Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85858439

Identifier: 85858439

GI number: 85858439

Start: 592716

End: 595424

Strand: Direct

Name: 85858439

Synonym: SYN_02251

Alternate gene names: NA

Gene position: 592716-595424 (Clockwise)

Preceding gene: 85858438

Following gene: 85858440

Centisome position: 18.64

GC content: 45.51

Gene sequence:

>2709_bases
ATGACATGGCAGATACCTGATACATCCTACTGGGAAAACAAGTTTGCCGCCTACTGGCATGACCCTATCGATAAAGTCAT
CAGCATTCAAAACCACGAAGAAAGGGCTGCTGATTATTTGCAGATATTCGGAATCGACAGACCGAACGATGAATTCTGGC
AAATGGCTGATGCCATCGCTGCCGGTTTTGAGCGGGGGCAGGTTCCCTCACATAGTACTGACGATACTAAAAATGGGGCT
GTAGACTTTGCTGAGTCACCGGTTATTACGCATCCGACTACCGGGAAAAAAGGTTTGCTGAAGATTACAGGTGTGAAGAT
GCATATTAATGACCTTCATGCCGCCATCATGGAATTTCTGGGAAAACATATTGGAAAAGAAGCAGGAAATGGCGATTATG
CAGATTGTTTTAAGGGTGATTACGCACGATTTGCCGTTGCCCGGTTTCTCTATACCCATCTCGTTTTGCGTTTTATCCTT
GCTGAAAAGAACATCGGCGGACTTGGCGCACTTTGGCACCGCATCCCTGCTGATTCCCGGTTTCCCGACCATTCCATCTG
GCAGCACAACGCGCTGTGTTCCGCCATCAGTTCCTGTGTTGAACTTGGCGGTAGAGCAGAAGAAGTCAGTCTCATGGTAT
TTTCCATTACACCGGTTCAAGGATTTATCGCTCGTGCCAGAAAGATGCGCGATTATTGGACAGGTTCTGTTCTCTTGTCC
TGGCTGGCCTTTGAAGGGCTTCGCTGGGTGATGGAGAATTTGGGGGCAGACCATATCCTGTATCCTTCCTTGATAGACCA
ACCACTTGTAAACAATTATCTGGAAAAAGAATGGAATGTCTCAGGTCCATTCAAACCTGAAATTTGGAATAATCAGCCCA
ATGAAATCGCCAGCCTGCCGAATAAATTTCTATTCCTTATTCCTTTCGGCAAAGCGGATGAAATAGCTGCAGAGTTGGAA
AAAGCCATTTCGGAAAAATGGGCTGCAGTTGCCGACAAGGTAGCCGCTTATCTGATTGACAGGATAAGCATGGGCAATGA
TGGCAGAGAACATATCCAAGAGATGTTTAAACGTCAGACTTCCGGATTCTGGGATTTCCAGTGGGCTGCGACCCGCCTTG
CCGATTATACGGACAAAAAAGAATTGGAATCTCTACTCGACGAAACCCAGTGGAAAGATCAATTTGCTTACATGGAAGCA
ATTCAACCAATTTTAAATAAAAAAGGATATTCTTCAGAAAATACCAGCAGAGGAATTCTTTATTCCACAAGCCACAGTCT
GGTGCAATCGGCCCTTGCCGCAGAGAAGTCGATAAGATCGGTAGCGCGGACAGAAGAACCGGGAGAAAAATGCCAGATGT
GCAGCGAATTCGAGGTTTTGCATTCCAAGCAATGGAATGGTGAAGTTGCAGGCCATTATGCCGACCATCTTAAGGAATTT
TGGAGCCAGCTTAATCCAGAGCAAAAGGACGATGTTGATTTTAAAGAGAATGAACGGCTTTGTTCCGTTTGTTTAATCAA
ACGTCTTGCCCCGCATATTTTGAAAAATTCAAATGACCATATTCTTTGTAACGTTTTCCGTTCCATCGACAACGTTCCTT
CAACAACGGAAATGGCGCTTCATAACTATTTTCAAAGATTTGGCATTACCGATAAAAAAGACCAAAGGGTTATTGCTCAG
AAACTCCACAAAGATGAAGAGCATGTCAGGGGCGAAAAGATCGATAACAGAGACAAATACTACGCTCTTCTCATGATGGA
TGGAGACAATATGGGGAAACTGATCAACGGGGAAACGATTGCCTCATGCTGGAAGAAGATTATGCATCCCCAAATTGCTG
AACGATTAACGGGAGTCGACTTTTATCCTTTGTATCGAGACGTCTGGCAGAAGATTTACGGCAATGCCGGGTTGAATAAA
AGATTGGTTACACCGGCAATTCACGCGGCCATATCGGAAGCTTTGGGCGATTTCTCCATCTATGGCGTCGCGTCCATCAT
AAAGGATCATGATGGACGCTTGATCTACGCGGGCGGCGACGATGTCTACGCATTTCTCCCTATCGGCTCTGCACTGCCGG
CGGCACGTAAAATCAGAGATTACTACACATCCATATTTCGCTATGTAAGTATGGATCGCACATCTAAGCCGATTACAGAG
AAAGAATGGATGCCCGAACGAGGAAAGCTTTCCGTAAATCTCGGCATCGGCAATGAAATATCCATATCCGCCGCCATTCT
AATTTGTCACCACAAGGAAAGCCTTACCCAAATGATTGAACGGGCACATCAATTATTACAATCGCAAGCAAAGGATAAGG
CTGAACGTAATGCATGCGCGATTGAACTGCGAAAACGTCACGGCGGCTCCCGTTATTTCACAAGGAAGTGGGCAGATAAA
GAAACCTGGGACGCTTTCGAATTCATTGGGAAGATGACGGAAGAGAATCATCGCCAAGTTTCCCGCTCCCTTTTGTATCG
TCTCGAAACCCTACGGCCCGGCATCGAAGCAATTATGATACAAGACACGAAGGCGGAGGAAAATCTGAACGCGTTCATAG
CAAAACAAATCGAACGATCGGGTACTGAATCATTGGAAAATAAAGAACTCATAGCCCGTTCGATCGCCTACATCGTATGG
GACAAGAACAATCATAAAAACCCTTTCAATCCAGAGGGATTGATGATTGCCGACTTTCTTGGAGGTTAG

Upstream 100 bases:

>100_bases
TGCCCTATGAGTACTACGATGAAAAGAAACGACAAGATTACTTTAGGTTATGTAATAAAGTGAACGAGATACTAAAAAAA
TAATTTAGTGGAGACATAAA

Downstream 100 bases:

>100_bases
GAAGGAAATGACTGATTGGTACAGTTTCAAGCCACAAGACACGTTATATTTCCGCGGTGCGGAACCGGCAAACATGGGTG
AAAGTCATGCGGCATCCATG

Product: HD superfamily hydrolase

Products: NA

Alternate protein names: CRISPR-Associated RAMP Crm2 Family Protein; Crm2 Family CRISPR-Associated Protein; CRISPR-Associated Protein; HD Superfamily Hydrolase; Crispr-Associated Protein Crm2 Family; HD Family Hydrolase; CRISPR-Associated Cmr2 Family Protein; Hydrolase

Number of amino acids: Translated: 902; Mature: 901

Protein sequence:

>902_residues
MTWQIPDTSYWENKFAAYWHDPIDKVISIQNHEERAADYLQIFGIDRPNDEFWQMADAIAAGFERGQVPSHSTDDTKNGA
VDFAESPVITHPTTGKKGLLKITGVKMHINDLHAAIMEFLGKHIGKEAGNGDYADCFKGDYARFAVARFLYTHLVLRFIL
AEKNIGGLGALWHRIPADSRFPDHSIWQHNALCSAISSCVELGGRAEEVSLMVFSITPVQGFIARARKMRDYWTGSVLLS
WLAFEGLRWVMENLGADHILYPSLIDQPLVNNYLEKEWNVSGPFKPEIWNNQPNEIASLPNKFLFLIPFGKADEIAAELE
KAISEKWAAVADKVAAYLIDRISMGNDGREHIQEMFKRQTSGFWDFQWAATRLADYTDKKELESLLDETQWKDQFAYMEA
IQPILNKKGYSSENTSRGILYSTSHSLVQSALAAEKSIRSVARTEEPGEKCQMCSEFEVLHSKQWNGEVAGHYADHLKEF
WSQLNPEQKDDVDFKENERLCSVCLIKRLAPHILKNSNDHILCNVFRSIDNVPSTTEMALHNYFQRFGITDKKDQRVIAQ
KLHKDEEHVRGEKIDNRDKYYALLMMDGDNMGKLINGETIASCWKKIMHPQIAERLTGVDFYPLYRDVWQKIYGNAGLNK
RLVTPAIHAAISEALGDFSIYGVASIIKDHDGRLIYAGGDDVYAFLPIGSALPAARKIRDYYTSIFRYVSMDRTSKPITE
KEWMPERGKLSVNLGIGNEISISAAILICHHKESLTQMIERAHQLLQSQAKDKAERNACAIELRKRHGGSRYFTRKWADK
ETWDAFEFIGKMTEENHRQVSRSLLYRLETLRPGIEAIMIQDTKAEENLNAFIAKQIERSGTESLENKELIARSIAYIVW
DKNNHKNPFNPEGLMIADFLGG

Sequences:

>Translated_902_residues
MTWQIPDTSYWENKFAAYWHDPIDKVISIQNHEERAADYLQIFGIDRPNDEFWQMADAIAAGFERGQVPSHSTDDTKNGA
VDFAESPVITHPTTGKKGLLKITGVKMHINDLHAAIMEFLGKHIGKEAGNGDYADCFKGDYARFAVARFLYTHLVLRFIL
AEKNIGGLGALWHRIPADSRFPDHSIWQHNALCSAISSCVELGGRAEEVSLMVFSITPVQGFIARARKMRDYWTGSVLLS
WLAFEGLRWVMENLGADHILYPSLIDQPLVNNYLEKEWNVSGPFKPEIWNNQPNEIASLPNKFLFLIPFGKADEIAAELE
KAISEKWAAVADKVAAYLIDRISMGNDGREHIQEMFKRQTSGFWDFQWAATRLADYTDKKELESLLDETQWKDQFAYMEA
IQPILNKKGYSSENTSRGILYSTSHSLVQSALAAEKSIRSVARTEEPGEKCQMCSEFEVLHSKQWNGEVAGHYADHLKEF
WSQLNPEQKDDVDFKENERLCSVCLIKRLAPHILKNSNDHILCNVFRSIDNVPSTTEMALHNYFQRFGITDKKDQRVIAQ
KLHKDEEHVRGEKIDNRDKYYALLMMDGDNMGKLINGETIASCWKKIMHPQIAERLTGVDFYPLYRDVWQKIYGNAGLNK
RLVTPAIHAAISEALGDFSIYGVASIIKDHDGRLIYAGGDDVYAFLPIGSALPAARKIRDYYTSIFRYVSMDRTSKPITE
KEWMPERGKLSVNLGIGNEISISAAILICHHKESLTQMIERAHQLLQSQAKDKAERNACAIELRKRHGGSRYFTRKWADK
ETWDAFEFIGKMTEENHRQVSRSLLYRLETLRPGIEAIMIQDTKAEENLNAFIAKQIERSGTESLENKELIARSIAYIVW
DKNNHKNPFNPEGLMIADFLGG
>Mature_901_residues
TWQIPDTSYWENKFAAYWHDPIDKVISIQNHEERAADYLQIFGIDRPNDEFWQMADAIAAGFERGQVPSHSTDDTKNGAV
DFAESPVITHPTTGKKGLLKITGVKMHINDLHAAIMEFLGKHIGKEAGNGDYADCFKGDYARFAVARFLYTHLVLRFILA
EKNIGGLGALWHRIPADSRFPDHSIWQHNALCSAISSCVELGGRAEEVSLMVFSITPVQGFIARARKMRDYWTGSVLLSW
LAFEGLRWVMENLGADHILYPSLIDQPLVNNYLEKEWNVSGPFKPEIWNNQPNEIASLPNKFLFLIPFGKADEIAAELEK
AISEKWAAVADKVAAYLIDRISMGNDGREHIQEMFKRQTSGFWDFQWAATRLADYTDKKELESLLDETQWKDQFAYMEAI
QPILNKKGYSSENTSRGILYSTSHSLVQSALAAEKSIRSVARTEEPGEKCQMCSEFEVLHSKQWNGEVAGHYADHLKEFW
SQLNPEQKDDVDFKENERLCSVCLIKRLAPHILKNSNDHILCNVFRSIDNVPSTTEMALHNYFQRFGITDKKDQRVIAQK
LHKDEEHVRGEKIDNRDKYYALLMMDGDNMGKLINGETIASCWKKIMHPQIAERLTGVDFYPLYRDVWQKIYGNAGLNKR
LVTPAIHAAISEALGDFSIYGVASIIKDHDGRLIYAGGDDVYAFLPIGSALPAARKIRDYYTSIFRYVSMDRTSKPITEK
EWMPERGKLSVNLGIGNEISISAAILICHHKESLTQMIERAHQLLQSQAKDKAERNACAIELRKRHGGSRYFTRKWADKE
TWDAFEFIGKMTEENHRQVSRSLLYRLETLRPGIEAIMIQDTKAEENLNAFIAKQIERSGTESLENKELIARSIAYIVWD
KNNHKNPFNPEGLMIADFLGG

Specific function: Unknown

COG id: COG1353

COG function: function code R; Predicted hydrolase of the HD superfamily (permuted catalytic motifs)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 102863; Mature: 102732

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTWQIPDTSYWENKFAAYWHDPIDKVISIQNHEERAADYLQIFGIDRPNDEFWQMADAIA
CCCCCCCCCHHCCCHHHHHHCHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH
AGFERGQVPSHSTDDTKNGAVDFAESPVITHPTTGKKGLLKITGVKMHINDLHAAIMEFL
HHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEEEEEHHHHHHHHHHHH
GKHIGKEAGNGDYADCFKGDYARFAVARFLYTHLVLRFILAEKNIGGLGALWHRIPADSR
HHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCC
FPDHSIWQHNALCSAISSCVELGGRAEEVSLMVFSITPVQGFIARARKMRDYWTGSVLLS
CCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHH
WLAFEGLRWVMENLGADHILYPSLIDQPLVNNYLEKEWNVSGPFKPEIWNNQPNEIASLP
HHHHHHHHHHHHHCCCCCEECHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCC
NKFLFLIPFGKADEIAAELEKAISEKWAAVADKVAAYLIDRISMGNDGREHIQEMFKRQT
CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
SGFWDFQWAATRLADYTDKKELESLLDETQWKDQFAYMEAIQPILNKKGYSSENTSRGIL
CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEE
YSTSHSLVQSALAAEKSIRSVARTEEPGEKCQMCSEFEVLHSKQWNGEVAGHYADHLKEF
EECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
WSQLNPEQKDDVDFKENERLCSVCLIKRLAPHILKNSNDHILCNVFRSIDNVPSTTEMAL
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCHHHHHH
HNYFQRFGITDKKDQRVIAQKLHKDEEHVRGEKIDNRDKYYALLMMDGDNMGKLINGETI
HHHHHHCCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCHHH
ASCWKKIMHPQIAERLTGVDFYPLYRDVWQKIYGNAGLNKRLVTPAIHAAISEALGDFSI
HHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHH
YGVASIIKDHDGRLIYAGGDDVYAFLPIGSALPAARKIRDYYTSIFRYVSMDRTSKPITE
HHHHHHHHCCCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCH
KEWMPERGKLSVNLGIGNEISISAAILICHHKESLTQMIERAHQLLQSQAKDKAERNACA
HHCCCCCCCEEEEECCCCCEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
IELRKRHGGSRYFTRKWADKETWDAFEFIGKMTEENHRQVSRSLLYRLETLRPGIEAIMI
HHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
QDTKAEENLNAFIAKQIERSGTESLENKELIARSIAYIVWDKNNHKNPFNPEGLMIADFL
ECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCEEEECCC
GG
CC
>Mature Secondary Structure 
TWQIPDTSYWENKFAAYWHDPIDKVISIQNHEERAADYLQIFGIDRPNDEFWQMADAIA
CCCCCCCCHHCCCHHHHHHCHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH
AGFERGQVPSHSTDDTKNGAVDFAESPVITHPTTGKKGLLKITGVKMHINDLHAAIMEFL
HHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEEEEEHHHHHHHHHHHH
GKHIGKEAGNGDYADCFKGDYARFAVARFLYTHLVLRFILAEKNIGGLGALWHRIPADSR
HHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCC
FPDHSIWQHNALCSAISSCVELGGRAEEVSLMVFSITPVQGFIARARKMRDYWTGSVLLS
CCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHH
WLAFEGLRWVMENLGADHILYPSLIDQPLVNNYLEKEWNVSGPFKPEIWNNQPNEIASLP
HHHHHHHHHHHHHCCCCCEECHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCC
NKFLFLIPFGKADEIAAELEKAISEKWAAVADKVAAYLIDRISMGNDGREHIQEMFKRQT
CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
SGFWDFQWAATRLADYTDKKELESLLDETQWKDQFAYMEAIQPILNKKGYSSENTSRGIL
CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEE
YSTSHSLVQSALAAEKSIRSVARTEEPGEKCQMCSEFEVLHSKQWNGEVAGHYADHLKEF
EECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
WSQLNPEQKDDVDFKENERLCSVCLIKRLAPHILKNSNDHILCNVFRSIDNVPSTTEMAL
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCHHHHHH
HNYFQRFGITDKKDQRVIAQKLHKDEEHVRGEKIDNRDKYYALLMMDGDNMGKLINGETI
HHHHHHCCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCHHH
ASCWKKIMHPQIAERLTGVDFYPLYRDVWQKIYGNAGLNKRLVTPAIHAAISEALGDFSI
HHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHH
YGVASIIKDHDGRLIYAGGDDVYAFLPIGSALPAARKIRDYYTSIFRYVSMDRTSKPITE
HHHHHHHHCCCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCH
KEWMPERGKLSVNLGIGNEISISAAILICHHKESLTQMIERAHQLLQSQAKDKAERNACA
HHCCCCCCCEEEEECCCCCEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
IELRKRHGGSRYFTRKWADKETWDAFEFIGKMTEENHRQVSRSLLYRLETLRPGIEAIMI
HHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
QDTKAEENLNAFIAKQIERSGTESLENKELIARSIAYIVWDKNNHKNPFNPEGLMIADFL
ECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCEEEECCC
GG
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA