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The map label for this gene is omp16 [H]

Identifier: 85858721

GI number: 85858721

Start: 900384

End: 901016

Strand: Direct

Name: omp16 [H]

Synonym: SYN_00189

Alternate gene names: 85858721

Gene position: 900384-901016 (Clockwise)

Preceding gene: 85858720

Following gene: 85858722

Centisome position: 28.32

GC content: 55.13

Gene sequence:

>633_bases
ATGAGGATGAGATTGAGAGAACTGGTGATGTTCGCCTGCGTTCTATGTCTGGCCTTTGTATTTACGACAGGCTGTGCCAA
AAAGCAGGTTCTTCAGGAGGGGGAAGCTGCTGTTGAAAAAGCGGCAGGCGCCGAGGTGAAGCCGGCAACTGAGCCGGGTC
TCACTCCGGAAGAACTGGCGGCCAGGGAGAAGGCTTTAAAAGAGCAGGCCTTGAAAGAACAGCAGGAAAGGGAACGTCTG
GCAGGAGAAAAGGCCGCGGCCGAGAAAGCTGCCGCAGAGGCTGCTGCCAGGGCGGGCGAGGTGCTCGTGGACATCAATTT
CGAATTCGATCAATCCAGCCTGACCCCCGAGTCCAGAGAAATTCTGCAGAAACACGCGGCCTGGCTTGCCGCACATTCCG
GTTATTCCCTGGTGATTGAAGGTCACTGTGATGACCTGGGTACGACGGAATACAATCTGGCCCTCGGTGAACGGCGTGCC
GCGGAGGCAATGAGATTCCTTGTTGCATTGGGCATCGACAGATCACGGATTAAAACCATCAGCTACGGGGAGGAAATGCC
TCTCGATCCTGCGGAAACTGAAGAAGCCCGGGCCAAAAACAGAAGGGCTCATTTCGTAGTCACTCCGAAATAA

Upstream 100 bases:

>100_bases
TTAAATTTCCACTGTTGTGTGCATTTCGTCCGGAGTGCGGGAAAGACGCGGTATTTTTAAGGATGGTTGTTGTGAAGCAT
GAAGAAAGGAGAAAAAGAGG

Downstream 100 bases:

>100_bases
TAAGGTGCGGAGGGAGGTCCTTTGAAAAGCTTTGGATTGCTTGCCGTGGCGGTCGGTCTGGTCATTTTTTCAGGCTGCGC
CACCACGAAAGATTTGAACA

Product: peptidoglycan-associated lipopeptide

Products: NA

Alternate protein names: 16.5 kDa minor OMP; 16 kDa OMP; Minor outer membrane protein omp16 [H]

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MRMRLRELVMFACVLCLAFVFTTGCAKKQVLQEGEAAVEKAAGAEVKPATEPGLTPEELAAREKALKEQALKEQQERERL
AGEKAAAEKAAAEAAARAGEVLVDINFEFDQSSLTPESREILQKHAAWLAAHSGYSLVIEGHCDDLGTTEYNLALGERRA
AEAMRFLVALGIDRSRIKTISYGEEMPLDPAETEEARAKNRRAHFVVTPK

Sequences:

>Translated_210_residues
MRMRLRELVMFACVLCLAFVFTTGCAKKQVLQEGEAAVEKAAGAEVKPATEPGLTPEELAAREKALKEQALKEQQERERL
AGEKAAAEKAAAEAAARAGEVLVDINFEFDQSSLTPESREILQKHAAWLAAHSGYSLVIEGHCDDLGTTEYNLALGERRA
AEAMRFLVALGIDRSRIKTISYGEEMPLDPAETEEARAKNRRAHFVVTPK
>Mature_210_residues
MRMRLRELVMFACVLCLAFVFTTGCAKKQVLQEGEAAVEKAAGAEVKPATEPGLTPEELAAREKALKEQALKEQQERERL
AGEKAAAEKAAAEAAARAGEVLVDINFEFDQSSLTPESREILQKHAAWLAAHSGYSLVIEGHCDDLGTTEYNLALGERRA
AEAMRFLVALGIDRSRIKTISYGEEMPLDPAETEEARAKNRRAHFVVTPK

Specific function: Thought To Play A Role In Bacterial Envelope Integrity. Very Strongly Associated With The Peptidoglycan. [C]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1786962, Length=102, Percent_Identity=37.2549019607843, Blast_Score=81, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR014169 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 23041; Mature: 23041

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMRLRELVMFACVLCLAFVFTTGCAKKQVLQEGEAAVEKAAGAEVKPATEPGLTPEELA
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
AREKALKEQALKEQQERERLAGEKAAAEKAAAEAAARAGEVLVDINFEFDQSSLTPESRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHH
ILQKHAAWLAAHSGYSLVIEGHCDDLGTTEYNLALGERRAAEAMRFLVALGIDRSRIKTI
HHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHEC
SYGEEMPLDPAETEEARAKNRRAHFVVTPK
CCCCCCCCCCCCCHHHHHHCCCCCEEEECC
>Mature Secondary Structure
MRMRLRELVMFACVLCLAFVFTTGCAKKQVLQEGEAAVEKAAGAEVKPATEPGLTPEELA
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
AREKALKEQALKEQQERERLAGEKAAAEKAAAEAAARAGEVLVDINFEFDQSSLTPESRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHH
ILQKHAAWLAAHSGYSLVIEGHCDDLGTTEYNLALGERRAAEAMRFLVALGIDRSRIKTI
HHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHEC
SYGEEMPLDPAETEEARAKNRRAHFVVTPK
CCCCCCCCCCCCCHHHHHHCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8063379; 10456959 [H]