Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85858392

Identifier: 85858392

GI number: 85858392

Start: 546187

End: 547248

Strand: Direct

Name: 85858392

Synonym: SYN_02300

Alternate gene names: NA

Gene position: 546187-547248 (Clockwise)

Preceding gene: 85858391

Following gene: 85858393

Centisome position: 17.18

GC content: 59.42

Gene sequence:

>1062_bases
TTGCAGTCTGAGTCAGGAGGGGTTTTGACGATGGGAGAGAAAATCCGGGTTCTTTTGAAGGAAATGACGGGAGTGCCCGG
GGAATTCCAGGTACTGCCCGCGGGCAGGATCGACATGAAAGGTTACGGGTCGGCAACCCTGGACGAAGCCGGCGCGACGG
AGATCATCGCCGAGTTCGCCAGACGCGGCCTGGATATGGTTATCGACTACGAGCACCAGACCTTGAAGGACAGCCAGGCC
CCCGCGGCGGGATGGATCAAGGCGCTGACCTGGAAGGGCTCCGATGGACTCTGGGCGGTCGTGGACTGGACGCGGCAGGC
GTCGAACTATCTGGCCAACAGGGAATACCGGTATTTTTCCCCGGTGGTGCTCATCGAGGAGGCGTCGGGACGGATTGTCG
CCATGCTTAACGTGGCCCTGACCAACATGCCCCGGATCGACAACCTGAAGCCCCTGGTGGCGAAATGGAATTTAACCGGA
GACGGGGAACCCGCCTCCCAAAACAAAGCGAAGGAGATTGTCATGATCGAAAAATTGAGGAAACTCCTCGGCCTGGCGGA
CGATGCCGGGGAAGACAAGGTTCTCGAAGCGGCGACCCTGGCCGTCAACACGGCGAAGGAGGCGGGCGGCAAGGGGGAAG
TCGTCGCCTGCAGGGAAGTCCTGGAGGCCCTGGGAGCGAAAGAGAATGCAGACAGGGAAGAGGTGATCCGGATCGTCGCT
TCCCTCAAGACCCCCGGTGACGTCGCCGTGCAGTTAAGCCACCAGGTGGCTGAGCTCACCCGGAAAATCGCCGAAATGAA
TCAACAGGATCTGATTGCCCTGTCCCTCAAGGAGGGGAAGACCTCTCCCGAAGAACTGGACAAGTGGGGGCGGGACCTGG
CCCTGAAAAATCCGGATCAGTTCAAACTCATCGTCCTGTCCCGTCCCGCGGGAAGCGTCATCCCCGTGGAAGGGCTGCGC
GTTCTGAAAGACTCCGATCCGGGGAAGATGGACGATGCCCAGAAGAGCATCAACGCGATGATGGGCATCGATGAAGACAC
GTTCAAAAAATACAACCAGTAG

Upstream 100 bases:

>100_bases
ATTTGCCCTGTAAGCGGTTATCTGTGTCAGGCGCGATCAAACCTTCGCGCGAAAAACGATCTCAAAATTTAAAGTATGTT
TAAAGCTATTTCCGGGGAAA

Downstream 100 bases:

>100_bases
CCCTGAGCGGGGGAAGGAGGAATAGCATGACTGCTTTAGCAGATGACAAGAAAACCGAATACCGGGAAGGCGTCGAGATT
TCCATTCCTGTCGATGACGG

Product: mu-like prophage Flumu I protein

Products: NA

Alternate protein names: I Protein; Prophage MuSo1 ; Protease Proteins; Bacteriophage Mu I Protein GP; Mu Bacteriophage Protein I; Mu-Like Prophage I Protein-Like; Mu-Like Prophage Flumu I Protein; Mu Phage/Prophage-Related Protein; Mu-Like Prophage FluMu I Protein

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MQSESGGVLTMGEKIRVLLKEMTGVPGEFQVLPAGRIDMKGYGSATLDEAGATEIIAEFARRGLDMVIDYEHQTLKDSQA
PAAGWIKALTWKGSDGLWAVVDWTRQASNYLANREYRYFSPVVLIEEASGRIVAMLNVALTNMPRIDNLKPLVAKWNLTG
DGEPASQNKAKEIVMIEKLRKLLGLADDAGEDKVLEAATLAVNTAKEAGGKGEVVACREVLEALGAKENADREEVIRIVA
SLKTPGDVAVQLSHQVAELTRKIAEMNQQDLIALSLKEGKTSPEELDKWGRDLALKNPDQFKLIVLSRPAGSVIPVEGLR
VLKDSDPGKMDDAQKSINAMMGIDEDTFKKYNQ

Sequences:

>Translated_353_residues
MQSESGGVLTMGEKIRVLLKEMTGVPGEFQVLPAGRIDMKGYGSATLDEAGATEIIAEFARRGLDMVIDYEHQTLKDSQA
PAAGWIKALTWKGSDGLWAVVDWTRQASNYLANREYRYFSPVVLIEEASGRIVAMLNVALTNMPRIDNLKPLVAKWNLTG
DGEPASQNKAKEIVMIEKLRKLLGLADDAGEDKVLEAATLAVNTAKEAGGKGEVVACREVLEALGAKENADREEVIRIVA
SLKTPGDVAVQLSHQVAELTRKIAEMNQQDLIALSLKEGKTSPEELDKWGRDLALKNPDQFKLIVLSRPAGSVIPVEGLR
VLKDSDPGKMDDAQKSINAMMGIDEDTFKKYNQ
>Mature_353_residues
MQSESGGVLTMGEKIRVLLKEMTGVPGEFQVLPAGRIDMKGYGSATLDEAGATEIIAEFARRGLDMVIDYEHQTLKDSQA
PAAGWIKALTWKGSDGLWAVVDWTRQASNYLANREYRYFSPVVLIEEASGRIVAMLNVALTNMPRIDNLKPLVAKWNLTG
DGEPASQNKAKEIVMIEKLRKLLGLADDAGEDKVLEAATLAVNTAKEAGGKGEVVACREVLEALGAKENADREEVIRIVA
SLKTPGDVAVQLSHQVAELTRKIAEMNQQDLIALSLKEGKTSPEELDKWGRDLALKNPDQFKLIVLSRPAGSVIPVEGLR
VLKDSDPGKMDDAQKSINAMMGIDEDTFKKYNQ

Specific function: Unknown

COG id: COG4388

COG function: function code R; Mu-like prophage I protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38531; Mature: 38531

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSESGGVLTMGEKIRVLLKEMTGVPGEFQVLPAGRIDMKGYGSATLDEAGATEIIAEFA
CCCCCCCEEEECHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH
RRGLDMVIDYEHQTLKDSQAPAAGWIKALTWKGSDGLWAVVDWTRQASNYLANREYRYFS
HCCCCEEEECCHHHHCCCCCCHHHHEEEEEEECCCCCEEEEEHHHHHHHHHHCCCCEEEC
PVVLIEEASGRIVAMLNVALTNMPRIDNLKPLVAKWNLTGDGEPASQNKAKEIVMIEKLR
CEEEEECCCCCEEEEEEHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH
KLLGLADDAGEDKVLEAATLAVNTAKEAGGKGEVVACREVLEALGAKENADREEVIRIVA
HHHCCCCCCCCCHHHHHHHHHEECHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHH
SLKTPGDVAVQLSHQVAELTRKIAEMNQQDLIALSLKEGKTSPEELDKWGRDLALKNPDQ
HCCCCCHHEEEHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCC
FKLIVLSRPAGSVIPVEGLRVLKDSDPGKMDDAQKSINAMMGIDEDTFKKYNQ
EEEEEEECCCCCEECCCCEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHCCC
>Mature Secondary Structure
MQSESGGVLTMGEKIRVLLKEMTGVPGEFQVLPAGRIDMKGYGSATLDEAGATEIIAEFA
CCCCCCCEEEECHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH
RRGLDMVIDYEHQTLKDSQAPAAGWIKALTWKGSDGLWAVVDWTRQASNYLANREYRYFS
HCCCCEEEECCHHHHCCCCCCHHHHEEEEEEECCCCCEEEEEHHHHHHHHHHCCCCEEEC
PVVLIEEASGRIVAMLNVALTNMPRIDNLKPLVAKWNLTGDGEPASQNKAKEIVMIEKLR
CEEEEECCCCCEEEEEEHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH
KLLGLADDAGEDKVLEAATLAVNTAKEAGGKGEVVACREVLEALGAKENADREEVIRIVA
HHHCCCCCCCCCHHHHHHHHHEECHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHH
SLKTPGDVAVQLSHQVAELTRKIAEMNQQDLIALSLKEGKTSPEELDKWGRDLALKNPDQ
HCCCCCHHEEEHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCC
FKLIVLSRPAGSVIPVEGLRVLKDSDPGKMDDAQKSINAMMGIDEDTFKKYNQ
EEEEEEECCCCCEECCCCEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA