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The map label for this gene is 85857850

Identifier: 85857850

GI number: 85857850

Start: 7851

End: 8270

Strand: Direct

Name: 85857850

Synonym: SYN_02047

Alternate gene names: NA

Gene position: 7851-8270 (Clockwise)

Preceding gene: 85857849

Following gene: 85857851

Centisome position: 0.25

GC content: 55.24

Gene sequence:

>420_bases
GTGAACGAGTTCTGGCGTCTTCTGGATCATACGGCGGATCTCGGCATTGAGGTGGAAGGCCCTTCTCTGGAAGAGCTTTT
TGCCCATGCGGGGGAGGCCATTTTTGAACTGATGGTGGAACTGGACACGGTGGAGACCGCGGTGAGCCGCCATCTGGTTA
TTGAGGGCGCCGATCTTGCCGATCTCTGGGTCAATTATCTCCGGGAAGTGCTCTATCTCTGGGGCGGGGAGAGCCTGCTC
ATGAAAAAGGTCCAAATCATTAACCTGACTGAAACCTCGCTGGAGGCAACCCTGTACGGTGAACCCTACAATTCCCGCAA
ACATGAGCTGATGATGGAAATCAAGGCGGTGACCTACCACCAGGCGGAAGTCGTCCGTACCCCGGAAGGGTGGAAAGGAC
GGGTGATCTTCGATGTCTAA

Upstream 100 bases:

>100_bases
GAATGACCAGTGCGGAGCGGGAGGTCCGTGAAGAAGAGGATAATATTCCGGAAGACGATCCGCAGACGGATACGTCCCTG
TCCGGAGAGGATGAATAACC

Downstream 100 bases:

>100_bases
AATCAGTGTGACGCTGAACAAGCTGGATCTCTGCCGCTGGATGATCCCGAAAACCGGGGGAATGCGGGTTCCCGGCATCA
TTTACACCAGCGAGGAGATG

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MNEFWRLLDHTADLGIEVEGPSLEELFAHAGEAIFELMVELDTVETAVSRHLVIEGADLADLWVNYLREVLYLWGGESLL
MKKVQIINLTETSLEATLYGEPYNSRKHELMMEIKAVTYHQAEVVRTPEGWKGRVIFDV

Sequences:

>Translated_139_residues
MNEFWRLLDHTADLGIEVEGPSLEELFAHAGEAIFELMVELDTVETAVSRHLVIEGADLADLWVNYLREVLYLWGGESLL
MKKVQIINLTETSLEATLYGEPYNSRKHELMMEIKAVTYHQAEVVRTPEGWKGRVIFDV
>Mature_139_residues
MNEFWRLLDHTADLGIEVEGPSLEELFAHAGEAIFELMVELDTVETAVSRHLVIEGADLADLWVNYLREVLYLWGGESLL
MKKVQIINLTETSLEATLYGEPYNSRKHELMMEIKAVTYHQAEVVRTPEGWKGRVIFDV

Specific function: Unknown

COG id: COG1371

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0211 (archease) family [H]

Homologues:

Organism=Homo sapiens, GI30425510, Length=127, Percent_Identity=29.9212598425197, Blast_Score=63, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24648776, Length=140, Percent_Identity=35, Blast_Score=78, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002804
- InterPro:   IPR022952 [H]

Pfam domain/function: PF01951 DUF101 [H]

EC number: NA

Molecular weight: Translated: 15934; Mature: 15934

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEFWRLLDHTADLGIEVEGPSLEELFAHAGEAIFELMVELDTVETAVSRHLVIEGADLA
CCHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHH
DLWVNYLREVLYLWGGESLLMKKVQIINLTETSLEATLYGEPYNSRKHELMMEIKAVTYH
HHHHHHHHHHHHHHCCCHHHHHHHHEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHEH
QAEVVRTPEGWKGRVIFDV
HHHEEECCCCCCCCEEEEC
>Mature Secondary Structure
MNEFWRLLDHTADLGIEVEGPSLEELFAHAGEAIFELMVELDTVETAVSRHLVIEGADLA
CCHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHH
DLWVNYLREVLYLWGGESLLMKKVQIINLTETSLEATLYGEPYNSRKHELMMEIKAVTYH
HHHHHHHHHHHHHHCCCHHHHHHHHEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHEH
QAEVVRTPEGWKGRVIFDV
HHHEEECCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]