| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is kbl [C]
Identifier: 85858049
GI number: 85858049
Start: 210188
End: 211351
Strand: Direct
Name: kbl [C]
Synonym: SYN_02568
Alternate gene names: 85858049
Gene position: 210188-211351 (Clockwise)
Preceding gene: 85858048
Following gene: 85858050
Centisome position: 6.61
GC content: 56.36
Gene sequence:
>1164_bases ATGGGCGGATTTACGAAACGGTTGAAAACACAATTGAAGCTCCACCGGCAGGCCGGTCTCTACCGGCAGCCGCCGGAAAT CCTCGGCCGGGAGGGTGCTTCCCTTCACCTGGCCGAGGGCCGGGTCCTCAATTTCGCCTCCAACGACTATCTGGGACTAG GGGCGTCGGAGGTCCTGCGGAAACAGGTTGCCCGCAACTTTTGTAAATACGGTTCTTCTTCCTCTTCATCCCGCCTCGTC TCCGGCCATTATGCCCTGATTGCCGAAGCTGAAAGGGCATACGCCCGCTATTTCGGCTATGAGGAGGCTCTCTTCTTTCC CAGCGGCTATCAGGCCAACCTTGCCCTGCTGTCCACTCTCTTCGATTCCGGAACGACGCTCTTTTTTGACAAGCATATCC ATGCCAGCAGCGTCAAGGGTATGGCCCTCAGTTCCGCAGAACTTGTGGGCTACAATCACAGTTCCCTGACCCACCTTGAA AAACGCCTGAAAAAAGCGGAAACAAGGGAGACCGTCGTCCTGACGGAATCCCTTTTCAGCATGGACGGCGACCTGCTGAA TGTCTCCGGCCTGGCCGATCTCAAGGAGCATTACGGGTTTCTCTGCATTGTCGATGAAGCCCACGCCCTGGGCGTTCTGG GGGAGAGGGGAATCGGCGTTGCCCTGCCGGTTGCCGACATCGCCGTGGGGACCTTTGGAAAGGCCTTGGGACTCTTCGGA GCATTTCTTCTTATTCCGGCCCTGGTCAAGGAGTATCTCTTCAACTTCGCTTCCCCCCTCATCTACTCCACCACCCTTCC CGAGGCGCACGCAGCCTCGGCCATCGACATCCTGACCCTGTTGGGCGATAGCGACGAGTCCAGAAGGCATCTCCGGGAAA TCAGCTCCCTCATGAAAAACCGTCTGTATGCAGAGGGTTTTTCCGTGCAGGGGGACGCCCATATCCTGGCTGTGGAAATC GGGCGGGAACAGAAGGCGCTGGAGATTTCAAACCGGCTTCGGAAAAAGGGAATATTCGTTTTGTCGGCACGCTATCCCAC CGTTCCCCTGGGAAGAGCCATCCTGAGGATTGGAATGACGGCCCTGCACGGGGAGGAGGACGTCAATCACTTTATTTTGT CCCTGAAGGAGGTTATGAAAGAATATGAAAACGGAAATTCCTGA
Upstream 100 bases:
>100_bases AGAGCGGCAAAGCGGTTATCGAAGGGGAATTCGTCTTTGCGGCGGTTGCCTACGATTCAAACCTGCGGGAAGAAATCCTC AAAAAACATTACGAGAAAAA
Downstream 100 bases:
>100_bases CATCTATGTGATAGGCACGGATACAGGGGTCGGAAAGACCGTCCTGTCGTTCCTGTTGATGCGCTACTTCTTCGATCGGG GGGCTGTCCCCTTTTATTTC
Product: 8-amino-7-oxononanoate synthase
Products: NA
Alternate protein names: AONS/AKB ligase; 7-keto-8-amino-pelargonic acid synthase; 7-KAP synthase; KAPA synthase; 8-amino-7-ketopelargonate synthase; Alpha-oxoamine synthase; L-alanine--pimeloyl-CoA ligase [H]
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MGGFTKRLKTQLKLHRQAGLYRQPPEILGREGASLHLAEGRVLNFASNDYLGLGASEVLRKQVARNFCKYGSSSSSSRLV SGHYALIAEAERAYARYFGYEEALFFPSGYQANLALLSTLFDSGTTLFFDKHIHASSVKGMALSSAELVGYNHSSLTHLE KRLKKAETRETVVLTESLFSMDGDLLNVSGLADLKEHYGFLCIVDEAHALGVLGERGIGVALPVADIAVGTFGKALGLFG AFLLIPALVKEYLFNFASPLIYSTTLPEAHAASAIDILTLLGDSDESRRHLREISSLMKNRLYAEGFSVQGDAHILAVEI GREQKALEISNRLRKKGIFVLSARYPTVPLGRAILRIGMTALHGEEDVNHFILSLKEVMKEYENGNS
Sequences:
>Translated_387_residues MGGFTKRLKTQLKLHRQAGLYRQPPEILGREGASLHLAEGRVLNFASNDYLGLGASEVLRKQVARNFCKYGSSSSSSRLV SGHYALIAEAERAYARYFGYEEALFFPSGYQANLALLSTLFDSGTTLFFDKHIHASSVKGMALSSAELVGYNHSSLTHLE KRLKKAETRETVVLTESLFSMDGDLLNVSGLADLKEHYGFLCIVDEAHALGVLGERGIGVALPVADIAVGTFGKALGLFG AFLLIPALVKEYLFNFASPLIYSTTLPEAHAASAIDILTLLGDSDESRRHLREISSLMKNRLYAEGFSVQGDAHILAVEI GREQKALEISNRLRKKGIFVLSARYPTVPLGRAILRIGMTALHGEEDVNHFILSLKEVMKEYENGNS >Mature_386_residues GGFTKRLKTQLKLHRQAGLYRQPPEILGREGASLHLAEGRVLNFASNDYLGLGASEVLRKQVARNFCKYGSSSSSSRLVS GHYALIAEAERAYARYFGYEEALFFPSGYQANLALLSTLFDSGTTLFFDKHIHASSVKGMALSSAELVGYNHSSLTHLEK RLKKAETRETVVLTESLFSMDGDLLNVSGLADLKEHYGFLCIVDEAHALGVLGERGIGVALPVADIAVGTFGKALGLFGA FLLIPALVKEYLFNFASPLIYSTTLPEAHAASAIDILTLLGDSDESRRHLREISSLMKNRLYAEGFSVQGDAHILAVEIG REQKALEISNRLRKKGIFVLSARYPTVPLGRAILRIGMTALHGEEDVNHFILSLKEVMKEYENGNS
Specific function: Catalyzes the decarboxylative condensation of pimeloyl- CoA and L-alanine to produce 8-amino-7-oxononanoate (AON), coenzyme A and/or converts 2-amino-3-ketobutyrate to glycine and acetyl-CoA [H]
COG id: COG0156
COG function: function code H; 7-keto-8-aminopelargonate synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI7657118, Length=381, Percent_Identity=31.758530183727, Blast_Score=180, Evalue=3e-45, Organism=Homo sapiens, GI284448556, Length=345, Percent_Identity=32.463768115942, Blast_Score=172, Evalue=4e-43, Organism=Homo sapiens, GI4502025, Length=358, Percent_Identity=28.2122905027933, Blast_Score=146, Evalue=3e-35, Organism=Homo sapiens, GI40316939, Length=358, Percent_Identity=28.2122905027933, Blast_Score=146, Evalue=3e-35, Organism=Homo sapiens, GI83977442, Length=352, Percent_Identity=29.2613636363636, Blast_Score=143, Evalue=2e-34, Organism=Homo sapiens, GI83977440, Length=352, Percent_Identity=29.2613636363636, Blast_Score=143, Evalue=2e-34, Organism=Homo sapiens, GI83977444, Length=352, Percent_Identity=29.2613636363636, Blast_Score=143, Evalue=3e-34, Organism=Homo sapiens, GI4758668, Length=362, Percent_Identity=25.414364640884, Blast_Score=111, Evalue=9e-25, Organism=Homo sapiens, GI119220554, Length=362, Percent_Identity=25.414364640884, Blast_Score=108, Evalue=9e-24, Organism=Homo sapiens, GI5454084, Length=370, Percent_Identity=22.7027027027027, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1790046, Length=391, Percent_Identity=30.9462915601023, Blast_Score=182, Evalue=3e-47, Organism=Escherichia coli, GI1786993, Length=341, Percent_Identity=33.1378299120235, Blast_Score=165, Evalue=5e-42, Organism=Caenorhabditis elegans, GI71994529, Length=388, Percent_Identity=29.1237113402062, Blast_Score=167, Evalue=7e-42, Organism=Caenorhabditis elegans, GI32566772, Length=369, Percent_Identity=26.8292682926829, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI17560912, Length=366, Percent_Identity=25.6830601092896, Blast_Score=101, Evalue=6e-22, Organism=Caenorhabditis elegans, GI17560914, Length=366, Percent_Identity=25.6830601092896, Blast_Score=101, Evalue=8e-22, Organism=Caenorhabditis elegans, GI71982617, Length=295, Percent_Identity=21.6949152542373, Blast_Score=80, Evalue=3e-15, Organism=Caenorhabditis elegans, GI71982625, Length=295, Percent_Identity=21.6949152542373, Blast_Score=80, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6320438, Length=381, Percent_Identity=27.5590551181102, Blast_Score=122, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6320267, Length=362, Percent_Identity=27.0718232044199, Blast_Score=122, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6323954, Length=272, Percent_Identity=24.6323529411765, Blast_Score=88, Evalue=3e-18, Organism=Drosophila melanogaster, GI24662918, Length=380, Percent_Identity=28.4210526315789, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI17137420, Length=355, Percent_Identity=31.2676056338028, Blast_Score=149, Evalue=5e-36, Organism=Drosophila melanogaster, GI17136286, Length=372, Percent_Identity=25.2688172043011, Blast_Score=108, Evalue=6e-24, Organism=Drosophila melanogaster, GI24653280, Length=348, Percent_Identity=21.8390804597701, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24653276, Length=348, Percent_Identity=21.8390804597701, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24653278, Length=348, Percent_Identity=21.8390804597701, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR004723 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.3.1.29; =2.3.1.47 [H]
Molecular weight: Translated: 42399; Mature: 42268
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGFTKRLKTQLKLHRQAGLYRQPPEILGREGASLHLAEGRVLNFASNDYLGLGASEVLR CCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCEEEEECCCEEEECCCCCCCCCHHHHHH KQVARNFCKYGSSSSSSRLVSGHYALIAEAERAYARYFGYEEALFFPSGYQANLALLSTL HHHHHHHHHCCCCCCCCCEEECCCCEEHHHHHHHHHHCCCHHEEECCCCCCHHHHHHHHH FDSGTTLFFDKHIHASSVKGMALSSAELVGYNHSSLTHLEKRLKKAETRETVVLTESLFS HCCCCEEEEECCCCHHCCCCCEECCHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHH MDGDLLNVSGLADLKEHYGFLCIVDEAHALGVLGERGIGVALPVADIAVGTFGKALGLFG CCCCEEECCCHHHHHHCCCEEEEEECCCHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHH AFLLIPALVKEYLFNFASPLIYSTTLPEAHAASAIDILTLLGDSDESRRHLREISSLMKN HHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH RLYAEGFSVQGDAHILAVEIGREQKALEISNRLRKKGIFVLSARYPTVPLGRAILRIGMT HHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHH ALHGEEDVNHFILSLKEVMKEYENGNS HHCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GGFTKRLKTQLKLHRQAGLYRQPPEILGREGASLHLAEGRVLNFASNDYLGLGASEVLR CCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCEEEEECCCEEEECCCCCCCCCHHHHHH KQVARNFCKYGSSSSSSRLVSGHYALIAEAERAYARYFGYEEALFFPSGYQANLALLSTL HHHHHHHHHCCCCCCCCCEEECCCCEEHHHHHHHHHHCCCHHEEECCCCCCHHHHHHHHH FDSGTTLFFDKHIHASSVKGMALSSAELVGYNHSSLTHLEKRLKKAETRETVVLTESLFS HCCCCEEEEECCCCHHCCCCCEECCHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHH MDGDLLNVSGLADLKEHYGFLCIVDEAHALGVLGERGIGVALPVADIAVGTFGKALGLFG CCCCEEECCCHHHHHHCCCEEEEEECCCHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHH AFLLIPALVKEYLFNFASPLIYSTTLPEAHAASAIDILTLLGDSDESRRHLREISSLMKN HHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH RLYAEGFSVQGDAHILAVEIGREQKALEISNRLRKKGIFVLSARYPTVPLGRAILRIGMT HHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHH ALHGEEDVNHFILSLKEVMKEYENGNS HHCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA