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The map label for this gene is 85858394

Identifier: 85858394

GI number: 85858394

Start: 548418

End: 549296

Strand: Direct

Name: 85858394

Synonym: SYN_02298

Alternate gene names: NA

Gene position: 548418-549296 (Clockwise)

Preceding gene: 85858393

Following gene: 85858395

Centisome position: 17.25

GC content: 58.93

Gene sequence:

>879_bases
ATGATTGTCAATCAAGCGAATCTGCAGGGAATTTACAAATCCTTCAACACGATCTTCAACCAGGCATTCGATGCTGCCCC
CAGCCAATGGCCCCTGGTGGCCATGCAGGTGCCGTCCACGGGGCGCAGCGTGGATTACAAATGGCTGGGCGATTTCCCCA
TGATGCGGGAGTGGCTCGGCGACCGGGTTTTAAAGGACCTGTCCGCCTTCAAGTACGAAATCACCAACAAGGACTATGAA
TCCACCATCGAGGTGGACCGCAACGATATCGACGACGATCAGATCGGCGTCTACACGCCCATGATTCAGGGGCTTGCCCA
GGCCGCGAAAGTGCACCCGGACATCCTGGTCTTCGCCCTCCTCAAAGCGGGATTCGACACGGGATGTTTCGACGGACAGT
ATTTTTTCGACAGCGATCACAGCGTCAACGGCGCTTCCGTTTCCAACACCGGCGGTGGAGACGGAACTCCCTGGTATCTC
CTCGATCTGTCCCGGCCCATCAAGCCCATCGTCCTGCAGATCAGGAAGCGCCCCCAGTTCGTCGCGATGGACAAACCGGA
CGACGAGAATGTCTTTATGCGGAAGAAGTTCCGTTACGGTGTGGATGACCGGAAAAATGTCGGCTACGGTCTGTGGCAGC
TTGCCTACGGCAGCAAGCAGACCCTGGACGCGACAAACTATGCCGCGGCCCGGGCGGCCATGATGGCCTTCACCAACGAC
GAGGGCGTGCCGTTGGGCATTACGCCGACCCACCTGGTGGTCCCCCCGACGCTCGAATCCAACGGCCGGACCGTTGTGGA
AGCGCAGTTCGACGCCAACGGGGCAAGCAACGTATGGTACAACACCGCGAAGCTGGTGGTTGTGCCCTGGCTGGCTTAG

Upstream 100 bases:

>100_bases
CTGGATCGAATACAAGAAGAAGCTGCTGACGGCGTAACATGAACCATGAACCGGGAGAGAGCGCCGCTCTCTCCCGAAAA
CCGGAAAAGGAGTGCATGAC

Downstream 100 bases:

>100_bases
TCGACAACCAATAAACAGGCGGTGGCATGTCCCACCGCCTGAATTACAAGGAGAAGGACGATGATTCGTATCAGAAGCAA
AAGGGACGGCTTCCGCAGAT

Product: mu-like prophage major head subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MIVNQANLQGIYKSFNTIFNQAFDAAPSQWPLVAMQVPSTGRSVDYKWLGDFPMMREWLGDRVLKDLSAFKYEITNKDYE
STIEVDRNDIDDDQIGVYTPMIQGLAQAAKVHPDILVFALLKAGFDTGCFDGQYFFDSDHSVNGASVSNTGGGDGTPWYL
LDLSRPIKPIVLQIRKRPQFVAMDKPDDENVFMRKKFRYGVDDRKNVGYGLWQLAYGSKQTLDATNYAAARAAMMAFTND
EGVPLGITPTHLVVPPTLESNGRTVVEAQFDANGASNVWYNTAKLVVVPWLA

Sequences:

>Translated_292_residues
MIVNQANLQGIYKSFNTIFNQAFDAAPSQWPLVAMQVPSTGRSVDYKWLGDFPMMREWLGDRVLKDLSAFKYEITNKDYE
STIEVDRNDIDDDQIGVYTPMIQGLAQAAKVHPDILVFALLKAGFDTGCFDGQYFFDSDHSVNGASVSNTGGGDGTPWYL
LDLSRPIKPIVLQIRKRPQFVAMDKPDDENVFMRKKFRYGVDDRKNVGYGLWQLAYGSKQTLDATNYAAARAAMMAFTND
EGVPLGITPTHLVVPPTLESNGRTVVEAQFDANGASNVWYNTAKLVVVPWLA
>Mature_292_residues
MIVNQANLQGIYKSFNTIFNQAFDAAPSQWPLVAMQVPSTGRSVDYKWLGDFPMMREWLGDRVLKDLSAFKYEITNKDYE
STIEVDRNDIDDDQIGVYTPMIQGLAQAAKVHPDILVFALLKAGFDTGCFDGQYFFDSDHSVNGASVSNTGGGDGTPWYL
LDLSRPIKPIVLQIRKRPQFVAMDKPDDENVFMRKKFRYGVDDRKNVGYGLWQLAYGSKQTLDATNYAAARAAMMAFTND
EGVPLGITPTHLVVPPTLESNGRTVVEAQFDANGASNVWYNTAKLVVVPWLA

Specific function: Unknown

COG id: COG4397

COG function: function code R; Mu-like prophage major head subunit gpT

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To phage Mu protein T [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018774 [H]

Pfam domain/function: PF10124 Mu-like_gpT [H]

EC number: NA

Molecular weight: Translated: 32557; Mature: 32557

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVNQANLQGIYKSFNTIFNQAFDAAPSQWPLVAMQVPSTGRSVDYKWLGDFPMMREWLG
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEECEEECCCCHHHHHHHH
DRVLKDLSAFKYEITNKDYESTIEVDRNDIDDDQIGVYTPMIQGLAQAAKVHPDILVFAL
HHHHHHHHHHEEEECCCCCCCEEEECCCCCCCCCCEEHHHHHHHHHHHHHCCHHHHHHHH
LKAGFDTGCFDGQYFFDSDHSVNGASVSNTGGGDGTPWYLLDLSRPIKPIVLQIRKRPQF
HHCCCCCCCCCCEEEECCCCCCCCCEECCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCE
VAMDKPDDENVFMRKKFRYGVDDRKNVGYGLWQLAYGSKQTLDATNYAAARAAMMAFTND
EEECCCCCCCCEEHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHEEEEECC
EGVPLGITPTHLVVPPTLESNGRTVVEAQFDANGASNVWYNTAKLVVVPWLA
CCEEECCCCCEEEECCCCCCCCCEEEEEEECCCCCCCEEEECEEEEEEECCC
>Mature Secondary Structure
MIVNQANLQGIYKSFNTIFNQAFDAAPSQWPLVAMQVPSTGRSVDYKWLGDFPMMREWLG
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEECEEECCCCHHHHHHHH
DRVLKDLSAFKYEITNKDYESTIEVDRNDIDDDQIGVYTPMIQGLAQAAKVHPDILVFAL
HHHHHHHHHHEEEECCCCCCCEEEECCCCCCCCCCEEHHHHHHHHHHHHHCCHHHHHHHH
LKAGFDTGCFDGQYFFDSDHSVNGASVSNTGGGDGTPWYLLDLSRPIKPIVLQIRKRPQF
HHCCCCCCCCCCEEEECCCCCCCCCEECCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCE
VAMDKPDDENVFMRKKFRYGVDDRKNVGYGLWQLAYGSKQTLDATNYAAARAAMMAFTND
EEECCCCCCCCEEHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHEEEEECC
EGVPLGITPTHLVVPPTLESNGRTVVEAQFDANGASNVWYNTAKLVVVPWLA
CCEEECCCCCEEEECCCCCCCCCEEEEEEECCCCCCCEEEECEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]