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The map label for this gene is 85859530

Identifier: 85859530

GI number: 85859530

Start: 1755760

End: 1756245

Strand: Direct

Name: 85859530

Synonym: SYN_01872

Alternate gene names: NA

Gene position: 1755760-1756245 (Clockwise)

Preceding gene: 85859529

Following gene: 85859531

Centisome position: 55.22

GC content: 56.38

Gene sequence:

>486_bases
TTGTCCGAAACGCGAAAACCATCAGGCCTTAGGCTCATTCTCTTCATGGGAGCTCTCGCCGCGGCGGGGATGCTCATTCC
CTCACGCTTCGCTGTGAGCATCACGCCTTCGACGGAACACAGGATCTTTTTTCTGAAAAAAGGGCCGCCCACGGGAGAAC
TGAAAAGAGGCGCTTACGTGATGTTTGATATCAGGTCGAAATACGTCGACCATGGGACGCCCCACCGGGTCATCAAGAGA
ATTGCCTGCGCCGGGGGAGAGGAACTCGACACCGTCGGCCATGACTTTTACTGCGATGGAAGGGAAATCGCGGTGGCGAA
GGATCTTTCCCTCAAGGGAGAGGAGCTTCCCCGGTTTCACTACAGCGGGAAGATCCCGGTGGACGCGGTGTTCGTCACGG
GACAACACCGGGACAGCTTCGATTCGAGGTATTTCGGATTCGTGAGAAATGAGGAGGTGAAGGCCGTTGCCTGTCCGCTC
TTCTGA

Upstream 100 bases:

>100_bases
GGAAAGATTGACGACGACCAGTTGAGGAAAAACATCGAGTCGCTGGAAAAAGCGATCGAAGGTATCCCCTCGAACGAGGT
CGTGATCATGGGGGACGCCG

Downstream 100 bases:

>100_bases
GAAGAAATTGATGTTCCGGGTCCTGATCATTTGCCAGGTTGTCCTTCTTTTCACGACGGGCACCCCTTGCGCCGGGGAAC
CGCCGTTCATGGAGGAAAAC

Product: type IV secretory protease

Products: NA

Alternate protein names: Type IV Secretory Pathway Protease TraF; TrbI Protein

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MSETRKPSGLRLILFMGALAAAGMLIPSRFAVSITPSTEHRIFFLKKGPPTGELKRGAYVMFDIRSKYVDHGTPHRVIKR
IACAGGEELDTVGHDFYCDGREIAVAKDLSLKGEELPRFHYSGKIPVDAVFVTGQHRDSFDSRYFGFVRNEEVKAVACPL
F

Sequences:

>Translated_161_residues
MSETRKPSGLRLILFMGALAAAGMLIPSRFAVSITPSTEHRIFFLKKGPPTGELKRGAYVMFDIRSKYVDHGTPHRVIKR
IACAGGEELDTVGHDFYCDGREIAVAKDLSLKGEELPRFHYSGKIPVDAVFVTGQHRDSFDSRYFGFVRNEEVKAVACPL
F
>Mature_160_residues
SETRKPSGLRLILFMGALAAAGMLIPSRFAVSITPSTEHRIFFLKKGPPTGELKRGAYVMFDIRSKYVDHGTPHRVIKRI
ACAGGEELDTVGHDFYCDGREIAVAKDLSLKGEELPRFHYSGKIPVDAVFVTGQHRDSFDSRYFGFVRNEEVKAVACPLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17937; Mature: 17806

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETRKPSGLRLILFMGALAAAGMLIPSRFAVSITPSTEHRIFFLKKGPPTGELKRGAYV
CCCCCCCCCCCHHHHHHHHHHHCEECCCCEEEEECCCCCEEEEEEECCCCCCCCCCCEEE
MFDIRSKYVDHGTPHRVIKRIACAGGEELDTVGHDFYCDGREIAVAKDLSLKGEELPRFH
EEEECHHHCCCCCHHHHHHHHHHCCCCCCHHCCCCEEECCCEEEEEECCCCCCCCCCCEE
YSGKIPVDAVFVTGQHRDSFDSRYFGFVRNEEVKAVACPLF
CCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCEEEECCCC
>Mature Secondary Structure 
SETRKPSGLRLILFMGALAAAGMLIPSRFAVSITPSTEHRIFFLKKGPPTGELKRGAYV
CCCCCCCCCCHHHHHHHHHHHCEECCCCEEEEECCCCCEEEEEEECCCCCCCCCCCEEE
MFDIRSKYVDHGTPHRVIKRIACAGGEELDTVGHDFYCDGREIAVAKDLSLKGEELPRFH
EEEECHHHCCCCCHHHHHHHHHHCCCCCCHHCCCCEEECCCEEEEEECCCCCCCCCCCEE
YSGKIPVDAVFVTGQHRDSFDSRYFGFVRNEEVKAVACPLF
CCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA