Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85859078

Identifier: 85859078

GI number: 85859078

Start: 1254031

End: 1254504

Strand: Direct

Name: 85859078

Synonym: SYN_00422

Alternate gene names: NA

Gene position: 1254031-1254504 (Clockwise)

Preceding gene: 85859077

Following gene: 85859079

Centisome position: 39.44

GC content: 45.57

Gene sequence:

>474_bases
ATGATTTTTGAAAACCGGATCAAAAAATTCTATCAGCAGTTCATCAGTCTCAAGGGTGACCCGGAATCGCTGGCGTGGGG
CATGGCGATGGGGGTCTTCATCGGAGTCACGCCGACAATTCCTTTTCACACTGTCCTGATTGTTTTTTTTGGCTTTCTAC
TCAAAAAGAACATGACTTCAGCGTTTCTCGGATCATCGCTGATTTCCAACCCGGTGACCATTCCCCTTCTTTATCTAAGT
GAATATCAGATCGGCAGATTGATCCTGGGGCCAAGCGGAGCTGAAATCAGGATTAAGGAATATACCGTTGCATCCATCCT
CCAACTCGGATGGGAGGTTGCCGTGCCTCTTCTTCTCGGAGGGTTTCTCCTGGGCCTTGTTTTTACATATCCCGCTTACT
TCCTTTCTTATCGACTTTTATCTTTTATGAGAAAAAAAGAAGCCTATGACATTCGTTCGACAGATTCTCCGTAA

Upstream 100 bases:

>100_bases
GGTGGGCGAAAACCTTCTGAACAAAGGGAAAAGCGAAGAACTCAGTATAAATGCCGTATCGCGATGGCCTCTCGATGTGG
CGGGATCGTTCCGGTAGAAA

Downstream 100 bases:

>100_bases
TCATGATATCAAGCCGGTAAAGAGACTCGGCCAATGTTTTCTTGCAGATTTCTCCGTCATGAAGAAGATTGTGGAGCTTG
CGGAAATCAAGGAGGATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MIFENRIKKFYQQFISLKGDPESLAWGMAMGVFIGVTPTIPFHTVLIVFFGFLLKKNMTSAFLGSSLISNPVTIPLLYLS
EYQIGRLILGPSGAEIRIKEYTVASILQLGWEVAVPLLLGGFLLGLVFTYPAYFLSYRLLSFMRKKEAYDIRSTDSP

Sequences:

>Translated_157_residues
MIFENRIKKFYQQFISLKGDPESLAWGMAMGVFIGVTPTIPFHTVLIVFFGFLLKKNMTSAFLGSSLISNPVTIPLLYLS
EYQIGRLILGPSGAEIRIKEYTVASILQLGWEVAVPLLLGGFLLGLVFTYPAYFLSYRLLSFMRKKEAYDIRSTDSP
>Mature_157_residues
MIFENRIKKFYQQFISLKGDPESLAWGMAMGVFIGVTPTIPFHTVLIVFFGFLLKKNMTSAFLGSSLISNPVTIPLLYLS
EYQIGRLILGPSGAEIRIKEYTVASILQLGWEVAVPLLLGGFLLGLVFTYPAYFLSYRLLSFMRKKEAYDIRSTDSP

Specific function: Unknown

COG id: COG3216

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17673; Mature: 17673

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFENRIKKFYQQFISLKGDPESLAWGMAMGVFIGVTPTIPFHTVLIVFFGFLLKKNMTS
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHH
AFLGSSLISNPVTIPLLYLSEYQIGRLILGPSGAEIRIKEYTVASILQLGWEVAVPLLLG
HHHHHHHHCCCCEEEEHEECCCCCCEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
GFLLGLVFTYPAYFLSYRLLSFMRKKEAYDIRSTDSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MIFENRIKKFYQQFISLKGDPESLAWGMAMGVFIGVTPTIPFHTVLIVFFGFLLKKNMTS
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHH
AFLGSSLISNPVTIPLLYLSEYQIGRLILGPSGAEIRIKEYTVASILQLGWEVAVPLLLG
HHHHHHHHCCCCEEEEHEECCCCCCEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
GFLLGLVFTYPAYFLSYRLLSFMRKKEAYDIRSTDSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA