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The map label for this gene is slyA [C]

Identifier: 85375809

GI number: 85375809

Start: 3004138

End: 3004704

Strand: Reverse

Name: slyA [C]

Synonym: ELI_14910

Alternate gene names: 85375809

Gene position: 3004704-3004138 (Counterclockwise)

Preceding gene: 85375812

Following gene: 85375808

Centisome position: 98.44

GC content: 53.97

Gene sequence:

>567_bases
ATGGCGGCACTGCTAGCGAATATGGTTGACGCTGAGCTTGAACACGCCAGGCATGCGCGAGCCTTCCAAGATAGCGCTAT
GGATAAGCATATGCCGAAAGATGAGATACGTGATTACGCCCCCAACGAAAAGGATGACATCCTTTATTTGCTAGAAGAGG
TGAACAGGACCGCTCGGCGGACCTTCGACGCTCTGATCGTGGGGCTCGACCTCAATCAAACACAATGGCGGATCATCGCG
TCCTTGTTGCGAGAACCTACGCTAACACAGACCGAGATTTCTCGCCTGCTCGAGCTTGAATCGGCGACGATAGGACAGGC
TGTCGCAGTTTTGGTTGAAAAAGGTTTGATCGAGCGAGAGCGGGCGGCGCACGATCGAAGGGTTTGGAACCTCCACCTCA
CCGAGCAAGTAAGAACCATCTGGCCGGAACTGCGCGAAGCGGCTGATCGACTCCACGAAATTCTCTGGAAGGGAATGTCT
GCGCCTCAAATCGACCTCCTGCGTACGATGCTTCGAAAAGTTGCGGAGAATCAGAAGCAGGCTGACACTTGCGAAGAAAG
CCGATGA

Upstream 100 bases:

>100_bases
CCGGAGCCCCCGCACTCACCCAGCGCCGTTCGGTTCCTTATCAGCTTGAGCGACCATCGGATTCAGTTTCTGCTGTAGCG
TGAAATCAGCGAGTGTTTGC

Downstream 100 bases:

>100_bases
AGCATGATCTGGAAAACAGTGTCGGTGAACTGACGCGGCTAGCAGAACTCGGTCAGATTTTCGCCCGGCACGGTCTGAAA
AATCTCGGAAGCTTGCTTGG

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; MarR Family Regulatory Protein; Transcriptional Regulator MarR Family

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MAALLANMVDAELEHARHARAFQDSAMDKHMPKDEIRDYAPNEKDDILYLLEEVNRTARRTFDALIVGLDLNQTQWRIIA
SLLREPTLTQTEISRLLELESATIGQAVAVLVEKGLIERERAAHDRRVWNLHLTEQVRTIWPELREAADRLHEILWKGMS
APQIDLLRTMLRKVAENQKQADTCEESR

Sequences:

>Translated_188_residues
MAALLANMVDAELEHARHARAFQDSAMDKHMPKDEIRDYAPNEKDDILYLLEEVNRTARRTFDALIVGLDLNQTQWRIIA
SLLREPTLTQTEISRLLELESATIGQAVAVLVEKGLIERERAAHDRRVWNLHLTEQVRTIWPELREAADRLHEILWKGMS
APQIDLLRTMLRKVAENQKQADTCEESR
>Mature_187_residues
AALLANMVDAELEHARHARAFQDSAMDKHMPKDEIRDYAPNEKDDILYLLEEVNRTARRTFDALIVGLDLNQTQWRIIAS
LLREPTLTQTEISRLLELESATIGQAVAVLVEKGLIERERAAHDRRVWNLHLTEQVRTIWPELREAADRLHEILWKGMSA
PQIDLLRTMLRKVAENQKQADTCEESR

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21756; Mature: 21625

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAALLANMVDAELEHARHARAFQDSAMDKHMPKDEIRDYAPNEKDDILYLLEEVNRTARR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHH
TFDALIVGLDLNQTQWRIIASLLREPTLTQTEISRLLELESATIGQAVAVLVEKGLIERE
HHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAAHDRRVWNLHLTEQVRTIWPELREAADRLHEILWKGMSAPQIDLLRTMLRKVAENQKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
ADTCEESR
HHHHCCCC
>Mature Secondary Structure 
AALLANMVDAELEHARHARAFQDSAMDKHMPKDEIRDYAPNEKDDILYLLEEVNRTARR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHH
TFDALIVGLDLNQTQWRIIASLLREPTLTQTEISRLLELESATIGQAVAVLVEKGLIERE
HHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAAHDRRVWNLHLTEQVRTIWPELREAADRLHEILWKGMSAPQIDLLRTMLRKVAENQKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
ADTCEESR
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA