Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85859115

Identifier: 85859115

GI number: 85859115

Start: 1292937

End: 1293428

Strand: Direct

Name: 85859115

Synonym: SYN_01516

Alternate gene names: NA

Gene position: 1292937-1293428 (Clockwise)

Preceding gene: 85859114

Following gene: 85859116

Centisome position: 40.67

GC content: 57.72

Gene sequence:

>492_bases
ATGAAGCGCTGGTTTGTCTGGCTGTTGATGTCGGCTGTGCTGTGGGGTTGCGCCAGTCCGGGCATGAAGTATGAAACGAT
GCCCGAGGCGGAACGGAATCTGGAAATCAGATACGAACTTGCCGGGCAGAGCCGGGATGCCCTTTTTGACAAAACGCTTG
CCTGGGTGAAAGCCGAGGTCGTCTCCGGTGACGGCCTGCTCGTTCGCTCCGACCGGGCACAGGGTTCGATGACCGCGAAG
GTGATGACCTCCTACAACAGTATGTGGGTCGAAGTGCCTGCCCGATACACGATGCGGGTCGATTTCAAGGACAGCCGCAT
CCGCGTCGTCTGTTACGATTTCGAGGATTTCTGGGGTGAATTCAAGAAAACCGCCAGGCCGGTGGAAGACGCTGACGCCA
TGAGGCAGCTCAAGCAGAAAGCCCAGGAGAAGGCGGACGCCCTGAACTCCTTCCTGACAGGCGGAACTCCCTCAACCGAT
AAAGACTGGTAA

Upstream 100 bases:

>100_bases
TCGGGATTTCGTCCGCGTCACCATAGGAAAGCGGGAGGACATGGCCCGGCTGCTGGAAGAGTTGAAACGGCTGTTCTGAA
GAAAAAGGAGATGAAAAACG

Downstream 100 bases:

>100_bases
GAAAAGAAAAAAACAAAAAAACAGGATAATAAAAAGGGACAGCGTACATTTTTTTAGAAAAAATGGGATGCGTCCCTTTT
TTGTTGTTTATTAAAGTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MKRWFVWLLMSAVLWGCASPGMKYETMPEAERNLEIRYELAGQSRDALFDKTLAWVKAEVVSGDGLLVRSDRAQGSMTAK
VMTSYNSMWVEVPARYTMRVDFKDSRIRVVCYDFEDFWGEFKKTARPVEDADAMRQLKQKAQEKADALNSFLTGGTPSTD
KDW

Sequences:

>Translated_163_residues
MKRWFVWLLMSAVLWGCASPGMKYETMPEAERNLEIRYELAGQSRDALFDKTLAWVKAEVVSGDGLLVRSDRAQGSMTAK
VMTSYNSMWVEVPARYTMRVDFKDSRIRVVCYDFEDFWGEFKKTARPVEDADAMRQLKQKAQEKADALNSFLTGGTPSTD
KDW
>Mature_163_residues
MKRWFVWLLMSAVLWGCASPGMKYETMPEAERNLEIRYELAGQSRDALFDKTLAWVKAEVVSGDGLLVRSDRAQGSMTAK
VMTSYNSMWVEVPARYTMRVDFKDSRIRVVCYDFEDFWGEFKKTARPVEDADAMRQLKQKAQEKADALNSFLTGGTPSTD
KDW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18744; Mature: 18744

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRWFVWLLMSAVLWGCASPGMKYETMPEAERNLEIRYELAGQSRDALFDKTLAWVKAEV
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHEE
VSGDGLLVRSDRAQGSMTAKVMTSYNSMWVEVPARYTMRVDFKDSRIRVVCYDFEDFWGE
ECCCCEEEECCCCCCCHHHHHHHCCCCEEEEECCEEEEEEEECCCEEEEEEECHHHHHHH
FKKTARPVEDADAMRQLKQKAQEKADALNSFLTGGTPSTDKDW
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKRWFVWLLMSAVLWGCASPGMKYETMPEAERNLEIRYELAGQSRDALFDKTLAWVKAEV
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHEE
VSGDGLLVRSDRAQGSMTAKVMTSYNSMWVEVPARYTMRVDFKDSRIRVVCYDFEDFWGE
ECCCCEEEECCCCCCCHHHHHHHCCCCEEEEECCEEEEEEEECCCEEEEEEECHHHHHHH
FKKTARPVEDADAMRQLKQKAQEKADALNSFLTGGTPSTDKDW
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA