| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85858048
Identifier: 85858048
GI number: 85858048
Start: 209745
End: 210212
Strand: Direct
Name: 85858048
Synonym: SYN_02567
Alternate gene names: NA
Gene position: 209745-210212 (Clockwise)
Preceding gene: 85858047
Following gene: 85858049
Centisome position: 6.6
GC content: 54.91
Gene sequence:
>468_bases GTGGAAGGAGAGTCGAGTTTGCTGAAATCGATCCCCGGAATGACCATTGCCACAGGTCTGAGCGGATTTTCGCTTCTTGC CCGCATTACGGAAAGCACCAAAGAGCGGGTCGCTGCCCTGGCCGATCTCGCTGACGCTCCGCAATTTATCGGGTTGGAAG CGCTGGCTCAGGCGGGGGCTTATCACGTCCGTTTCCTGTGCGAATTCGAAAGGCAGGCCGTCCTCCTCATGATCCGGAAC GGTCGTTTGCCTGAGGAGGAAATGCTGAACGGCCGCTATGAAATTTCAGGGACTCTGCGCAGCAGGAGCGCCTCCGTTTT CGCCTATGAGATGTCGGCGGTGAAGAGCGGCAAAGCGGTTATCGAAGGGGAATTCGTCTTTGCGGCGGTTGCCTACGATT CAAACCTGCGGGAAGAAATCCTCAAAAAACATTACGAGAAAAAATGGGCGGATTTACGAAACGGTTGA
Upstream 100 bases:
>100_bases AAAGACGAAAACGAATGCTTCTATCCGATGCAGGCCTGTTTCGCTTCCCCTTCGCGGCCTTGAACATGTCCGTGATCTGG AATCGGAATAAAATAAAGAT
Downstream 100 bases:
>100_bases AAACACAATTGAAGCTCCACCGGCAGGCCGGTCTCTACCGGCAGCCGCCGGAAATCCTCGGCCGGGAGGGTGCTTCCCTT CACCTGGCCGAGGGCCGGGT
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MEGESSLLKSIPGMTIATGLSGFSLLARITESTKERVAALADLADAPQFIGLEALAQAGAYHVRFLCEFERQAVLLMIRN GRLPEEEMLNGRYEISGTLRSRSASVFAYEMSAVKSGKAVIEGEFVFAAVAYDSNLREEILKKHYEKKWADLRNG
Sequences:
>Translated_155_residues MEGESSLLKSIPGMTIATGLSGFSLLARITESTKERVAALADLADAPQFIGLEALAQAGAYHVRFLCEFERQAVLLMIRN GRLPEEEMLNGRYEISGTLRSRSASVFAYEMSAVKSGKAVIEGEFVFAAVAYDSNLREEILKKHYEKKWADLRNG >Mature_155_residues MEGESSLLKSIPGMTIATGLSGFSLLARITESTKERVAALADLADAPQFIGLEALAQAGAYHVRFLCEFERQAVLLMIRN GRLPEEEMLNGRYEISGTLRSRSASVFAYEMSAVKSGKAVIEGEFVFAAVAYDSNLREEILKKHYEKKWADLRNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17094; Mature: 17094
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGESSLLKSIPGMTIATGLSGFSLLARITESTKERVAALADLADAPQFIGLEALAQAGA CCCHHHHHHHCCCCEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC YHVRFLCEFERQAVLLMIRNGRLPEEEMLNGRYEISGTLRSRSASVFAYEMSAVKSGKAV HHHHHEEHHCCCEEEEEEECCCCCHHHHHCCEEEEEEEHHCCCCHHHHHHHHHHHCCCEE IEGEFVFAAVAYDSNLREEILKKHYEKKWADLRNG EECCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEGESSLLKSIPGMTIATGLSGFSLLARITESTKERVAALADLADAPQFIGLEALAQAGA CCCHHHHHHHCCCCEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC YHVRFLCEFERQAVLLMIRNGRLPEEEMLNGRYEISGTLRSRSASVFAYEMSAVKSGKAV HHHHHEEHHCCCEEEEEEECCCCCHHHHHCCEEEEEEEHHCCCCHHHHHHHHHHHCCCEE IEGEFVFAAVAYDSNLREEILKKHYEKKWADLRNG EECCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA