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The map label for this gene is mmgC [H]

Identifier: 85858915

GI number: 85858915

Start: 1094558

End: 1095727

Strand: Direct

Name: mmgC [H]

Synonym: SYN_02128

Alternate gene names: 85858915

Gene position: 1094558-1095727 (Clockwise)

Preceding gene: 85858914

Following gene: 85858916

Centisome position: 34.43

GC content: 57.26

Gene sequence:

>1170_bases
ATGGAATTCTTCTTCAGGAGTGTGCTTATGGAAATTCTCCAGTATATGCAGGAACATCGTATCTTCCGGGAAACATTCAA
GAAGTTTTTAGCCAAAGAGATCGTTCCCCACATCGAGGAGTGGGAAGAGGCAGGAATTGTCCCAAGGTGGGCCTGGAAAA
AGATGGGGGAGCAGGGCTTCCTCGGAATGAGCGTCCCGGAAGCCTATGGAGGACCCGCCGTCGATTTTCTCTATGAGGTG
GTCGTCATCGAGGAACTGGCCAGGACCAATTTTACGGGGCTCGCGGCCCGCCTGCACAATACCGTCGTGCTGCCCTATCT
GATCGAGTACGGTTCGGAAGAGCAGAAAAAACGTTATCTCCCTGGCTGTGTCTCCGGGGATATCATCACGGCCATCGGCA
TGACGGAGCCCAATACCGGCAGTGACCTGGCGGCGATCCGCACCACCGCCGTAGCAGACAGGGACGAAATCGTCCTCAAC
GGCCAGAAGACCTTCATCAGCAACGGAATCAACTGCGACCTCATCGTCCTGGTGGCGAGAGATCCGGCGGTGGAGGACCC
GCACAAGGCGATCGATCTCTACCTTGTGGAGGCGGGAACGCCGGGCTTCGAAAAAGGCCGCAATCTTAAGAAAATCGGCT
GGCACAGCCAGGACACGGCGGAACTTTTCTTCGCGGAATGCCGGATTCCCGTGACGAACCGTCTGGGCGGTAAAGGGACG
GGATTCCGGAAAATGATGGAAATGCTTCAGCAGGAGCGGCTGGTGGTGGCCATCGGGGCGCAGGTGATGGCGGAGTTCAT
GCTGGAGAACACCATCGCCTACTGCCGGGAACGGAAGGTCTTCGGACGGCCCATTTCCCGTTTTCAGAATTCCCAGTTCG
AGTTCGCGGAAATGGCTACAGAGATCGAGATCGGGCGGACCTTTTTAGATAAGATGATTGTCGAGCATATGGAAGGCCGG
GATCTCACCCGGGAGATGTCCATGGCGAAATACTGGATCACCGACATGGCGGGGCGGGTTGCGGATCGCTGCCTGCAGCT
TCACGGCGGGTACGGGTACTGTGAGGAATACCCCATCGCCCGGGCCTGGCGGGACATCCGGATCATGCGGATCTACGCCG
GGTCGAACGAAATCATGAAGGTCATCATCGCCCGGACGCTGGGGTTGTAA

Upstream 100 bases:

>100_bases
GCAACCATCCTGCCTGGGAACGTGAAAGGGGTGCAAGGCACAGGAAACATGACTTAAATTCTACACTTGAACTGATTCCC
CCGGTCTGCGGGGTTATTTC

Downstream 100 bases:

>100_bases
CTGAGATCGTACCTATTGCGGCAATCGGTCGGAGAAATGTGGATTCGCTCACAGTCTTGATTGAAAATATGGAAGTAGGC
ATGAACATAATTCAAAACCG

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MEFFFRSVLMEILQYMQEHRIFRETFKKFLAKEIVPHIEEWEEAGIVPRWAWKKMGEQGFLGMSVPEAYGGPAVDFLYEV
VVIEELARTNFTGLAARLHNTVVLPYLIEYGSEEQKKRYLPGCVSGDIITAIGMTEPNTGSDLAAIRTTAVADRDEIVLN
GQKTFISNGINCDLIVLVARDPAVEDPHKAIDLYLVEAGTPGFEKGRNLKKIGWHSQDTAELFFAECRIPVTNRLGGKGT
GFRKMMEMLQQERLVVAIGAQVMAEFMLENTIAYCRERKVFGRPISRFQNSQFEFAEMATEIEIGRTFLDKMIVEHMEGR
DLTREMSMAKYWITDMAGRVADRCLQLHGGYGYCEEYPIARAWRDIRIMRIYAGSNEIMKVIIARTLGL

Sequences:

>Translated_389_residues
MEFFFRSVLMEILQYMQEHRIFRETFKKFLAKEIVPHIEEWEEAGIVPRWAWKKMGEQGFLGMSVPEAYGGPAVDFLYEV
VVIEELARTNFTGLAARLHNTVVLPYLIEYGSEEQKKRYLPGCVSGDIITAIGMTEPNTGSDLAAIRTTAVADRDEIVLN
GQKTFISNGINCDLIVLVARDPAVEDPHKAIDLYLVEAGTPGFEKGRNLKKIGWHSQDTAELFFAECRIPVTNRLGGKGT
GFRKMMEMLQQERLVVAIGAQVMAEFMLENTIAYCRERKVFGRPISRFQNSQFEFAEMATEIEIGRTFLDKMIVEHMEGR
DLTREMSMAKYWITDMAGRVADRCLQLHGGYGYCEEYPIARAWRDIRIMRIYAGSNEIMKVIIARTLGL
>Mature_389_residues
MEFFFRSVLMEILQYMQEHRIFRETFKKFLAKEIVPHIEEWEEAGIVPRWAWKKMGEQGFLGMSVPEAYGGPAVDFLYEV
VVIEELARTNFTGLAARLHNTVVLPYLIEYGSEEQKKRYLPGCVSGDIITAIGMTEPNTGSDLAAIRTTAVADRDEIVLN
GQKTFISNGINCDLIVLVARDPAVEDPHKAIDLYLVEAGTPGFEKGRNLKKIGWHSQDTAELFFAECRIPVTNRLGGKGT
GFRKMMEMLQQERLVVAIGAQVMAEFMLENTIAYCRERKVFGRPISRFQNSQFEFAEMATEIEIGRTFLDKMIVEHMEGR
DLTREMSMAKYWITDMAGRVADRCLQLHGGYGYCEEYPIARAWRDIRIMRIYAGSNEIMKVIIARTLGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501857, Length=374, Percent_Identity=43.8502673796791, Blast_Score=327, Evalue=1e-89,
Organism=Homo sapiens, GI226958412, Length=375, Percent_Identity=33.0666666666667, Blast_Score=231, Evalue=1e-60,
Organism=Homo sapiens, GI4557233, Length=373, Percent_Identity=33.7801608579088, Blast_Score=223, Evalue=2e-58,
Organism=Homo sapiens, GI226958414, Length=338, Percent_Identity=33.7278106508876, Blast_Score=218, Evalue=9e-57,
Organism=Homo sapiens, GI7656849, Length=373, Percent_Identity=33.5120643431635, Blast_Score=213, Evalue=2e-55,
Organism=Homo sapiens, GI4557231, Length=377, Percent_Identity=33.6870026525199, Blast_Score=209, Evalue=5e-54,
Organism=Homo sapiens, GI187960098, Length=377, Percent_Identity=33.6870026525199, Blast_Score=209, Evalue=5e-54,
Organism=Homo sapiens, GI4501859, Length=375, Percent_Identity=31.2, Blast_Score=201, Evalue=1e-51,
Organism=Homo sapiens, GI21361497, Length=378, Percent_Identity=30.4232804232804, Blast_Score=172, Evalue=4e-43,
Organism=Homo sapiens, GI76496475, Length=396, Percent_Identity=30.050505050505, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI4557235, Length=396, Percent_Identity=30.050505050505, Blast_Score=171, Evalue=2e-42,
Organism=Homo sapiens, GI4503943, Length=389, Percent_Identity=27.2493573264781, Blast_Score=133, Evalue=3e-31,
Organism=Homo sapiens, GI7669494, Length=374, Percent_Identity=27.2727272727273, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI38505218, Length=391, Percent_Identity=24.5524296675192, Blast_Score=105, Evalue=8e-23,
Organism=Homo sapiens, GI211971008, Length=286, Percent_Identity=26.2237762237762, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI48976061, Length=286, Percent_Identity=26.2237762237762, Blast_Score=96, Evalue=5e-20,
Organism=Escherichia coli, GI87081958, Length=347, Percent_Identity=30.5475504322767, Blast_Score=181, Evalue=7e-47,
Organism=Escherichia coli, GI1786223, Length=376, Percent_Identity=27.3936170212766, Blast_Score=144, Evalue=7e-36,
Organism=Escherichia coli, GI87082384, Length=289, Percent_Identity=24.9134948096886, Blast_Score=69, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17538396, Length=377, Percent_Identity=31.8302387267904, Blast_Score=220, Evalue=8e-58,
Organism=Caenorhabditis elegans, GI17551932, Length=376, Percent_Identity=32.1808510638298, Blast_Score=216, Evalue=1e-56,
Organism=Caenorhabditis elegans, GI17505929, Length=384, Percent_Identity=30.9895833333333, Blast_Score=211, Evalue=4e-55,
Organism=Caenorhabditis elegans, GI17570075, Length=381, Percent_Identity=33.8582677165354, Blast_Score=211, Evalue=4e-55,
Organism=Caenorhabditis elegans, GI17533517, Length=368, Percent_Identity=33.695652173913, Blast_Score=208, Evalue=3e-54,
Organism=Caenorhabditis elegans, GI17569725, Length=364, Percent_Identity=32.1428571428571, Blast_Score=196, Evalue=1e-50,
Organism=Caenorhabditis elegans, GI17534899, Length=382, Percent_Identity=31.9371727748691, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI17508101, Length=375, Percent_Identity=30.1333333333333, Blast_Score=193, Evalue=1e-49,
Organism=Caenorhabditis elegans, GI17506239, Length=370, Percent_Identity=31.3513513513514, Blast_Score=186, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI71990804, Length=282, Percent_Identity=35.4609929078014, Blast_Score=171, Evalue=4e-43,
Organism=Caenorhabditis elegans, GI71985184, Length=360, Percent_Identity=28.6111111111111, Blast_Score=158, Evalue=4e-39,
Organism=Caenorhabditis elegans, GI32563615, Length=233, Percent_Identity=33.9055793991416, Blast_Score=127, Evalue=7e-30,
Organism=Caenorhabditis elegans, GI17534353, Length=388, Percent_Identity=25.5154639175258, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI71982178, Length=281, Percent_Identity=30.2491103202847, Blast_Score=125, Evalue=5e-29,
Organism=Caenorhabditis elegans, GI71985192, Length=314, Percent_Identity=27.0700636942675, Blast_Score=118, Evalue=4e-27,
Organism=Caenorhabditis elegans, GI17562446, Length=289, Percent_Identity=29.0657439446367, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17531909, Length=241, Percent_Identity=26.1410788381743, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI21356377, Length=372, Percent_Identity=28.7634408602151, Blast_Score=202, Evalue=3e-52,
Organism=Drosophila melanogaster, GI24660351, Length=371, Percent_Identity=34.2318059299191, Blast_Score=201, Evalue=5e-52,
Organism=Drosophila melanogaster, GI24666513, Length=372, Percent_Identity=30.1075268817204, Blast_Score=190, Evalue=1e-48,
Organism=Drosophila melanogaster, GI24646207, Length=372, Percent_Identity=29.5698924731183, Blast_Score=188, Evalue=5e-48,
Organism=Drosophila melanogaster, GI21355753, Length=375, Percent_Identity=30.1333333333333, Blast_Score=185, Evalue=6e-47,
Organism=Drosophila melanogaster, GI281363737, Length=343, Percent_Identity=29.1545189504373, Blast_Score=159, Evalue=4e-39,
Organism=Drosophila melanogaster, GI19920834, Length=380, Percent_Identity=26.5789473684211, Blast_Score=122, Evalue=5e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 44387; Mature: 44387

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFFFRSVLMEILQYMQEHRIFRETFKKFLAKEIVPHIEEWEEAGIVPRWAWKKMGEQGF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCC
LGMSVPEAYGGPAVDFLYEVVVIEELARTNFTGLAARLHNTVVLPYLIEYGSEEQKKRYL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCC
PGCVSGDIITAIGMTEPNTGSDLAAIRTTAVADRDEIVLNGQKTFISNGINCDLIVLVAR
CCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEECCCHHHHCCCCCCEEEEEEEC
DPAVEDPHKAIDLYLVEAGTPGFEKGRNLKKIGWHSQDTAELFFAECRIPVTNRLGGKGT
CCCCCCCCCEEEEEEEECCCCCHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHCCCCCCCC
GFRKMMEMLQQERLVVAIGAQVMAEFMLENTIAYCRERKVFGRPISRFQNSQFEFAEMAT
CHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHH
EIEIGRTFLDKMIVEHMEGRDLTREMSMAKYWITDMAGRVADRCLQLHGGYGYCEEYPIA
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
RAWRDIRIMRIYAGSNEIMKVIIARTLGL
HHHHCEEEEEEEECCHHHHHHHHHHHHCC
>Mature Secondary Structure
MEFFFRSVLMEILQYMQEHRIFRETFKKFLAKEIVPHIEEWEEAGIVPRWAWKKMGEQGF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCC
LGMSVPEAYGGPAVDFLYEVVVIEELARTNFTGLAARLHNTVVLPYLIEYGSEEQKKRYL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCC
PGCVSGDIITAIGMTEPNTGSDLAAIRTTAVADRDEIVLNGQKTFISNGINCDLIVLVAR
CCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEECCCHHHHCCCCCCEEEEEEEC
DPAVEDPHKAIDLYLVEAGTPGFEKGRNLKKIGWHSQDTAELFFAECRIPVTNRLGGKGT
CCCCCCCCCEEEEEEEECCCCCHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHCCCCCCCC
GFRKMMEMLQQERLVVAIGAQVMAEFMLENTIAYCRERKVFGRPISRFQNSQFEFAEMAT
CHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHH
EIEIGRTFLDKMIVEHMEGRDLTREMSMAKYWITDMAGRVADRCLQLHGGYGYCEEYPIA
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
RAWRDIRIMRIYAGSNEIMKVIIARTLGL
HHHHCEEEEEEEECCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]