Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85858916

Identifier: 85858916

GI number: 85858916

Start: 1095927

End: 1096730

Strand: Direct

Name: 85858916

Synonym: SYN_02129

Alternate gene names: NA

Gene position: 1095927-1096730 (Clockwise)

Preceding gene: 85858915

Following gene: 85858917

Centisome position: 34.47

GC content: 51.87

Gene sequence:

>804_bases
ATGAAAGAGGTTGACTGGTTGGAATTATGGCGTGAGCTGGTGACAAGAAACAAACGGCCCAAAACGGACAAAAGACTGGT
CGAGCGATATAGGGCGCATTCACGAAAGCGGACAGAAAGACCAGACCCTCTTCTGGAAGTCGTCCTTAAAGAGATGGATG
AGCTGGATGCCGTGATTGAGATCGGCCCCGGCACAGGACGTTGGACGATTCCGGTGGCGAAAAGGGTCAGGAGTGTGACG
GCGATTGAACCTTCTGCCGGCATGGTCGATATTCTGAGAGAAAATCTTAATCATGCCGGTTTTCATAACGTCGAAATTCT
TTCGCAAACCTGGGAAGATGCTTCTCCTTCAATTCACGACGCCGTTATGTGTTCCCACGGCATGTATGGCAGTCCGGATC
TGGCGGCCTTTGTGCGTAAAATGGAACGCTTTGCACGCAAAAGCTGCTGGCTGGCTCTGAGGCTGCCGCCGGGAAACGGC
ATCATGGCGGAACTGTCCTTGAAGATTCATGGTTGTCGTCATGACAGCCCCGACGCGGTGATTGCGTGGAACGCCCTCTA
TGCGCTGGGCATTCATGCGAATGTACTGGTTGAAGAAGGCATGGAAAACTGGGTCAATGATACTTTGGATGACGCCTTCA
GCAGGGCGAAGAGACATTTACGTCTTGAAACAGACGAGACGAAATATGATGATCTGATCTATTCCACATTGAGACGCCGG
CTGAGCTTCAGCAATGGTGTTTATATCTGGCCGGACGGTATGCGCTCGGCACTTCTCCGGTGGAGTTCCCATCGCAAAGA
CTGA

Upstream 100 bases:

>100_bases
GCAACTTGACATGTCAATTTTTTGTGACATCAGTGACTCCGGTGTTGTTGAGCGTATATTGCGCGCATGGGTCACTTTGT
ATTAATGAAGAGGATCGGAA

Downstream 100 bases:

>100_bases
AGCAGATTATCCTGTCTGTCCCGTGCATGTCGCCGCTTGTTTCAACCATTAATCCACATGGAGATGCCGTATGCAGGAAG
TATGGATCGCCTTTGGACTG

Product: SAM-dependent methyltransferase

Products: NA

Alternate protein names: Ribosomal RNA Adenine Dimethylase; Methyltransferase; SAM-Dependent Methyltransferase

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MKEVDWLELWRELVTRNKRPKTDKRLVERYRAHSRKRTERPDPLLEVVLKEMDELDAVIEIGPGTGRWTIPVAKRVRSVT
AIEPSAGMVDILRENLNHAGFHNVEILSQTWEDASPSIHDAVMCSHGMYGSPDLAAFVRKMERFARKSCWLALRLPPGNG
IMAELSLKIHGCRHDSPDAVIAWNALYALGIHANVLVEEGMENWVNDTLDDAFSRAKRHLRLETDETKYDDLIYSTLRRR
LSFSNGVYIWPDGMRSALLRWSSHRKD

Sequences:

>Translated_267_residues
MKEVDWLELWRELVTRNKRPKTDKRLVERYRAHSRKRTERPDPLLEVVLKEMDELDAVIEIGPGTGRWTIPVAKRVRSVT
AIEPSAGMVDILRENLNHAGFHNVEILSQTWEDASPSIHDAVMCSHGMYGSPDLAAFVRKMERFARKSCWLALRLPPGNG
IMAELSLKIHGCRHDSPDAVIAWNALYALGIHANVLVEEGMENWVNDTLDDAFSRAKRHLRLETDETKYDDLIYSTLRRR
LSFSNGVYIWPDGMRSALLRWSSHRKD
>Mature_267_residues
MKEVDWLELWRELVTRNKRPKTDKRLVERYRAHSRKRTERPDPLLEVVLKEMDELDAVIEIGPGTGRWTIPVAKRVRSVT
AIEPSAGMVDILRENLNHAGFHNVEILSQTWEDASPSIHDAVMCSHGMYGSPDLAAFVRKMERFARKSCWLALRLPPGNG
IMAELSLKIHGCRHDSPDAVIAWNALYALGIHANVLVEEGMENWVNDTLDDAFSRAKRHLRLETDETKYDDLIYSTLRRR
LSFSNGVYIWPDGMRSALLRWSSHRKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30753; Mature: 30753

Theoretical pI: Translated: 8.13; Mature: 8.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEVDWLELWRELVTRNKRPKTDKRLVERYRAHSRKRTERPDPLLEVVLKEMDELDAVIE
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEE
IGPGTGRWTIPVAKRVRSVTAIEPSAGMVDILRENLNHAGFHNVEILSQTWEDASPSIHD
ECCCCCCEEEHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHH
AVMCSHGMYGSPDLAAFVRKMERFARKSCWLALRLPPGNGIMAELSLKIHGCRHDSPDAV
HHHHCCCCCCCHHHHHHHHHHHHHHHHHCEEEEEECCCCCEEEEEEEEEECCCCCCCCEE
IAWNALYALGIHANVLVEEGMENWVNDTLDDAFSRAKRHLRLETDETKYDDLIYSTLRRR
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHH
LSFSNGVYIWPDGMRSALLRWSSHRKD
HCCCCCEEECCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKEVDWLELWRELVTRNKRPKTDKRLVERYRAHSRKRTERPDPLLEVVLKEMDELDAVIE
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEE
IGPGTGRWTIPVAKRVRSVTAIEPSAGMVDILRENLNHAGFHNVEILSQTWEDASPSIHD
ECCCCCCEEEHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHH
AVMCSHGMYGSPDLAAFVRKMERFARKSCWLALRLPPGNGIMAELSLKIHGCRHDSPDAV
HHHHCCCCCCCHHHHHHHHHHHHHHHHHCEEEEEECCCCCEEEEEEEEEECCCCCCCCEE
IAWNALYALGIHANVLVEEGMENWVNDTLDDAFSRAKRHLRLETDETKYDDLIYSTLRRR
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHH
LSFSNGVYIWPDGMRSALLRWSSHRKD
HCCCCCEEECCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA