Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85858422

Identifier: 85858422

GI number: 85858422

Start: 573393

End: 573746

Strand: Direct

Name: 85858422

Synonym: SYN_03386

Alternate gene names: NA

Gene position: 573393-573746 (Clockwise)

Preceding gene: 85858421

Following gene: 85858423

Centisome position: 18.04

GC content: 57.06

Gene sequence:

>354_bases
ATGACCATGGGTGAGCGATTTGTCAGCGAGGTCATCTCCCCTGTCGTTTCCACGTGTGACACGTCCCGCATGGCCATCGG
GGAGCCCGGACTTCCCCGGGAGTTTCTCTGGCGGGATCGGACCCTCCGGATTGCTGAGGTTCTGCGGACGTGGCGGGAAA
CCGGGAAGTGCCGTCATGGCAGCCCCGAACGGTATGTCCGCAAACACTGGTTCGAGGTGATCACGACGGCTAATGACATT
ATGAACATCTATTTCGAAAGACAGTCCCATCGTGGAAAGAAGGGGGACCGATGGTGGCTGTTCAGCATCCGGGAAGCAGA
GGAAGAGAGGAAGGAGGATTCTTTTCATCCTTGA

Upstream 100 bases:

>100_bases
TAAAACCGTGGGCTGGACCAGTCTCTTTCTGTTTTCTCTCTATCTCCTCAACTCACTTGTCCTTTATCTCTATGGAAAAT
AAGCATGGCAGGAAAAGGGG

Downstream 100 bases:

>100_bases
CAAAAGCAATTTATTTTTAGATAGATTGCGCTTGCCGATAAATAAAACCGCCAGCATCTTTCCTGTTGTGTTGCCTGGTA
TTTCAGATCACGGTTTCCCG

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MTMGERFVSEVISPVVSTCDTSRMAIGEPGLPREFLWRDRTLRIAEVLRTWRETGKCRHGSPERYVRKHWFEVITTANDI
MNIYFERQSHRGKKGDRWWLFSIREAEEERKEDSFHP

Sequences:

>Translated_117_residues
MTMGERFVSEVISPVVSTCDTSRMAIGEPGLPREFLWRDRTLRIAEVLRTWRETGKCRHGSPERYVRKHWFEVITTANDI
MNIYFERQSHRGKKGDRWWLFSIREAEEERKEDSFHP
>Mature_116_residues
TMGERFVSEVISPVVSTCDTSRMAIGEPGLPREFLWRDRTLRIAEVLRTWRETGKCRHGSPERYVRKHWFEVITTANDIM
NIYFERQSHRGKKGDRWWLFSIREAEEERKEDSFHP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14044; Mature: 13913

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMGERFVSEVISPVVSTCDTSRMAIGEPGLPREFLWRDRTLRIAEVLRTWRETGKCRHG
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCC
SPERYVRKHWFEVITTANDIMNIYFERQSHRGKKGDRWWLFSIREAEEERKEDSFHP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TMGERFVSEVISPVVSTCDTSRMAIGEPGLPREFLWRDRTLRIAEVLRTWRETGKCRHG
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCC
SPERYVRKHWFEVITTANDIMNIYFERQSHRGKKGDRWWLFSIREAEEERKEDSFHP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA