Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85858440

Identifier: 85858440

GI number: 85858440

Start: 595402

End: 596385

Strand: Direct

Name: 85858440

Synonym: SYN_02250

Alternate gene names: NA

Gene position: 595402-596385 (Clockwise)

Preceding gene: 85858439

Following gene: 85858441

Centisome position: 18.73

GC content: 43.6

Gene sequence:

>984_bases
TTGCCGACTTTCTTGGAGGTTAGGAAGGAAATGACTGATTGGTACAGTTTCAAGCCACAAGACACGTTATATTTCCGCGG
TGCGGAACCGGCAAACATGGGTGAAAGTCATGCGGCATCCATGATTTTTCCTCCACCCGCCCATACCATTGCCGGTGCTT
TGCGGACTGCTACAATCATTCAAAATGATGTAGCCTTTGAAGATTATAAAAAAGGTTTGTGTTCGCAAGAGGTTACTGAT
GCAATCGGCAAATCAGGAGAAGACAGCCCTTTCAGCATTCTTGGTCCCTTCTTTCAATACCAAGAAAAGACATGGATTCC
CTGCCCGTTTCTTTGGTTTTCTGAAAAGAAAAAGACCGCAGAAGACTCACAGTCAAGACTACGTAAGATCATGGTCAGCG
CCCCTCTTCACAACAACATTATGGTGAAAACGGCCAGCGGGAAAAATCTCTTATGGGTTAAGGGGAAAAACCTTGAAAAT
CTCGGAAACCAATGGGTTAGTGCTGATGAATTATGCAAGGAAGCAGAAGAGAAAACGATTAGAGAAAGCAAAGATTTCTT
CGTAAGCGAAACCCATACTGGAATAGCCCTTGACGTGAAGGTTAAACGGCGCACGGCGAGAGAGGGGCATCTCTATTCAT
TTGTCCATGCCCGCTTACATCAGGATGTTGAATTGATCTTTGGGGTTACGCGGAGACTGCCGATAAATGATTCCGGCGTC
CTCAAGCTTGGGGCTGAACAGAGATTTGGTGAATACAAAAAAATAAATGATATTCATTTATCAAAAGGAACAACAAATTT
TTTCATGACATTGTCCATTTTGGAGGGCAATAGAGAAACTAATCGGCATTGCATTGCCACAGGTCGTATTCGCTATCTTG
GAGGTTGGGATCTGCACAAAGGGTTTCACAAACCGATGAGGGGATACTTTCCCGCAGGAACCGTATTTGACAAAAAAATC
AATGAATCATGTATCCAATTATAG

Upstream 100 bases:

>100_bases
GAATCATTGGAAAATAAAGAACTCATAGCCCGTTCGATCGCCTACATCGTATGGGACAAGAACAATCATAAAAACCCTTT
CAATCCAGAGGGATTGATGA

Downstream 100 bases:

>100_bases
GAGAAACGCCATGCTGAAAAGAGGTCTTTTTTCCATCTGTACATTTTATGCCGTATCGCCCATCCATGCCGGCAGCGGGT
CATCGTTCGCCGCCGTTGAT

Product: cytoplasmic protein

Products: NA

Alternate protein names: Cytoplasmic Protein

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MPTFLEVRKEMTDWYSFKPQDTLYFRGAEPANMGESHAASMIFPPPAHTIAGALRTATIIQNDVAFEDYKKGLCSQEVTD
AIGKSGEDSPFSILGPFFQYQEKTWIPCPFLWFSEKKKTAEDSQSRLRKIMVSAPLHNNIMVKTASGKNLLWVKGKNLEN
LGNQWVSADELCKEAEEKTIRESKDFFVSETHTGIALDVKVKRRTAREGHLYSFVHARLHQDVELIFGVTRRLPINDSGV
LKLGAEQRFGEYKKINDIHLSKGTTNFFMTLSILEGNRETNRHCIATGRIRYLGGWDLHKGFHKPMRGYFPAGTVFDKKI
NESCIQL

Sequences:

>Translated_327_residues
MPTFLEVRKEMTDWYSFKPQDTLYFRGAEPANMGESHAASMIFPPPAHTIAGALRTATIIQNDVAFEDYKKGLCSQEVTD
AIGKSGEDSPFSILGPFFQYQEKTWIPCPFLWFSEKKKTAEDSQSRLRKIMVSAPLHNNIMVKTASGKNLLWVKGKNLEN
LGNQWVSADELCKEAEEKTIRESKDFFVSETHTGIALDVKVKRRTAREGHLYSFVHARLHQDVELIFGVTRRLPINDSGV
LKLGAEQRFGEYKKINDIHLSKGTTNFFMTLSILEGNRETNRHCIATGRIRYLGGWDLHKGFHKPMRGYFPAGTVFDKKI
NESCIQL
>Mature_326_residues
PTFLEVRKEMTDWYSFKPQDTLYFRGAEPANMGESHAASMIFPPPAHTIAGALRTATIIQNDVAFEDYKKGLCSQEVTDA
IGKSGEDSPFSILGPFFQYQEKTWIPCPFLWFSEKKKTAEDSQSRLRKIMVSAPLHNNIMVKTASGKNLLWVKGKNLENL
GNQWVSADELCKEAEEKTIRESKDFFVSETHTGIALDVKVKRRTAREGHLYSFVHARLHQDVELIFGVTRRLPINDSGVL
KLGAEQRFGEYKKINDIHLSKGTTNFFMTLSILEGNRETNRHCIATGRIRYLGGWDLHKGFHKPMRGYFPAGTVFDKKIN
ESCIQL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37213; Mature: 37082

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTFLEVRKEMTDWYSFKPQDTLYFRGAEPANMGESHAASMIFPPPAHTIAGALRTATII
CCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHCCCEEECCCHHHHHHHHHHHHHH
QNDVAFEDYKKGLCSQEVTDAIGKSGEDSPFSILGPFFQYQEKTWIPCPFLWFSEKKKTA
HCCCCHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCH
EDSQSRLRKIMVSAPLHNNIMVKTASGKNLLWVKGKNLENLGNQWVSADELCKEAEEKTI
HHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCHHHHHHHCCCHHHHHHHHHHHHH
RESKDFFVSETHTGIALDVKVKRRTAREGHLYSFVHARLHQDVELIFGVTRRLPINDSGV
HHCCCCEEEECCCCEEEEEEEHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCE
LKLGAEQRFGEYKKINDIHLSKGTTNFFMTLSILEGNRETNRHCIATGRIRYLGGWDLHK
EEECCHHHCCCHHCCCEEEECCCCCEEEEEEEEEECCCCCCCEEEEECCEEEECCCHHHH
GFHKPMRGYFPAGTVFDKKINESCIQL
HHHHHHHCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
PTFLEVRKEMTDWYSFKPQDTLYFRGAEPANMGESHAASMIFPPPAHTIAGALRTATII
CCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHCCCEEECCCHHHHHHHHHHHHHH
QNDVAFEDYKKGLCSQEVTDAIGKSGEDSPFSILGPFFQYQEKTWIPCPFLWFSEKKKTA
HCCCCHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCH
EDSQSRLRKIMVSAPLHNNIMVKTASGKNLLWVKGKNLENLGNQWVSADELCKEAEEKTI
HHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCHHHHHHHCCCHHHHHHHHHHHHH
RESKDFFVSETHTGIALDVKVKRRTAREGHLYSFVHARLHQDVELIFGVTRRLPINDSGV
HHCCCCEEEECCCCEEEEEEEHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCE
LKLGAEQRFGEYKKINDIHLSKGTTNFFMTLSILEGNRETNRHCIATGRIRYLGGWDLHK
EEECCHHHCCCHHCCCEEEECCCCCEEEEEEEEEECCCCCCCEEEEECCEEEECCCHHHH
GFHKPMRGYFPAGTVFDKKINESCIQL
HHHHHHHCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA