| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85857852
Identifier: 85857852
GI number: 85857852
Start: 10078
End: 10836
Strand: Direct
Name: 85857852
Synonym: SYN_02045
Alternate gene names: NA
Gene position: 10078-10836 (Clockwise)
Preceding gene: 85857851
Following gene: 85857853
Centisome position: 0.32
GC content: 46.77
Gene sequence:
>759_bases ATGATGAAATGGGCATTCCAAATCGAGCGGACAACATTAGACCAGAGAAACTTATTAGACTTGCTTGATAGGATAGGATA TCAACAAGCGGATGTTCCAGGGCTTGATTTAGTTTTTTGCTCGAAGACACTGGAAGCTTGTGTGACCGCTGGCGAGGTCT GGGAAGAGGCAAAAAGGATTCGAGATTTGATATCAGAGGTCACAGAAATTGATCCTGAATTTACCCTTGGGCCAGTAATC GATTTGTCCTCAGGAGAGCCAAAACGGCACCACTTTCTGGAGGTAAAATCTGGCATCATCGTTACAACAGGGGTTGATGC GATTTTGACCGTGTCTCCTCCGGACAATCTCTCTGCAGAACAGCTTATCGAGTACAATAGACGCCGTACTGAACAGGAAT ATAAGGCTAAGTTGGAAGTGCAGCTATCGAAGCTGGAACCCGCATTTCGTGAGCCTCGCGCAGTCAAAGTGCAACAGCTA CTCAAGCGAGATTCACACAACGGTGAATCGTTGTACAAGATCTACGAGTTATTAGAGGGGCATCCATCCCACCGCAAGGA GTTCCATGAACGATTTGGGATTTCCAAAGTTGAGTTCCAACGATTTTCCGATGCTGTCCACAATCCAGTTGTCTCGGGTG AGTTGGCACGTCACGCCTATGAGGACAAACCGAAAACCGATAATCCTATGACTTTCGCAGAGGCGAAATCTTTTGTTTTG GGCATTGCCAAGCATTGGCTAGCTTCTCTTCGGACCTAA
Upstream 100 bases:
>100_bases GTCTCGTTTCCTGAAGATTCAAGGTCAAAGTGGAGATATCCAGAAACTTTAGAATAACTTGTTGTGCGGCAACAAGCTCA TGGCAGAGTGACGAGGGTAG
Downstream 100 bases:
>100_bases ACGGACATCCTCGCAGGAGATGGCGTGACTGACATAAAGAGGATATCGCACAACAAGTGCATGCACGCGGACACCGAACC ACGCGGCGCACATTCGGTGG
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MMKWAFQIERTTLDQRNLLDLLDRIGYQQADVPGLDLVFCSKTLEACVTAGEVWEEAKRIRDLISEVTEIDPEFTLGPVI DLSSGEPKRHHFLEVKSGIIVTTGVDAILTVSPPDNLSAEQLIEYNRRRTEQEYKAKLEVQLSKLEPAFREPRAVKVQQL LKRDSHNGESLYKIYELLEGHPSHRKEFHERFGISKVEFQRFSDAVHNPVVSGELARHAYEDKPKTDNPMTFAEAKSFVL GIAKHWLASLRT
Sequences:
>Translated_252_residues MMKWAFQIERTTLDQRNLLDLLDRIGYQQADVPGLDLVFCSKTLEACVTAGEVWEEAKRIRDLISEVTEIDPEFTLGPVI DLSSGEPKRHHFLEVKSGIIVTTGVDAILTVSPPDNLSAEQLIEYNRRRTEQEYKAKLEVQLSKLEPAFREPRAVKVQQL LKRDSHNGESLYKIYELLEGHPSHRKEFHERFGISKVEFQRFSDAVHNPVVSGELARHAYEDKPKTDNPMTFAEAKSFVL GIAKHWLASLRT >Mature_252_residues MMKWAFQIERTTLDQRNLLDLLDRIGYQQADVPGLDLVFCSKTLEACVTAGEVWEEAKRIRDLISEVTEIDPEFTLGPVI DLSSGEPKRHHFLEVKSGIIVTTGVDAILTVSPPDNLSAEQLIEYNRRRTEQEYKAKLEVQLSKLEPAFREPRAVKVQQL LKRDSHNGESLYKIYELLEGHPSHRKEFHERFGISKVEFQRFSDAVHNPVVSGELARHAYEDKPKTDNPMTFAEAKSFVL GIAKHWLASLRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28854; Mature: 28854
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKWAFQIERTTLDQRNLLDLLDRIGYQQADVPGLDLVFCSKTLEACVTAGEVWEEAKRI CCCHHEEHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RDLISEVTEIDPEFTLGPVIDLSSGEPKRHHFLEVKSGIIVTTGVDAILTVSPPDNLSAE HHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHCCCEEEEECCCEEEEECCCCCCCHH QLIEYNRRRTEQEYKAKLEVQLSKLEPAFREPRAVKVQQLLKRDSHNGESLYKIYELLEG HHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCC HPSHRKEFHERFGISKVEFQRFSDAVHNPVVSGELARHAYEDKPKTDNPMTFAEAKSFVL CCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH GIAKHWLASLRT HHHHHHHHHHCC >Mature Secondary Structure MMKWAFQIERTTLDQRNLLDLLDRIGYQQADVPGLDLVFCSKTLEACVTAGEVWEEAKRI CCCHHEEHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RDLISEVTEIDPEFTLGPVIDLSSGEPKRHHFLEVKSGIIVTTGVDAILTVSPPDNLSAE HHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHCCCEEEEECCCEEEEECCCCCCCHH QLIEYNRRRTEQEYKAKLEVQLSKLEPAFREPRAVKVQQLLKRDSHNGESLYKIYELLEG HHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCC HPSHRKEFHERFGISKVEFQRFSDAVHNPVVSGELARHAYEDKPKTDNPMTFAEAKSFVL CCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH GIAKHWLASLRT HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA