Click here to switch to the map view.

The map label for this gene is 85859116

Identifier: 85859116

GI number: 85859116

Start: 1293559

End: 1294830

Strand: Direct

Name: 85859116

Synonym: SYN_01515

Alternate gene names: NA

Gene position: 1293559-1294830 (Clockwise)

Preceding gene: 85859115

Following gene: 85859117

Centisome position: 40.69

GC content: 51.97

Gene sequence:

>1272_bases
ATGAGTACAGATAATTACTATATACGACGAAGACTCCTGAGTTCATTGACCGCGCATCTCGACCAGCCGGAAATAACCGT
TCTTGTCGGGCCACGTCAGTCTGGGAAGACAACCATTCTTAAGAGACTCGAAAGCGAACTTCGCGCTGGGGGCCGAAAAA
CACTCTGGCTCAATCTGGATTTTGAAGACGATTTCCGCCATGTCGCGTCAGAGGGCGCGCTTCTACAGAAGATTCAACTG
GAATTGGGCAGCGGGGGCGGTGTGGTTTTTATCGATGAGATTCAACGTCGGGAAAATGCCGGGTTGTTCCTGAAAGGGCT
CTATGATCAAGGGCTTCCCTGGAAGTTTGTGGTCTCGGGATCGGGGAGCATCGAACTTAAGGAGAAGATCAGCGAATCAC
TGGTCGGCAGGAAACGGCTGTTCGAGCTTTCAACGGTCAGCTTCGGTGAGTTTGCTGATTTCAGAACCGGATATCGTTAC
ACAGACCGCCTCAGAGATTATTTCCGCACGGAGCCGTCAAAAACAGATCAACTTTTCCGGGAATACCTCATGTACGGCGG
CTATCCGCGGGTTGTCCTGGCAGACACCCATCAGGAAAAGATGGCGACAATCAACGAGATTTTCCGCAGTTATCTGGAAA
AGGACATTGTTTACCTGCTGAGGGTGGAAAAGAGCGAAAGCTTCAGCAACCTGGTCCGGGTCCTGGCGACCCAGTCAGGG
AAGATGGTCAGCTACTCTGAGCTTTCCGCAACCCTGGGGCTCTCTCTGGCGACGGTCAAGCTTTACCTTTGGTATCTGGA
AAAAACCTATATTATCGACAAAGTGACTCCCTGGTATACCAATATCAGGAAGGAGATCACCAAAGCGCCGGTCTATTATT
TCCGGGATATCGGCCTGCGGAATTTTGCCGCGGGCAGCTTCGGCGCCCTCTCCGACAGCGAGGCCGGGTTTGCCTTCCAG
AACGTGATCCACGCTATGCTCAAGGAGCGTTTTCCCCTGGCGGATTCGACGATTCATTACTGGCGCACCAAGGACAAGGC
AGAGGTTGACTTTGTCCTCCGAAGCGGAGACACGGTGACGCCGCTTGAAGTCAAATATCGAGACATGAAAAAGCTGGATG
TCCGACGCTCCTTTCTCGGGTTTCTCACGCGATACCATCCGGAGTTCGGCTATATCGTCAACAGGAATTACAGCGACGAA
GCGTTGATCTGTCAAACACGAGTACGGTGCCTGCCCTATTGGGAGTTAATGTTTGAAGAGGCGTTTCCTTAA

Upstream 100 bases:

>100_bases
AAAAAGGGACAGCGTACATTTTTTTAGAAAAAATGGGATGCGTCCCTTTTTTGTTGTTTATTAAAGTTTACTTTTAATAT
TCTCGTGCTAAAATGCATCT

Downstream 100 bases:

>100_bases
CAAACAAAGACAGCTTAAAAAAAGAGACAAAGTATAATTGATTTATCTCTAAAAAAGAGATAATGACAATGCTATGAAAA
ATGTAATTTCACAACTTATC

Product: ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 422

Protein sequence:

>423_residues
MSTDNYYIRRRLLSSLTAHLDQPEITVLVGPRQSGKTTILKRLESELRAGGRKTLWLNLDFEDDFRHVASEGALLQKIQL
ELGSGGGVVFIDEIQRRENAGLFLKGLYDQGLPWKFVVSGSGSIELKEKISESLVGRKRLFELSTVSFGEFADFRTGYRY
TDRLRDYFRTEPSKTDQLFREYLMYGGYPRVVLADTHQEKMATINEIFRSYLEKDIVYLLRVEKSESFSNLVRVLATQSG
KMVSYSELSATLGLSLATVKLYLWYLEKTYIIDKVTPWYTNIRKEITKAPVYYFRDIGLRNFAAGSFGALSDSEAGFAFQ
NVIHAMLKERFPLADSTIHYWRTKDKAEVDFVLRSGDTVTPLEVKYRDMKKLDVRRSFLGFLTRYHPEFGYIVNRNYSDE
ALICQTRVRCLPYWELMFEEAFP

Sequences:

>Translated_423_residues
MSTDNYYIRRRLLSSLTAHLDQPEITVLVGPRQSGKTTILKRLESELRAGGRKTLWLNLDFEDDFRHVASEGALLQKIQL
ELGSGGGVVFIDEIQRRENAGLFLKGLYDQGLPWKFVVSGSGSIELKEKISESLVGRKRLFELSTVSFGEFADFRTGYRY
TDRLRDYFRTEPSKTDQLFREYLMYGGYPRVVLADTHQEKMATINEIFRSYLEKDIVYLLRVEKSESFSNLVRVLATQSG
KMVSYSELSATLGLSLATVKLYLWYLEKTYIIDKVTPWYTNIRKEITKAPVYYFRDIGLRNFAAGSFGALSDSEAGFAFQ
NVIHAMLKERFPLADSTIHYWRTKDKAEVDFVLRSGDTVTPLEVKYRDMKKLDVRRSFLGFLTRYHPEFGYIVNRNYSDE
ALICQTRVRCLPYWELMFEEAFP
>Mature_422_residues
STDNYYIRRRLLSSLTAHLDQPEITVLVGPRQSGKTTILKRLESELRAGGRKTLWLNLDFEDDFRHVASEGALLQKIQLE
LGSGGGVVFIDEIQRRENAGLFLKGLYDQGLPWKFVVSGSGSIELKEKISESLVGRKRLFELSTVSFGEFADFRTGYRYT
DRLRDYFRTEPSKTDQLFREYLMYGGYPRVVLADTHQEKMATINEIFRSYLEKDIVYLLRVEKSESFSNLVRVLATQSGK
MVSYSELSATLGLSLATVKLYLWYLEKTYIIDKVTPWYTNIRKEITKAPVYYFRDIGLRNFAAGSFGALSDSEAGFAFQN
VIHAMLKERFPLADSTIHYWRTKDKAEVDFVLRSGDTVTPLEVKYRDMKKLDVRRSFLGFLTRYHPEFGYIVNRNYSDEA
LICQTRVRCLPYWELMFEEAFP

Specific function: Unknown

COG id: COG1373

COG function: function code R; Predicted ATPase (AAA+ superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 49045; Mature: 48914

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTDNYYIRRRLLSSLTAHLDQPEITVLVGPRQSGKTTILKRLESELRAGGRKTLWLNLD
CCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEC
FEDDFRHVASEGALLQKIQLELGSGGGVVFIDEIQRRENAGLFLKGLYDQGLPWKFVVSG
CHHHHHHHHHCCHHEEHHHHEECCCCCEEEEHHHHCCCCCCEEEEECCCCCCCEEEEEEC
SGSIELKEKISESLVGRKRLFELSTVSFGEFADFRTGYRYTDRLRDYFRTEPSKTDQLFR
CCCEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHCCCCCHHHHHHH
EYLMYGGYPRVVLADTHQEKMATINEIFRSYLEKDIVYLLRVEKSESFSNLVRVLATQSG
HHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHCCCC
KMVSYSELSATLGLSLATVKLYLWYLEKTYIIDKVTPWYTNIRKEITKAPVYYFRDIGLR
CEEEHHHHHHHHCHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHCCHHHHHHCCCC
NFAAGSFGALSDSEAGFAFQNVIHAMLKERFPLADSTIHYWRTKDKAEVDFVLRSGDTVT
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEECCCEEC
PLEVKYRDMKKLDVRRSFLGFLTRYHPEFGYIVNRNYSDEALICQTRVRCLPYWELMFEE
EEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
AFP
CCC
>Mature Secondary Structure 
STDNYYIRRRLLSSLTAHLDQPEITVLVGPRQSGKTTILKRLESELRAGGRKTLWLNLD
CCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEC
FEDDFRHVASEGALLQKIQLELGSGGGVVFIDEIQRRENAGLFLKGLYDQGLPWKFVVSG
CHHHHHHHHHCCHHEEHHHHEECCCCCEEEEHHHHCCCCCCEEEEECCCCCCCEEEEEEC
SGSIELKEKISESLVGRKRLFELSTVSFGEFADFRTGYRYTDRLRDYFRTEPSKTDQLFR
CCCEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHCCCCCHHHHHHH
EYLMYGGYPRVVLADTHQEKMATINEIFRSYLEKDIVYLLRVEKSESFSNLVRVLATQSG
HHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHCCCC
KMVSYSELSATLGLSLATVKLYLWYLEKTYIIDKVTPWYTNIRKEITKAPVYYFRDIGLR
CEEEHHHHHHHHCHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHCCHHHHHHCCCC
NFAAGSFGALSDSEAGFAFQNVIHAMLKERFPLADSTIHYWRTKDKAEVDFVLRSGDTVT
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEECCCEEC
PLEVKYRDMKKLDVRRSFLGFLTRYHPEFGYIVNRNYSDEALICQTRVRCLPYWELMFEE
EEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
AFP
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]