| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85858673
Identifier: 85858673
GI number: 85858673
Start: 848047
End: 848412
Strand: Direct
Name: 85858673
Synonym: SYN_02921
Alternate gene names: NA
Gene position: 848047-848412 (Clockwise)
Preceding gene: 85858672
Following gene: 85858679
Centisome position: 26.67
GC content: 50.55
Gene sequence:
>366_bases ATGAAGCAAAGAGGTTTTTTCAACAAGAATCTCAGGAGGATAAAAATGAAAAAGCTGCTGTTATTTGTCACGGCGTGGTC TCTATTCATGCTTTCCGCTTGTGTGATGGTTCCCGCGCATCATGGAGAAGGCGTCGTCATCGCGCCCGCTCTGCCGGCTG TTGTTGAACTTACCGACCCTTATTACTTCTACGGCGATTTTCACTATTACTATCACAGCGACCGCTGGTCTTACTCAAAA TCAAAGAATGGACCGTGGAAAGATCTGCCGAGGGACCGCTATCCCAGAGAAACCCGCTTCAAGGGCGGGGATGGCCGAGA CGGCAGGGATGACAGGAACGACCGGCACGATTACTATCGGCGATAA
Upstream 100 bases:
>100_bases GAGGGAATTTACACGATGAGGCTGCTGGGTGAAAACATGGCGTGGTTGCTGAAAAAACTGAGGACCTGAGGGATTTGAAA ATAGGATCGCATCAGGGAAC
Downstream 100 bases:
>100_bases AAATCATCGTCGCCTGACTGTGTCCAGGGGGAGGGGGACTGACCTGATCAGGAAAAGTTCCTGTCCCTCCTGGTATTCCC ATAGAGCTTTCCCCGGCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MKQRGFFNKNLRRIKMKKLLLFVTAWSLFMLSACVMVPAHHGEGVVIAPALPAVVELTDPYYFYGDFHYYYHSDRWSYSK SKNGPWKDLPRDRYPRETRFKGGDGRDGRDDRNDRHDYYRR
Sequences:
>Translated_121_residues MKQRGFFNKNLRRIKMKKLLLFVTAWSLFMLSACVMVPAHHGEGVVIAPALPAVVELTDPYYFYGDFHYYYHSDRWSYSK SKNGPWKDLPRDRYPRETRFKGGDGRDGRDDRNDRHDYYRR >Mature_121_residues MKQRGFFNKNLRRIKMKKLLLFVTAWSLFMLSACVMVPAHHGEGVVIAPALPAVVELTDPYYFYGDFHYYYHSDRWSYSK SKNGPWKDLPRDRYPRETRFKGGDGRDGRDDRNDRHDYYRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14515; Mature: 14515
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQRGFFNKNLRRIKMKKLLLFVTAWSLFMLSACVMVPAHHGEGVVIAPALPAVVELTDP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEEECCC YYFYGDFHYYYHSDRWSYSKSKNGPWKDLPRDRYPRETRFKGGDGRDGRDDRNDRHDYYR EEEEECEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCC R C >Mature Secondary Structure MKQRGFFNKNLRRIKMKKLLLFVTAWSLFMLSACVMVPAHHGEGVVIAPALPAVVELTDP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEEECCC YYFYGDFHYYYHSDRWSYSKSKNGPWKDLPRDRYPRETRFKGGDGRDGRDDRNDRHDYYR EEEEECEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA