Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85858393

Identifier: 85858393

GI number: 85858393

Start: 547275

End: 548354

Strand: Direct

Name: 85858393

Synonym: SYN_03379

Alternate gene names: NA

Gene position: 547275-548354 (Clockwise)

Preceding gene: 85858392

Following gene: 85858394

Centisome position: 17.21

GC content: 61.2

Gene sequence:

>1080_bases
ATGACTGCTTTAGCAGATGACAAGAAAACCGAATACCGGGAAGGCGTCGAGATTTCCATTCCTGTCGATGACGGAGACAA
GATTTATGCCGGCGCGATGGTCTGCGCCAATGCCGACGGTTACGCCGTTCCCGGCGCCGATACGGCAGGGTTGATCTTCA
TGGGCATCGCCCGTGAACAGGCCGACAACGCATCCGGCCAGGCCGGCGACATCAGTGTTCTGGTCCGTCGGCGCGGCCTG
TTCAAGATGTCCTTTGCTACGGCGATTACCGAGGCCAACGTGGGAGACAGCGTCTATATTGCCGACGATCAGAATGTCGA
TCTGGTCGGGAACGTGACCAACGACATTTTCGCGGGAATTATTGCCGAATACATCGACACGACCCACGCCTGGGTGGACA
TCGAACCGGCCGTCCGGCAGTCGGATGCCGCCGCGCACATCGCCGACGGGAACGCCGCCCATGCAGCCAGCGCGATCTCC
ATTGCCGACGCGGGATCGTTCACCTCCCAGACCGAAGTGGAGGCGGCCCTGCAGGAGATTTACCAGCATCTGAAAAGCGC
GAAGGGGATTATCGATATCCCGATCCCGTATTTTACGAATGCAGGCGTAGCCCTCGCCGCTTTTTCCGACGGCGCCAGCG
CCACTCCCGGATTCTGTGTCACGGCGAAGGGTCTGGGGATCCGCTGGAACAACCACGCCACGCCCGGCGCGGTGGGAACG
AAGGTTATCGTTCCCCCCGACATGGATGTGACCGCGAACGCGGTTCTGCACGTCCTTGCCGCAAAGACCGGCGCAACGGT
TGGCGACGCCACGAAGTTCACCGTCGCGGCTTACAACAACGTGGTTGACGCGGCCTACGACGCGGATGACGACTTCGGTG
GCGACACCAGCGCCATGACCGGCGACGCCACGGCCAAAACGGTCCAGCACGAATCGCTCACCCTGGCCCTGGCCAACCTG
GCAGCCTATCCGGCGGCGATGGAGTTGACCATCAAACCGAAGGACGGCACGCTCGGAACGGACGATGTGATCCTGCTGGC
GGTCTGGATCGAATACAAGAAGAAGCTGCTGACGGCGTAA

Upstream 100 bases:

>100_bases
TGGACGATGCCCAGAAGAGCATCAACGCGATGATGGGCATCGATGAAGACACGTTCAAAAAATACAACCAGTAGCCCTGA
GCGGGGGAAGGAGGAATAGC

Downstream 100 bases:

>100_bases
CATGAACCATGAACCGGGAGAGAGCGCCGCTCTCTCCCGAAAACCGGAAAAGGAGTGCATGACATGATTGTCAATCAAGC
GAATCTGCAGGGAATTTACA

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 358

Protein sequence:

>359_residues
MTALADDKKTEYREGVEISIPVDDGDKIYAGAMVCANADGYAVPGADTAGLIFMGIAREQADNASGQAGDISVLVRRRGL
FKMSFATAITEANVGDSVYIADDQNVDLVGNVTNDIFAGIIAEYIDTTHAWVDIEPAVRQSDAAAHIADGNAAHAASAIS
IADAGSFTSQTEVEAALQEIYQHLKSAKGIIDIPIPYFTNAGVALAAFSDGASATPGFCVTAKGLGIRWNNHATPGAVGT
KVIVPPDMDVTANAVLHVLAAKTGATVGDATKFTVAAYNNVVDAAYDADDDFGGDTSAMTGDATAKTVQHESLTLALANL
AAYPAAMELTIKPKDGTLGTDDVILLAVWIEYKKKLLTA

Sequences:

>Translated_359_residues
MTALADDKKTEYREGVEISIPVDDGDKIYAGAMVCANADGYAVPGADTAGLIFMGIAREQADNASGQAGDISVLVRRRGL
FKMSFATAITEANVGDSVYIADDQNVDLVGNVTNDIFAGIIAEYIDTTHAWVDIEPAVRQSDAAAHIADGNAAHAASAIS
IADAGSFTSQTEVEAALQEIYQHLKSAKGIIDIPIPYFTNAGVALAAFSDGASATPGFCVTAKGLGIRWNNHATPGAVGT
KVIVPPDMDVTANAVLHVLAAKTGATVGDATKFTVAAYNNVVDAAYDADDDFGGDTSAMTGDATAKTVQHESLTLALANL
AAYPAAMELTIKPKDGTLGTDDVILLAVWIEYKKKLLTA
>Mature_358_residues
TALADDKKTEYREGVEISIPVDDGDKIYAGAMVCANADGYAVPGADTAGLIFMGIAREQADNASGQAGDISVLVRRRGLF
KMSFATAITEANVGDSVYIADDQNVDLVGNVTNDIFAGIIAEYIDTTHAWVDIEPAVRQSDAAAHIADGNAAHAASAISI
ADAGSFTSQTEVEAALQEIYQHLKSAKGIIDIPIPYFTNAGVALAAFSDGASATPGFCVTAKGLGIRWNNHATPGAVGTK
VIVPPDMDVTANAVLHVLAAKTGATVGDATKFTVAAYNNVVDAAYDADDDFGGDTSAMTGDATAKTVQHESLTLALANLA
AYPAAMELTIKPKDGTLGTDDVILLAVWIEYKKKLLTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37189; Mature: 37058

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALADDKKTEYREGVEISIPVDDGDKIYAGAMVCANADGYAVPGADTAGLIFMGIAREQ
CCCCCCCCCHHHHCCCEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEHHHH
ADNASGQAGDISVLVRRRGLFKMSFATAITEANVGDSVYIADDQNVDLVGNVTNDIFAGI
CCCCCCCCCCEEEEEECCCCEEEHHHHHHHCCCCCCEEEEECCCCEEEEECCHHHHHHHH
IAEYIDTTHAWVDIEPAVRQSDAAAHIADGNAAHAASAISIADAGSFTSQTEVEAALQEI
HHHHHCCCCEEEECCHHHCCCCCEEEECCCCCHHHHHEEEEECCCCCCCHHHHHHHHHHH
YQHLKSAKGIIDIPIPYFTNAGVALAAFSDGASATPGFCVTAKGLGIRWNNHATPGAVGT
HHHHHHCCCEEEECCCCCCCCCEEEEEECCCCCCCCCEEEEECCCEEEECCCCCCCCCCC
KVIVPPDMDVTANAVLHVLAAKTGATVGDATKFTVAAYNNVVDAAYDADDDFGGDTSAMT
EEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCC
GDATAKTVQHESLTLALANLAAYPAAMELTIKPKDGTLGTDDVILLAVWIEYKKKLLTA
CCCHHHHEEHHHHEEEHHHHHCCCEEEEEEEECCCCCCCCCCCEEHHHHHHHHHHHHCC
>Mature Secondary Structure 
TALADDKKTEYREGVEISIPVDDGDKIYAGAMVCANADGYAVPGADTAGLIFMGIAREQ
CCCCCCCCHHHHCCCEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEHHHH
ADNASGQAGDISVLVRRRGLFKMSFATAITEANVGDSVYIADDQNVDLVGNVTNDIFAGI
CCCCCCCCCCEEEEEECCCCEEEHHHHHHHCCCCCCEEEEECCCCEEEEECCHHHHHHHH
IAEYIDTTHAWVDIEPAVRQSDAAAHIADGNAAHAASAISIADAGSFTSQTEVEAALQEI
HHHHHCCCCEEEECCHHHCCCCCEEEECCCCCHHHHHEEEEECCCCCCCHHHHHHHHHHH
YQHLKSAKGIIDIPIPYFTNAGVALAAFSDGASATPGFCVTAKGLGIRWNNHATPGAVGT
HHHHHHCCCEEEECCCCCCCCCEEEEEECCCCCCCCCEEEEECCCEEEECCCCCCCCCCC
KVIVPPDMDVTANAVLHVLAAKTGATVGDATKFTVAAYNNVVDAAYDADDDFGGDTSAMT
EEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCC
GDATAKTVQHESLTLALANLAAYPAAMELTIKPKDGTLGTDDVILLAVWIEYKKKLLTA
CCCHHHHEEHHHHEEEHHHHHCCCEEEEEEEECCCCCCCCCCCEEHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA