| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
Click here to switch to the map view.
The map label for this gene is 85859413
Identifier: 85859413
GI number: 85859413
Start: 1619447
End: 1619932
Strand: Direct
Name: 85859413
Synonym: SYN_02933
Alternate gene names: NA
Gene position: 1619447-1619932 (Clockwise)
Preceding gene: 85859412
Following gene: 85859414
Centisome position: 50.94
GC content: 48.35
Gene sequence:
>486_bases ATGAAATCAATATATGCTCCGTGGCGCATGGCCTATATCAAGGGTAAGAAGGTTGAAGGATGCGTATTCTGCAAGGAATC CGTTCGGGACGATCAATACGTTCTTCTGGAAGGCAAAACGGCTTTTGTCATGCTTAACGCGTATCCATACACCAACGGGC ATCTGATGATCATTCCCTATCGTCATCTCGGCAGCCTGGAATTTCTGCTTCCGGAGGAGAGACTGGAAATGTTTGACCTC GTGGATATTTCGGTAAGGGTATTAAAGGAGGCCATGTGTCCGGACGGTTTCAATATCGGCATCAATCTCGGCAGAGCAGC GGGAGCTGGGATCGAAGATCACATTCATATTCACGTGGTCCCGCGATGGAACGGCGACACCAATTTCATGAGTGTGGTGG GAGGAATACGCGTTATCCCTGATGACATTCTCAAGTGCTGCGAACAAATCAAGTGCCTTTTCGATAAATATCGACCGGAG GAATGA
Upstream 100 bases:
>100_bases CGGCTGTTCAAGGATAGGGATTCTTTTGACACTGCCTGCGGGTGGCGACAGTAGAATCCGCATCGTTTTTAATGTCAGAT ATCGGCAAGGATAATAATTT
Downstream 100 bases:
>100_bases GATGAAGATCCTTTACACAATCATAATCGTTCTGCTGATTCTCTTTGTCGTTACCTTTTCCCTGCAGAATACACTTCAGG TGCGTCTAGTTTATTATGAT
Product: cytoplasmic protein
Products: NA
Alternate protein names: ATP adenylyltransferase; Diadenosine 5',5'''-P1,P4-tetraphosphate phosphorylase; AP,A phosphorylase [H]
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MKSIYAPWRMAYIKGKKVEGCVFCKESVRDDQYVLLEGKTAFVMLNAYPYTNGHLMIIPYRHLGSLEFLLPEERLEMFDL VDISVRVLKEAMCPDGFNIGINLGRAAGAGIEDHIHIHVVPRWNGDTNFMSVVGGIRVIPDDILKCCEQIKCLFDKYRPE E
Sequences:
>Translated_161_residues MKSIYAPWRMAYIKGKKVEGCVFCKESVRDDQYVLLEGKTAFVMLNAYPYTNGHLMIIPYRHLGSLEFLLPEERLEMFDL VDISVRVLKEAMCPDGFNIGINLGRAAGAGIEDHIHIHVVPRWNGDTNFMSVVGGIRVIPDDILKCCEQIKCLFDKYRPE E >Mature_161_residues MKSIYAPWRMAYIKGKKVEGCVFCKESVRDDQYVLLEGKTAFVMLNAYPYTNGHLMIIPYRHLGSLEFLLPEERLEMFDL VDISVRVLKEAMCPDGFNIGINLGRAAGAGIEDHIHIHVVPRWNGDTNFMSVVGGIRVIPDDILKCCEQIKCLFDKYRPE E
Specific function: Catabolizes diadenosine 5',5'''-P1,P4-tetraphosphate (Ap4A) into ADP and ATP. It does not catalyze the reverse phosphorolysis reaction. The optimum substrates are dinucleoside polyphosphates containing four or five phosphate residues [H]
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HIT domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011146 - InterPro: IPR011151 - InterPro: IPR001310 [H]
Pfam domain/function: PF01230 HIT [H]
EC number: =2.7.7.53 [H]
Molecular weight: Translated: 18398; Mature: 18398
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 8.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSIYAPWRMAYIKGKKVEGCVFCKESVRDDQYVLLEGKTAFVMLNAYPYTNGHLMIIPY CCCCCCCEEEEEEECCCCCEEEEEHHHCCCCCEEEEECCEEEEEEEECCCCCCEEEEEEC RHLGSLEFLLPEERLEMFDLVDISVRVLKEAMCPDGFNIGINLGRAAGAGIEDHIHIHVV CCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEEE PRWNGDTNFMSVVGGIRVIPDDILKCCEQIKCLFDKYRPEE ECCCCCCHHHHHHCCCEECCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKSIYAPWRMAYIKGKKVEGCVFCKESVRDDQYVLLEGKTAFVMLNAYPYTNGHLMIIPY CCCCCCCEEEEEEECCCCCEEEEEHHHCCCCCEEEEECCEEEEEEEECCCCCCEEEEEEC RHLGSLEFLLPEERLEMFDLVDISVRVLKEAMCPDGFNIGINLGRAAGAGIEDHIHIHVV CCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEEE PRWNGDTNFMSVVGGIRVIPDDILKCCEQIKCLFDKYRPEE ECCCCCCHHHHHHCCCEECCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12368430; 12218036 [H]