Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

Click here to switch to the map view.

The map label for this gene is 85859601

Identifier: 85859601

GI number: 85859601

Start: 1832144

End: 1832386

Strand: Direct

Name: 85859601

Synonym: SYN_02015

Alternate gene names: NA

Gene position: 1832144-1832386 (Clockwise)

Preceding gene: 85859599

Following gene: 85859603

Centisome position: 57.63

GC content: 40.74

Gene sequence:

>243_bases
TTGTCCCGGAAATATTTTTCCGTTCCAGAGGAAGATTTCGGTCGGCTTTCGTCGGTGCGGGAATCAGGGCGTTGTCTTAT
TTCCCGGCGACATAATTCAATTCTTTTTCCCAATTTTATTGCATTATATCCTTCCTTACCCATTACCTCAATGTCGTATT
TCAGGAACTGTCCTGCATCAGATACAATTTTTTACCTTAAATTTATTGCCAGTGAGGATGCAGGCCGATATAACCATTCA
TAA

Upstream 100 bases:

>100_bases
AGCCTTATAGGTTTCCTGTTTTTCATTTCCGACCTGGAGTTTGTCAGACTATCTTTATCAGTGTGTAGTTTCATGAGATT
TTTCATTCTGTACCTGAAAT

Downstream 100 bases:

>100_bases
GGTGATTGATTCTTTTTCCCCCTTCCCTTCTTTATAGCCCGTCTTGACCGGCTTGATTATCAGGATATCAAGAGCTTCTA
CAGGAACCGCAGAATTTTTT

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 79

Protein sequence:

>80_residues
MSRKYFSVPEEDFGRLSSVRESGRCLISRRHNSILFPNFIALYPSLPITSMSYFRNCPASDTIFYLKFIASEDAGRYNHS

Sequences:

>Translated_80_residues
MSRKYFSVPEEDFGRLSSVRESGRCLISRRHNSILFPNFIALYPSLPITSMSYFRNCPASDTIFYLKFIASEDAGRYNHS
>Mature_79_residues
SRKYFSVPEEDFGRLSSVRESGRCLISRRHNSILFPNFIALYPSLPITSMSYFRNCPASDTIFYLKFIASEDAGRYNHS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9263; Mature: 9131

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRKYFSVPEEDFGRLSSVRESGRCLISRRHNSILFPNFIALYPSLPITSMSYFRNCPAS
CCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCEECCHHHHHCCCCCCCHHHHHHCCCCC
DTIFYLKFIASEDAGRYNHS
CCEEEEEEECCCCCCCCCCC
>Mature Secondary Structure 
SRKYFSVPEEDFGRLSSVRESGRCLISRRHNSILFPNFIALYPSLPITSMSYFRNCPAS
CCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCEECCHHHHHCCCCCCCHHHHHHCCCCC
DTIFYLKFIASEDAGRYNHS
CCEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA