| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
Click here to switch to the map view.
The map label for this gene is 85859115
Identifier: 85859115
GI number: 85859115
Start: 1292937
End: 1293428
Strand: Direct
Name: 85859115
Synonym: SYN_01516
Alternate gene names: NA
Gene position: 1292937-1293428 (Clockwise)
Preceding gene: 85859114
Following gene: 85859116
Centisome position: 40.67
GC content: 57.72
Gene sequence:
>492_bases ATGAAGCGCTGGTTTGTCTGGCTGTTGATGTCGGCTGTGCTGTGGGGTTGCGCCAGTCCGGGCATGAAGTATGAAACGAT GCCCGAGGCGGAACGGAATCTGGAAATCAGATACGAACTTGCCGGGCAGAGCCGGGATGCCCTTTTTGACAAAACGCTTG CCTGGGTGAAAGCCGAGGTCGTCTCCGGTGACGGCCTGCTCGTTCGCTCCGACCGGGCACAGGGTTCGATGACCGCGAAG GTGATGACCTCCTACAACAGTATGTGGGTCGAAGTGCCTGCCCGATACACGATGCGGGTCGATTTCAAGGACAGCCGCAT CCGCGTCGTCTGTTACGATTTCGAGGATTTCTGGGGTGAATTCAAGAAAACCGCCAGGCCGGTGGAAGACGCTGACGCCA TGAGGCAGCTCAAGCAGAAAGCCCAGGAGAAGGCGGACGCCCTGAACTCCTTCCTGACAGGCGGAACTCCCTCAACCGAT AAAGACTGGTAA
Upstream 100 bases:
>100_bases TCGGGATTTCGTCCGCGTCACCATAGGAAAGCGGGAGGACATGGCCCGGCTGCTGGAAGAGTTGAAACGGCTGTTCTGAA GAAAAAGGAGATGAAAAACG
Downstream 100 bases:
>100_bases GAAAAGAAAAAAACAAAAAAACAGGATAATAAAAAGGGACAGCGTACATTTTTTTAGAAAAAATGGGATGCGTCCCTTTT TTGTTGTTTATTAAAGTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MKRWFVWLLMSAVLWGCASPGMKYETMPEAERNLEIRYELAGQSRDALFDKTLAWVKAEVVSGDGLLVRSDRAQGSMTAK VMTSYNSMWVEVPARYTMRVDFKDSRIRVVCYDFEDFWGEFKKTARPVEDADAMRQLKQKAQEKADALNSFLTGGTPSTD KDW
Sequences:
>Translated_163_residues MKRWFVWLLMSAVLWGCASPGMKYETMPEAERNLEIRYELAGQSRDALFDKTLAWVKAEVVSGDGLLVRSDRAQGSMTAK VMTSYNSMWVEVPARYTMRVDFKDSRIRVVCYDFEDFWGEFKKTARPVEDADAMRQLKQKAQEKADALNSFLTGGTPSTD KDW >Mature_163_residues MKRWFVWLLMSAVLWGCASPGMKYETMPEAERNLEIRYELAGQSRDALFDKTLAWVKAEVVSGDGLLVRSDRAQGSMTAK VMTSYNSMWVEVPARYTMRVDFKDSRIRVVCYDFEDFWGEFKKTARPVEDADAMRQLKQKAQEKADALNSFLTGGTPSTD KDW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18744; Mature: 18744
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRWFVWLLMSAVLWGCASPGMKYETMPEAERNLEIRYELAGQSRDALFDKTLAWVKAEV CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHEE VSGDGLLVRSDRAQGSMTAKVMTSYNSMWVEVPARYTMRVDFKDSRIRVVCYDFEDFWGE ECCCCEEEECCCCCCCHHHHHHHCCCCEEEEECCEEEEEEEECCCEEEEEEECHHHHHHH FKKTARPVEDADAMRQLKQKAQEKADALNSFLTGGTPSTDKDW HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKRWFVWLLMSAVLWGCASPGMKYETMPEAERNLEIRYELAGQSRDALFDKTLAWVKAEV CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHEE VSGDGLLVRSDRAQGSMTAKVMTSYNSMWVEVPARYTMRVDFKDSRIRVVCYDFEDFWGE ECCCCEEEECCCCCCCHHHHHHHCCCCEEEEECCEEEEEEEECCCEEEEEEECHHHHHHH FKKTARPVEDADAMRQLKQKAQEKADALNSFLTGGTPSTDKDW HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA