| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is hisC
Identifier: 85859114
GI number: 85859114
Start: 1291830
End: 1292915
Strand: Direct
Name: hisC
Synonym: SYN_01517
Alternate gene names: 85859114
Gene position: 1291830-1292915 (Clockwise)
Preceding gene: 85859113
Following gene: 85859115
Centisome position: 40.63
GC content: 57.46
Gene sequence:
>1086_bases TTGAATGCAAAAGGAGAATCCATGCTTTCCCGCAGACTGGAGGCCCTGACCCCCTACGTTCCCGGCGAACAGCCCCGGGA CCGGAAATATCTGAAACTCAACACCAATGAAAATCCCTGGCCCCCGTCGCCGCGCATCGAGGCCCTCCTGCGGGAGTATG ATCCGGACCAGCTGCGCCTCTACCCCGATCCCTGGTCGCTCTCCCTCCGGCAGAAAATAGCCCGGAAGTACAGCGTCGAT GTGGACAACATCTTCGTCGGCAACGGCTCCGACGAGATACTTTCCTTTGTCTGGTACGCCTTCTTCGACGGTCTGTACGG CAAGCTCGTTTTTCCGCAGTTCACCTACAGCTTTTACCCCGTTTACTGCGACTTTTATGAAATACCCTACCGGCGGATTC CGCTCCGACCGGATTTTACTCTCGATCTGGAAGCCATGATCGAAAACGGGGGGGAGCCTTCCTGCGGGATGGCCTTTCCC AATCCCAACGCCCCCACGGGGATCGCCCTGACGCTGAAACAGATCGAGGATCTCCTGAACCGCTATCCGACCGACCGGGT TGTGGTCATCGACGAGGCATACATCGATTTCGGCGGAGAAAGCGCCGTCGGTCTGATCGACCGGTATGCCAATCTTCTTG TCGCCCGGACCTTTTCGAAAAGCTTTTCCCTGGCCGGTCTGCGGCTCGGCTACGCCTTGGGCAGCCCTGAGCTGATCCGG GCCCTGTTCGTGACGAAGGATTCCTTCAATTCCTACACTGTGGGCCGGCTGACGCAGACCATCGGCGAAATCGCCATCGA GGATGAAGCGTGGTTCGCGGAAAAGATTGCCCGCATTATCGAGGCCCGTGATTTTTTTTCGGAGGAACTGAAAGGGCAGG GCTGGCAGGTTCTGCCGTCAAAGGCGAATTTTGTTTTTGTGCGGAAGCCCGGTCTGACGGGGCAGACCATTTATGAGACG CTGAAAGAGCGGGGCATTCTGGTCCGCTATTTTAACGTGGAGGGCATTCGGGATTTCGTCCGCGTCACCATAGGAAAGCG GGAGGACATGGCCCGGCTGCTGGAAGAGTTGAAACGGCTGTTCTGA
Upstream 100 bases:
>100_bases AAGCGGCAAGGCAGAGAGGCGCAGGCCGCGCAGCAGAATGTTGAGGATTCGATAACCAGCCAGGCGAAGAGCGCGCCTTG AAGTGAAATAGAAATAACAG
Downstream 100 bases:
>100_bases AGAAAAAGGAGATGAAAAACGATGAAGCGCTGGTTTGTCTGGCTGTTGATGTCGGCTGTGCTGTGGGGTTGCGCCAGTCC GGGCATGAAGTATGAAACGA
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MNAKGESMLSRRLEALTPYVPGEQPRDRKYLKLNTNENPWPPSPRIEALLREYDPDQLRLYPDPWSLSLRQKIARKYSVD VDNIFVGNGSDEILSFVWYAFFDGLYGKLVFPQFTYSFYPVYCDFYEIPYRRIPLRPDFTLDLEAMIENGGEPSCGMAFP NPNAPTGIALTLKQIEDLLNRYPTDRVVVIDEAYIDFGGESAVGLIDRYANLLVARTFSKSFSLAGLRLGYALGSPELIR ALFVTKDSFNSYTVGRLTQTIGEIAIEDEAWFAEKIARIIEARDFFSEELKGQGWQVLPSKANFVFVRKPGLTGQTIYET LKERGILVRYFNVEGIRDFVRVTIGKREDMARLLEELKRLF
Sequences:
>Translated_361_residues MNAKGESMLSRRLEALTPYVPGEQPRDRKYLKLNTNENPWPPSPRIEALLREYDPDQLRLYPDPWSLSLRQKIARKYSVD VDNIFVGNGSDEILSFVWYAFFDGLYGKLVFPQFTYSFYPVYCDFYEIPYRRIPLRPDFTLDLEAMIENGGEPSCGMAFP NPNAPTGIALTLKQIEDLLNRYPTDRVVVIDEAYIDFGGESAVGLIDRYANLLVARTFSKSFSLAGLRLGYALGSPELIR ALFVTKDSFNSYTVGRLTQTIGEIAIEDEAWFAEKIARIIEARDFFSEELKGQGWQVLPSKANFVFVRKPGLTGQTIYET LKERGILVRYFNVEGIRDFVRVTIGKREDMARLLEELKRLF >Mature_361_residues MNAKGESMLSRRLEALTPYVPGEQPRDRKYLKLNTNENPWPPSPRIEALLREYDPDQLRLYPDPWSLSLRQKIARKYSVD VDNIFVGNGSDEILSFVWYAFFDGLYGKLVFPQFTYSFYPVYCDFYEIPYRRIPLRPDFTLDLEAMIENGGEPSCGMAFP NPNAPTGIALTLKQIEDLLNRYPTDRVVVIDEAYIDFGGESAVGLIDRYANLLVARTFSKSFSLAGLRLGYALGSPELIR ALFVTKDSFNSYTVGRLTQTIGEIAIEDEAWFAEKIARIIEARDFFSEELKGQGWQVLPSKANFVFVRKPGLTGQTIYET LKERGILVRYFNVEGIRDFVRVTIGKREDMARLLEELKRLF
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Homologues:
Organism=Escherichia coli, GI1788332, Length=349, Percent_Identity=26.3610315186246, Blast_Score=111, Evalue=6e-26, Organism=Saccharomyces cerevisiae, GI6322075, Length=356, Percent_Identity=30.0561797752809, Blast_Score=119, Evalue=9e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS8_SYNAS (Q2LST8)
Other databases:
- EMBL: CP000252 - RefSeq: YP_461316.1 - HSSP: Q9X0D0 - ProteinModelPortal: Q2LST8 - SMR: Q2LST8 - STRING: Q2LST8 - GeneID: 3883777 - GenomeReviews: CP000252_GR - KEGG: sat:SYN_01517 - NMPDR: fig|56780.10.peg.1254 - eggNOG: COG0079 - HOGENOM: HBG646350 - OMA: AEMAGYV - PhylomeDB: Q2LST8 - ProtClustDB: PRK05387 - BioCyc: SACI56780:SYN_01517-MONOMER - HAMAP: MF_01023 - InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 - Gene3D: G3DSA:3.40.640.10 - Gene3D: G3DSA:3.90.1150.10 - TIGRFAMs: TIGR01141
Pfam domain/function: PF00155 Aminotran_1_2; SSF53383 PyrdxlP-dep_Trfase_major
EC number: =2.6.1.9
Molecular weight: Translated: 41438; Mature: 41438
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAKGESMLSRRLEALTPYVPGEQPRDRKYLKLNTNENPWPPSPRIEALLREYDPDQLRL CCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCEEE YPDPWSLSLRQKIARKYSVDVDNIFVGNGSDEILSFVWYAFFDGLYGKLVFPQFTYSFYP ECCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCEECCHHCCEEEE VYCDFYEIPYRRIPLRPDFTLDLEAMIENGGEPSCGMAFPNPNAPTGIALTLKQIEDLLN EEEEHHHCCCEECCCCCCCCEEHHHHHHCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHH RYPTDRVVVIDEAYIDFGGESAVGLIDRYANLLVARTFSKSFSLAGLRLGYALGSPELIR HCCCCEEEEEEEHEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCCHHHHH ALFVTKDSFNSYTVGRLTQTIGEIAIEDEAWFAEKIARIIEARDFFSEELKGQGWQVLPS HHHHCCCCCCCEEHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECC KANFVFVRKPGLTGQTIYETLKERGILVRYFNVEGIRDFVRVTIGKREDMARLLEELKRL CCCEEEEECCCCCHHHHHHHHHHCCEEEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHH F C >Mature Secondary Structure MNAKGESMLSRRLEALTPYVPGEQPRDRKYLKLNTNENPWPPSPRIEALLREYDPDQLRL CCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCEEE YPDPWSLSLRQKIARKYSVDVDNIFVGNGSDEILSFVWYAFFDGLYGKLVFPQFTYSFYP ECCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCEECCHHCCEEEE VYCDFYEIPYRRIPLRPDFTLDLEAMIENGGEPSCGMAFPNPNAPTGIALTLKQIEDLLN EEEEHHHCCCEECCCCCCCCEEHHHHHHCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHH RYPTDRVVVIDEAYIDFGGESAVGLIDRYANLLVARTFSKSFSLAGLRLGYALGSPELIR HCCCCEEEEEEEHEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCCHHHHH ALFVTKDSFNSYTVGRLTQTIGEIAIEDEAWFAEKIARIIEARDFFSEELKGQGWQVLPS HHHHCCCCCCCEEHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECC KANFVFVRKPGLTGQTIYETLKERGILVRYFNVEGIRDFVRVTIGKREDMARLLEELKRL CCCEEEEECCCCCHHHHHHHHHHCCEEEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHH F C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA