVDYLWTQQYSITCDTRPELNMVTREGNVISINIYPLLNKTNWKPMLYLSL
HHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCEEEEEEEEEECCCCCCEEEEHHH
GYAIMLALLEASGGEDEKINVYLSMMKTWNRYLSFDESMEQQCVREICRLPSSSEVESRV
HHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHH
LLKCMTCGENMELIDEFIRLIDYSAQETIEDKLKLLKEARSGNETGAQYEQLWDRVRNLN
HHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
AGLVKNNINYSKFIEVLRNDNIDYIQLADLLRTGRLENRCVVDVSEWLLLRTLLYDLISS
CCCEECCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHC
TKVFSNDYKMLLKVLTKVNKSLIVYVWTLVFDNDMRHERVNTYIARLLNDIFVFNRVKIY
CHHHHHHHHHHHHHHHHHCCHHEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEE
EIVSDPAECLETEAVTGYLLNWAGLSQDELRSIRNKVPFNLPRNIVPCLNIRTAGDVDHL
HHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH
VRVMTIRSSGIIGFCLHKVYQWGSMQDELTGKIRSHFPELLQKAQDAMHPRKIIMGGAML
HHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LLVLAQTISDQRDGFAQNVAIKEEDRQIVLNLIKQCIDWDQRHYIMMVGGIAAGYLGIID
HHHHHHHHHHHHCCHHHCCEECHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHH
GWILRQFDILLGRYGGGDRVVLRSVVQFDVENLIQRTLITAKEGKESELLKKIQLLRLGV
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
DPVISDQVNKFFGTLACRYGISAAEVALKKKDIGELILELSRRMKA
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA