| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85859412
Identifier: 85859412
GI number: 85859412
Start: 1618673
End: 1619326
Strand: Direct
Name: 85859412
Synonym: SYN_02934
Alternate gene names: NA
Gene position: 1618673-1619326 (Clockwise)
Preceding gene: 85859408
Following gene: 85859413
Centisome position: 50.91
GC content: 43.88
Gene sequence:
>654_bases ATGTCAAATTCAAACATAATCCGATTTCATTTTCACATTGTGCGTTCGGAATTTCATCAGGCAGGCAGAAATCATGTTCA CATAAAATTCTTGTATTTTGATCAGCGATGCCGATATAATTTTGTGCTTATTTTAAACAGAGACAAGAGGGCTTCTCAGG TGAAGATTGGTGTGATTTCGGATACCCATCTGCCCGGCTGCGATGAAAAGCTGAAAAGAATTGTCGACCGGTATTTTCAC GATGTGGACATGATTATCCATGCCGGGGATCTTGTGGATATCCGTGTTCTGGATGCATTTGGCGACAGGCAGGTCAGGGC GGTTTGTGGAAATATGGATAACCTTTCGGTTCGACAGCGTCTTCCGGATCGTTTGATTCTTGACATCCAGGGATTTCATC TGGGAGTAATGCACGGCTGGGGAACAGCCGAGAACCTTGAAGAGAAGATATATCATCTTCTTGGTCCCGTGGACTGTCTC ATCTACGGGCATACACATTATCCTGTAAACAGAGTGAAAGAGGGGGTGCTCTTTTTTAATCCGGGATCGGCATTGGATAA ACGGTTCACTCGGGAAAATACGTTGGGAATTCTGAAGATCGGGGATCGGATCACAGGGGAAATCATCAAAATTGAAATTG AAAAAGAACAATGA
Upstream 100 bases:
>100_bases CAGATTCAGAATGGTTTCCGATATTTTATCCAGCGAAGACTCAAGCATGATCAAACTCCAGCAAATATATTCGCGCCAAT TTAGAACAGCCATAACCGAT
Downstream 100 bases:
>100_bases ATACCGTAATAGTAAGAGTCCGGCTGTTCAAGGATAGGGATTCTTTTGACACTGCCTGCGGGTGGCGACAGTAGAATCCG CATCGTTTTTAATGTCAGAT
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MSNSNIIRFHFHIVRSEFHQAGRNHVHIKFLYFDQRCRYNFVLILNRDKRASQVKIGVISDTHLPGCDEKLKRIVDRYFH DVDMIIHAGDLVDIRVLDAFGDRQVRAVCGNMDNLSVRQRLPDRLILDIQGFHLGVMHGWGTAENLEEKIYHLLGPVDCL IYGHTHYPVNRVKEGVLFFNPGSALDKRFTRENTLGILKIGDRITGEIIKIEIEKEQ
Sequences:
>Translated_217_residues MSNSNIIRFHFHIVRSEFHQAGRNHVHIKFLYFDQRCRYNFVLILNRDKRASQVKIGVISDTHLPGCDEKLKRIVDRYFH DVDMIIHAGDLVDIRVLDAFGDRQVRAVCGNMDNLSVRQRLPDRLILDIQGFHLGVMHGWGTAENLEEKIYHLLGPVDCL IYGHTHYPVNRVKEGVLFFNPGSALDKRFTRENTLGILKIGDRITGEIIKIEIEKEQ >Mature_216_residues SNSNIIRFHFHIVRSEFHQAGRNHVHIKFLYFDQRCRYNFVLILNRDKRASQVKIGVISDTHLPGCDEKLKRIVDRYFHD VDMIIHAGDLVDIRVLDAFGDRQVRAVCGNMDNLSVRQRLPDRLILDIQGFHLGVMHGWGTAENLEEKIYHLLGPVDCLI YGHTHYPVNRVKEGVLFFNPGSALDKRFTRENTLGILKIGDRITGEIIKIEIEKEQ
Specific function: Unknown
COG id: COG0622
COG function: function code R; Predicted phosphoesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallophosphoesterase superfamily. YfcE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 - InterPro: IPR020935 - InterPro: IPR000979 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 25183; Mature: 25052
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSNIIRFHFHIVRSEFHQAGRNHVHIKFLYFDQRCRYNFVLILNRDKRASQVKIGVIS CCCCCEEEEEEEEHHHHHHHCCCCEEEEEEEEEECCCCEEEEEEEECCCCCCEEEEEEEE DTHLPGCDEKLKRIVDRYFHDVDMIIHAGDLVDIRVLDAFGDRQVRAVCGNMDNLSVRQR CCCCCCHHHHHHHHHHHHHCCEEEEEECCCEEEEEEEECCCCCEEEHHHCCCCCCHHHHH LPDRLILDIQGFHLGVMHGWGTAENLEEKIYHLLGPVDCLIYGHTHYPVNRVKEGVLFFN CCCEEEEEECCEEEEEEECCCCHHHHHHHHHHHHCCEEEEEECCCCCCHHHHCCCEEEEC PGSALDKRFTRENTLGILKIGDRITGEIIKIEIEKEQ CCCHHHHHHCCCCCEEEEEECCCCCCEEEEEEEECCC >Mature Secondary Structure SNSNIIRFHFHIVRSEFHQAGRNHVHIKFLYFDQRCRYNFVLILNRDKRASQVKIGVIS CCCCEEEEEEEEHHHHHHHCCCCEEEEEEEEEECCCCEEEEEEEECCCCCCEEEEEEEE DTHLPGCDEKLKRIVDRYFHDVDMIIHAGDLVDIRVLDAFGDRQVRAVCGNMDNLSVRQR CCCCCCHHHHHHHHHHHHHCCEEEEEECCCEEEEEEEECCCCCEEEHHHCCCCCCHHHHH LPDRLILDIQGFHLGVMHGWGTAENLEEKIYHLLGPVDCLIYGHTHYPVNRVKEGVLFFN CCCEEEEEECCEEEEEEECCCCHHHHHHHHHHHHCCEEEEEECCCCCCHHHHCCCEEEEC PGSALDKRFTRENTLGILKIGDRITGEIIKIEIEKEQ CCCHHHHHHCCCCCEEEEEECCCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]