| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is yceG [H]
Identifier: 85858515
GI number: 85858515
Start: 667633
End: 668709
Strand: Direct
Name: yceG [H]
Synonym: SYN_01735
Alternate gene names: 85858515
Gene position: 667633-668709 (Clockwise)
Preceding gene: 85858514
Following gene: 85858516
Centisome position: 21.0
GC content: 49.49
Gene sequence:
>1077_bases ATGCCATATCGCAAGAAAAAATTCCTTCGGATGCCTGCGATGCAAATGAGTCGTGAAATGAGAAAAAAAAGGAAGAAGAA AAAAAAGCTTTTTACGGGTCTTCTGCTGGCACTGCTTTATCTTCTGGCGGCGTGGTTTCTCTTCTATGTCGACCGGCCCG TAAATCCGGATCTTCCCGTGACCGCCGTAAGAATTCTGCCGGGGACCGGATTCTTACAGGTCGTGGATAAACTTCAGCAG GCGGGGCTTGTCCGCAATCCTCCCTTTTTTTACATCCTGATTTTGACAAAGGGCGCCGCAAGAAATTTACGGGCCGGTGA GTATGAATTTTCCGGCAGGATGACCCCCCTGGAGATGGTAAACAGGCTGTCACAGGGAGATATAAAAATACGCCGGATTA CGATCCGGGAAGATCTGAATTTAAAGGAAATAGCAGCCCATCTGGCCGCTCTGCATCTGGTGGATGAAAAAAAATTCCTG GCCCTGACAACGGACCGGACCTTTCTGCGGAGTCTGGGGATTGAAGGGGACACTGCGGAGGGTTACCTTTATCCGGATAC CTATTTCTTTGACTCGGCCATAAGTCCGGGACAGATTATTCGCCGCATGGTGGAACAATTCTGGAAAGTGGTTACCCCGG AGATGAGAGAAAAGGTTCAGCAGATGGGCATGACCATGAACGAGTTTGTTACTCTGGCTTCCCTGATCGGCAAGGAGACA GGCTTCAGTGATGAGAAACCCCTTATCGCAGCGGTTTTTCACAACCGTTTGAAGAAAGGCATGCGCCTTCAAAGTGATCC CACAGCAGTCTACCATATGGCGCCCTTTGACGGAGAGATCAAACGTCGGCATCTGCTGCTGATGACGCCTTACAATACTT ATCATATCGAAGGTTTGCCGCCTGGCCCGATCGCCAATCCAGGTAGAGATTCCCTGCTGGCCGCGGTCACTCCGGCCAAA GTGGATTACCTTTATTTTGTTTCCAATTGCAACGGTTCCCACCAGTTTTCCTCCACATTGAAAGAACACAATCAGGCTGT TGTAAGATATCGACTTGCAAAGGGAAAAGTCGAGTGA
Upstream 100 bases:
>100_bases GAGGCGGAAGAGATCCTGTCCCGCTCCGGGGTTCCCCCAAGAAAAAGAAGGGGAGTCGTTGATCGCCTGGCTGCCAGTCT GATCCTTCAATCCTATCTGG
Downstream 100 bases:
>100_bases TTTTTTCTTGACAAACCGCAAGCCCCTCTTTATATTCATACCCCGGTGGAGTGAAGTGGCGTGATGTGGAGGAATAGGCG GGGATGGGCGGTTTCCGGGG
Product: 4-amino-4-deoxychorismate lyase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MPYRKKKFLRMPAMQMSREMRKKRKKKKKLFTGLLLALLYLLAAWFLFYVDRPVNPDLPVTAVRILPGTGFLQVVDKLQQ AGLVRNPPFFYILILTKGAARNLRAGEYEFSGRMTPLEMVNRLSQGDIKIRRITIREDLNLKEIAAHLAALHLVDEKKFL ALTTDRTFLRSLGIEGDTAEGYLYPDTYFFDSAISPGQIIRRMVEQFWKVVTPEMREKVQQMGMTMNEFVTLASLIGKET GFSDEKPLIAAVFHNRLKKGMRLQSDPTAVYHMAPFDGEIKRRHLLLMTPYNTYHIEGLPPGPIANPGRDSLLAAVTPAK VDYLYFVSNCNGSHQFSSTLKEHNQAVVRYRLAKGKVE
Sequences:
>Translated_358_residues MPYRKKKFLRMPAMQMSREMRKKRKKKKKLFTGLLLALLYLLAAWFLFYVDRPVNPDLPVTAVRILPGTGFLQVVDKLQQ AGLVRNPPFFYILILTKGAARNLRAGEYEFSGRMTPLEMVNRLSQGDIKIRRITIREDLNLKEIAAHLAALHLVDEKKFL ALTTDRTFLRSLGIEGDTAEGYLYPDTYFFDSAISPGQIIRRMVEQFWKVVTPEMREKVQQMGMTMNEFVTLASLIGKET GFSDEKPLIAAVFHNRLKKGMRLQSDPTAVYHMAPFDGEIKRRHLLLMTPYNTYHIEGLPPGPIANPGRDSLLAAVTPAK VDYLYFVSNCNGSHQFSSTLKEHNQAVVRYRLAKGKVE >Mature_357_residues PYRKKKFLRMPAMQMSREMRKKRKKKKKLFTGLLLALLYLLAAWFLFYVDRPVNPDLPVTAVRILPGTGFLQVVDKLQQA GLVRNPPFFYILILTKGAARNLRAGEYEFSGRMTPLEMVNRLSQGDIKIRRITIREDLNLKEIAAHLAALHLVDEKKFLA LTTDRTFLRSLGIEGDTAEGYLYPDTYFFDSAISPGQIIRRMVEQFWKVVTPEMREKVQQMGMTMNEFVTLASLIGKETG FSDEKPLIAAVFHNRLKKGMRLQSDPTAVYHMAPFDGEIKRRHLLLMTPYNTYHIEGLPPGPIANPGRDSLLAAVTPAKV DYLYFVSNCNGSHQFSSTLKEHNQAVVRYRLAKGKVE
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=291, Percent_Identity=34.3642611683849, Blast_Score=166, Evalue=2e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 40943; Mature: 40812
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYRKKKFLRMPAMQMSREMRKKRKKKKKLFTGLLLALLYLLAAWFLFYVDRPVNPDLPV CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE TAVRILPGTGFLQVVDKLQQAGLVRNPPFFYILILTKGAARNLRAGEYEFSGRMTPLEMV EEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCEECCCCCCHHHHH NRLSQGDIKIRRITIREDLNLKEIAAHLAALHLVDEKKFLALTTDRTFLRSLGIEGDTAE HHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCCCCCCC GYLYPDTYFFDSAISPGQIIRRMVEQFWKVVTPEMREKVQQMGMTMNEFVTLASLIGKET CEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCC GFSDEKPLIAAVFHNRLKKGMRLQSDPTAVYHMAPFDGEIKRRHLLLMTPYNTYHIEGLP CCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCEEEECCCC PGPIANPGRDSLLAAVTPAKVDYLYFVSNCNGSHQFSSTLKEHNQAVVRYRLAKGKVE CCCCCCCCCCCEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PYRKKKFLRMPAMQMSREMRKKRKKKKKLFTGLLLALLYLLAAWFLFYVDRPVNPDLPV CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE TAVRILPGTGFLQVVDKLQQAGLVRNPPFFYILILTKGAARNLRAGEYEFSGRMTPLEMV EEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCEECCCCCCHHHHH NRLSQGDIKIRRITIREDLNLKEIAAHLAALHLVDEKKFLALTTDRTFLRSLGIEGDTAE HHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCCCCCCC GYLYPDTYFFDSAISPGQIIRRMVEQFWKVVTPEMREKVQQMGMTMNEFVTLASLIGKET CEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCC GFSDEKPLIAAVFHNRLKKGMRLQSDPTAVYHMAPFDGEIKRRHLLLMTPYNTYHIEGLP CCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCEEEECCCC PGPIANPGRDSLLAAVTPAKVDYLYFVSNCNGSHQFSSTLKEHNQAVVRYRLAKGKVE CCCCCCCCCCCEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 1644759; 8631667 [H]