| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85858672
Identifier: 85858672
GI number: 85858672
Start: 847365
End: 848015
Strand: Direct
Name: 85858672
Synonym: SYN_02920
Alternate gene names: NA
Gene position: 847365-848015 (Clockwise)
Preceding gene: 85858671
Following gene: 85858673
Centisome position: 26.65
GC content: 52.38
Gene sequence:
>651_bases GTGCAGCCCCTTCTTTCTTTATCTATGTTCCGGAATTTGATACAAAGAGAAAAAACGCTCACGGAGGAAAAGGAGATGAA GGTTATTGCATTCAACGGCAGTGCTCGCAAAGATGGAAATACCGCCATTCTCATCAATTATGCGTTGAGCGGATTAAAGA AGGAAGGCATTGAAACGGAAACATTCAACTTGAGCGGCAGGACTCTCCGGGGTTGCACCGCCTGCGGAAAATGCTTCGAA ACCCGGGATAAACGGTGTGCGGTCAAAGAAGACGTCCTGAACGAGTGCCTCGAGAAGATGGTTGAGGCCGACGGCATTCT GCTGGGATCGCCGACCTATTTCGCCGATGTCAGCGCCGAAATGAAGGCTTTGATCGAGCGAGCCGGTTTTGTCGCCAAGG CAAACGGGGATATGCTCCGGCGCAAGGTGGGCGCCGCGGTCGTTGCTGTCCGTCGGGCGGGCAGCATCCACGCATTCAAT ACGCTCAACAATTTTTTCCTGATCAGCCAGATGATCATCCCGGGTTCCAACTACTGGAACATGGGAATCGGTCTGGACAA GGGCGATGTGGAATCGGATCAGGAGGGAATTTACACGATGAGGCTGCTGGGTGAAAACATGGCGTGGTTGCTGAAAAAAC TGAGGACCTGA
Upstream 100 bases:
>100_bases TGCGCGCCTGCGTCGACTTCGTCCTGCCGACTTTATATTATCTCGACCAGCGTGTCGACGTTGATTCAAAGACAGGAAGG GTTGCAGAGCGCAAACGACT
Downstream 100 bases:
>100_bases GGGATTTGAAAATAGGATCGCATCAGGGAACATGAAGCAAAGAGGTTTTTTCAACAAGAATCTCAGGAGGATAAAAATGA AAAAGCTGCTGTTATTTGTC
Product: NADPH-dependent FMN reductase
Products: NA
Alternate protein names: Isf-2; MCJ-2; Mj2 [H]
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MQPLLSLSMFRNLIQREKTLTEEKEMKVIAFNGSARKDGNTAILINYALSGLKKEGIETETFNLSGRTLRGCTACGKCFE TRDKRCAVKEDVLNECLEKMVEADGILLGSPTYFADVSAEMKALIERAGFVAKANGDMLRRKVGAAVVAVRRAGSIHAFN TLNNFFLISQMIIPGSNYWNMGIGLDKGDVESDQEGIYTMRLLGENMAWLLKKLRT
Sequences:
>Translated_216_residues MQPLLSLSMFRNLIQREKTLTEEKEMKVIAFNGSARKDGNTAILINYALSGLKKEGIETETFNLSGRTLRGCTACGKCFE TRDKRCAVKEDVLNECLEKMVEADGILLGSPTYFADVSAEMKALIERAGFVAKANGDMLRRKVGAAVVAVRRAGSIHAFN TLNNFFLISQMIIPGSNYWNMGIGLDKGDVESDQEGIYTMRLLGENMAWLLKKLRT >Mature_216_residues MQPLLSLSMFRNLIQREKTLTEEKEMKVIAFNGSARKDGNTAILINYALSGLKKEGIETETFNLSGRTLRGCTACGKCFE TRDKRCAVKEDVLNECLEKMVEADGILLGSPTYFADVSAEMKALIERAGFVAKANGDMLRRKVGAAVVAVRRAGSIHAFN TLNNFFLISQMIIPGSNYWNMGIGLDKGDVESDQEGIYTMRLLGENMAWLLKKLRT
Specific function: Redox-active protein probably involved in electron transport [H]
COG id: COG0655
COG function: function code R; Multimeric flavodoxin WrbA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family. Isf subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 23971; Mature: 23971
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPLLSLSMFRNLIQREKTLTEEKEMKVIAFNGSARKDGNTAILINYALSGLKKEGIETE CCCHHHHHHHHHHHHHHHHCCHHHCEEEEEECCCCCCCCCEEEEEHHHHHHHHHCCCCCE TFNLSGRTLRGCTACGKCFETRDKRCAVKEDVLNECLEKMVEADGILLGSPTYFADVSAE EEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCHHHHCCHH MKALIERAGFVAKANGDMLRRKVGAAVVAVRRAGSIHAFNTLNNFFLISQMIIPGSNYWN HHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCCCCEE MGIGLDKGDVESDQEGIYTMRLLGENMAWLLKKLRT CCCCCCCCCCCCCCCCCEEEEHHHCCHHHHHHHHCC >Mature Secondary Structure MQPLLSLSMFRNLIQREKTLTEEKEMKVIAFNGSARKDGNTAILINYALSGLKKEGIETE CCCHHHHHHHHHHHHHHHHCCHHHCEEEEEECCCCCCCCCEEEEEHHHHHHHHHCCCCCE TFNLSGRTLRGCTACGKCFETRDKRCAVKEDVLNECLEKMVEADGILLGSPTYFADVSAE EEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCHHHHCCHH MKALIERAGFVAKANGDMLRRKVGAAVVAVRRAGSIHAFNTLNNFFLISQMIIPGSNYWN HHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCCCCEE MGIGLDKGDVESDQEGIYTMRLLGENMAWLLKKLRT CCCCCCCCCCCCCCCCCEEEEHHHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]