| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
Click here to switch to the map view.
The map label for this gene is 85858543
Identifier: 85858543
GI number: 85858543
Start: 704472
End: 705128
Strand: Direct
Name: 85858543
Synonym: SYN_03130
Alternate gene names: NA
Gene position: 704472-705128 (Clockwise)
Preceding gene: 85858542
Following gene: 85858545
Centisome position: 22.16
GC content: 52.51
Gene sequence:
>657_bases ATGTCGCAGGAACATACTTTTGCTTCTCCCGGACCTGCCGGGTTGGCTGCATTAGCTGTCGCGTGCTTTGGTTTTGGTGC CGTTTTCTTAGGACTGGTAAAGCCGGGCGGGTATCCGATCCTTGCTGCCTGGCTTGTCGGTGGCGGTATTGTGCAGATTG TAGTTGCCATCATGGAATTGAAAGATAAAAATTTGACCGGCGGCAACGTCTTTTTGTTTTTTTGTGCCTTCTTCATGTTC GCTGCAGCATTAAGTTTGATGTCCAAGTTCCTTTTGCTGGTCGGAGCGGGTGCTTTTATTCCGAAAGAGGCAGCAGCGGC TTCGGCAGCAGCGGCGATCACCTGGTTCCCGAAACCCGATCCCTATGTGGAGGGATGGTGCTGGATGGCAGGCGCCGCGT TCCTGACAGCGGTAACCCCGGCCTATGCCAAATCAACTTCCCTGCTTTTTTTGCTGGTTATCCTGGTTGACATCTGCCTC TGGCTTATTGTCGGCATGGACACGGGATGGTATGCCGATCCGGCAACCTGGAAGCCGATGGTCGGGTATATGCTGATTTT CTGCGGATGGATCGGAATTTACCTGGCGGGGGCAACGGTTTGCAATACCGCATACGGCAAGTCGATTTATTATGTACCCA AACCCTTGGTGAAGTAA
Upstream 100 bases:
>100_bases AGAGAAAACCGGGAAACTCTATGATGAATGGCCGATTATGGGGATCTTTACTGAAGTCTTTGATAAGCTTTGAAAGGAAC AAAAAAAGGAGGAATACTTT
Downstream 100 bases:
>100_bases TTATTCGCAAGCAAGATAGATAAGGCAACATGCAGGGGCAGGTTATCATACAATATGACCTGCCCCTTCTTTATTGTTGT TTCCTCGGTCAGACCGGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MSQEHTFASPGPAGLAALAVACFGFGAVFLGLVKPGGYPILAAWLVGGGIVQIVVAIMELKDKNLTGGNVFLFFCAFFMF AAALSLMSKFLLLVGAGAFIPKEAAAASAAAAITWFPKPDPYVEGWCWMAGAAFLTAVTPAYAKSTSLLFLLVILVDICL WLIVGMDTGWYADPATWKPMVGYMLIFCGWIGIYLAGATVCNTAYGKSIYYVPKPLVK
Sequences:
>Translated_218_residues MSQEHTFASPGPAGLAALAVACFGFGAVFLGLVKPGGYPILAAWLVGGGIVQIVVAIMELKDKNLTGGNVFLFFCAFFMF AAALSLMSKFLLLVGAGAFIPKEAAAASAAAAITWFPKPDPYVEGWCWMAGAAFLTAVTPAYAKSTSLLFLLVILVDICL WLIVGMDTGWYADPATWKPMVGYMLIFCGWIGIYLAGATVCNTAYGKSIYYVPKPLVK >Mature_217_residues SQEHTFASPGPAGLAALAVACFGFGAVFLGLVKPGGYPILAAWLVGGGIVQIVVAIMELKDKNLTGGNVFLFFCAFFMFA AALSLMSKFLLLVGAGAFIPKEAAAASAAAAITWFPKPDPYVEGWCWMAGAAFLTAVTPAYAKSTSLLFLLVILVDICLW LIVGMDTGWYADPATWKPMVGYMLIFCGWIGIYLAGATVCNTAYGKSIYYVPKPLVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23092; Mature: 22961
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQEHTFASPGPAGLAALAVACFGFGAVFLGLVKPGGYPILAAWLVGGGIVQIVVAIMEL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHH KDKNLTGGNVFLFFCAFFMFAAALSLMSKFLLLVGAGAFIPKEAAAASAAAAITWFPKPD HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEEECCCCC PYVEGWCWMAGAAFLTAVTPAYAKSTSLLFLLVILVDICLWLIVGMDTGWYADPATWKPM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH VGYMLIFCGWIGIYLAGATVCNTAYGKSIYYVPKPLVK HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCC >Mature Secondary Structure SQEHTFASPGPAGLAALAVACFGFGAVFLGLVKPGGYPILAAWLVGGGIVQIVVAIMEL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHH KDKNLTGGNVFLFFCAFFMFAAALSLMSKFLLLVGAGAFIPKEAAAASAAAAITWFPKPD HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEEECCCCC PYVEGWCWMAGAAFLTAVTPAYAKSTSLLFLLVILVDICLWLIVGMDTGWYADPATWKPM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH VGYMLIFCGWIGIYLAGATVCNTAYGKSIYYVPKPLVK HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA