Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85859531

Identifier: 85859531

GI number: 85859531

Start: 1756226

End: 1757128

Strand: Direct

Name: 85859531

Synonym: SYN_01873

Alternate gene names: NA

Gene position: 1756226-1757128 (Clockwise)

Preceding gene: 85859530

Following gene: 85859532

Centisome position: 55.24

GC content: 58.47

Gene sequence:

>903_bases
TTGCCTGTCCGCTCTTCTGAGAAGAAATTGATGTTCCGGGTCCTGATCATTTGCCAGGTTGTCCTTCTTTTCACGACGGG
CACCCCTTGCGCCGGGGAACCGCCGTTCATGGAGGAAAACGGCAAGGCGTATTACGGGGACGCCAAGCGGGGCTGGTGGT
GGTACGAGAAGATCCCCTTGGAGAAAAGGGACCGGGACGAGAAAGTCGAGGACGGTAAGAAGCGCTCTCCGCGCCTTTCG
GACTACACAATGGAGGAACTCTGGAATATGTACCCCGACGATTTCCAGGCCGTCCTCATGGCCTTCCAGAAGAAGGCCGT
CCAGGTCCCCTCGGAAAATAACGTGAGGGAATATTACGTGGTCCAGGACATCGCCCGGAGAAAGTCCCTCGCCTTCGCCA
ACGTGTCCGCGGCGGTCATGCAGAAATACCCGGACCTCTCCGTGGCGGCCGACTACCCGATCACGGCCCCGGGAAGAAAC
GCCGAGGTCTCGCAACGGACGGACGAGATCAAATCAAGGATCCGGAGCGCCCGGGAAGAATTCGCGCTCATCTATTTTTC
CTCTGCGGGCTGCCCGTACTGTGCCGAGGAGGGTTCGATTCTCAGCCGTTTCGTCGAGAAGTACGGGTGGGAGATCCGGG
AAATCGACATAGAAAGGGAGGCGGCGGTATCGTCCGTCTTCGGGATCGAGACGACTCCGACCCTTCTTCTCATTTATCGT
GGGAGCGCCGACCATATCACCGTTTCGGCCGGAGTGGCATCCCTGGCCGAGCTCGAGGAAAAACTCTACCGGGGACTCCG
GCTTTTGAAAAACGAGATCACCCCGGAGGAGTATTCTCTCTACGAGTTCCAGCGGGGCGGCGCCTTCGATGTGAAGGCTC
CCTTGAGGCGGGACAAAAGATAA

Upstream 100 bases:

>100_bases
GGGAAGATCCCGGTGGACGCGGTGTTCGTCACGGGACAACACCGGGACAGCTTCGATTCGAGGTATTTCGGATTCGTGAG
AAATGAGGAGGTGAAGGCCG

Downstream 100 bases:

>100_bases
AAGCGAAGGTGTGGCTATGAATAAAGGAATTATTCTCAAAAGCATCGTGGTCCTTGTAATTATTGCTCTCCTCCTGTCGC
CCCTTGGCCCGGACGGGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: Thioredoxin-Related Domain Protein; Thioredoxin-Related Protein; Glutaredoxin

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MPVRSSEKKLMFRVLIICQVVLLFTTGTPCAGEPPFMEENGKAYYGDAKRGWWWYEKIPLEKRDRDEKVEDGKKRSPRLS
DYTMEELWNMYPDDFQAVLMAFQKKAVQVPSENNVREYYVVQDIARRKSLAFANVSAAVMQKYPDLSVAADYPITAPGRN
AEVSQRTDEIKSRIRSAREEFALIYFSSAGCPYCAEEGSILSRFVEKYGWEIREIDIEREAAVSSVFGIETTPTLLLIYR
GSADHITVSAGVASLAELEEKLYRGLRLLKNEITPEEYSLYEFQRGGAFDVKAPLRRDKR

Sequences:

>Translated_300_residues
MPVRSSEKKLMFRVLIICQVVLLFTTGTPCAGEPPFMEENGKAYYGDAKRGWWWYEKIPLEKRDRDEKVEDGKKRSPRLS
DYTMEELWNMYPDDFQAVLMAFQKKAVQVPSENNVREYYVVQDIARRKSLAFANVSAAVMQKYPDLSVAADYPITAPGRN
AEVSQRTDEIKSRIRSAREEFALIYFSSAGCPYCAEEGSILSRFVEKYGWEIREIDIEREAAVSSVFGIETTPTLLLIYR
GSADHITVSAGVASLAELEEKLYRGLRLLKNEITPEEYSLYEFQRGGAFDVKAPLRRDKR
>Mature_299_residues
PVRSSEKKLMFRVLIICQVVLLFTTGTPCAGEPPFMEENGKAYYGDAKRGWWWYEKIPLEKRDRDEKVEDGKKRSPRLSD
YTMEELWNMYPDDFQAVLMAFQKKAVQVPSENNVREYYVVQDIARRKSLAFANVSAAVMQKYPDLSVAADYPITAPGRNA
EVSQRTDEIKSRIRSAREEFALIYFSSAGCPYCAEEGSILSRFVEKYGWEIREIDIEREAAVSSVFGIETTPTLLLIYRG
SADHITVSAGVASLAELEEKLYRGLRLLKNEITPEEYSLYEFQRGGAFDVKAPLRRDKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34412; Mature: 34280

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: PS00194 THIOREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVRSSEKKLMFRVLIICQVVLLFTTGTPCAGEPPFMEENGKAYYGDAKRGWWWYEKIPL
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCC
EKRDRDEKVEDGKKRSPRLSDYTMEELWNMYPDDFQAVLMAFQKKAVQVPSENNVREYYV
CCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHH
VQDIARRKSLAFANVSAAVMQKYPDLSVAADYPITAPGRNAEVSQRTDEIKSRIRSAREE
HHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
FALIYFSSAGCPYCAEEGSILSRFVEKYGWEIREIDIEREAAVSSVFGIETTPTLLLIYR
EEEEEECCCCCCCCCCCHHHHHHHHHHHCCEEEEECCHHHHHHHHHHCCCCCCEEEEEEE
GSADHITVSAGVASLAELEEKLYRGLRLLKNEITPEEYSLYEFQRGGAFDVKAPLRRDKR
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHCCCC
>Mature Secondary Structure 
PVRSSEKKLMFRVLIICQVVLLFTTGTPCAGEPPFMEENGKAYYGDAKRGWWWYEKIPL
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCC
EKRDRDEKVEDGKKRSPRLSDYTMEELWNMYPDDFQAVLMAFQKKAVQVPSENNVREYYV
CCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHH
VQDIARRKSLAFANVSAAVMQKYPDLSVAADYPITAPGRNAEVSQRTDEIKSRIRSAREE
HHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
FALIYFSSAGCPYCAEEGSILSRFVEKYGWEIREIDIEREAAVSSVFGIETTPTLLLIYR
EEEEEECCCCCCCCCCCHHHHHHHHHHHCCEEEEECCHHHHHHHHHHCCCCCCEEEEEEE
GSADHITVSAGVASLAELEEKLYRGLRLLKNEITPEEYSLYEFQRGGAFDVKAPLRRDKR
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA