| Definition | Erythrobacter litoralis HTCC2594 chromosome, complete genome. |
|---|---|
| Accession | NC_007722 |
| Length | 3,052,398 |
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The map label for this gene is fyuA [H]
Identifier: 85375812
GI number: 85375812
Start: 3007429
End: 3010113
Strand: Reverse
Name: fyuA [H]
Synonym: ELI_14925
Alternate gene names: 85375812
Gene position: 3010113-3007429 (Counterclockwise)
Preceding gene: 85375813
Following gene: 85375809
Centisome position: 98.61
GC content: 56.91
Gene sequence:
>2685_bases GTGGCACTGGCCTTCACGCCGACCGCCGTCTTCGCCCAGGATATTGGCGAACCTGATGCGGATCTGGTTGAAGGTGCCGA TGTCGAAGACCAGAACGTAATCATCGTTACCGCGCAAGGGCGATCGCAGGTCCTGGCGGATGTTCCGGTTGCCGTGTCGG CTGTTTCCGGAGAAACCCTCCAGAATTCGGGCGCCAGCGACATTCGTGAACTGAACCAGGTTGCACCGTCCCTCCTTGTA TCTTCCACCGGCAACGAAGCTAACGGTTCCGCGCGTATTCGCGGTATCGGCACGGTCGGCGACAACCCTGGTCTGGAAAG TTCGGTCGCGGTTTTCGTCGATGGAGTCTATCGCTCTCGTTCGGGAAGCGCCCTGAGTGAGCTCGGCCCTATCGACAGGG TCGAGATACTTCGCGGTCCCCAAGGTACTTTGGGCGGGCGGAACTCATCAGCAGGCCTGATCAATATCTATACCGCACCG CCCGAGTTCGATTTCAGCGCGTATGGGGCCTTCACTTATGGCAACTATGATGCGATCCGCGTCGAAGGCGGCATAAACGC TCCGCTTGGCGACAGAGTAGCTGCGCGCGTGGACGGCGTGTATTTCGAGCGCGACGGCTTCTACAACGATGTTACCAACG GCGGGACGATCAACAATCGCGATCGTTATCTGGTCCGCGGTCAGCTCCTGTTCGAACCCAACGACGACCTGTCCATTCGC CTTGTCGGGGATTATTCCAAAAAGGACGAAGCGTGCTGCGCTGCGACGTTCGTCCAACCTGAGTTTGCGCCGCTTGCACG GGTCAGCGCCGGGCTTGATCCGTTTACGCGGCCATCGGGCGGGCCTGCGCTGACGAGTACCGACAATCCGATCATTCCGA TCTTGCTTGCGCTTGGGCAGGATTCGCGTGCCCTCACCCAGGACACATTCAACCGCGATCTGTATCCTACTCCGGGCAGG AGCTACGAAGGGGAAACAGAAGACTACGGTATTTCCGGGGAATTGAATTGGGACTTCGGGAACGTAACTTTGACGTCCAT CACCGGTTATCGTGAATATGCCAACAGTCAGGGATCGGACACCGATTACACCACGGTCGACATTCTCTACCGTGCTCCGA CCGAGGATGCGCTTGCTCGAGAATTCGAAACATTCACTCAGGAACTGCGCCTGAGTGGCGAGGCCTTCAACGGGAAACTC GATTGGTTGATTGGCGCGTATTACGCCAATGAAAAACTGCAGGTGCGTGACAATCTGCGGTTCGGCACCCAGTACGGCAA TTTCGTAGCGTGCCGCATCGCTATCGCGATCAACCCGGCTTTGGTCAATCCGGGGGCATCGAACTGCCTCGGTGCCAATG TGGCTGCACTGGACGGCACGCTGACAGGAACCCCGGCATTCGGCGCTGCAACCCCAGCGGTCCTCGCAGGTATCAATAAT CTGGCCAGCATAAGCGATCTTGGAGGCACCCGCGAAGTCTACAACCAGAAGAGCGAAAACTTCGCGTTGTTCACGCATAA TATCTTCGCCATCACAGATACGCTCGATTTGACGCTGGGGCTTCGCTATACAAACGAAACCAAGGACTTCGACGCGACTT TCGGCAATGACAACACGGTTTGTCCGACAAACCGCAATTTGCTTGGCGGATTCTTGGGTGTTCCGACTTTGGCGCCTCTG GCCGGTGGCATCATCGCTCTTTCCTGCCAGGGCAATTCGACTGCGGAACTGGATGGAGTTTCTCTCGAAGACTCGCGTGA TGAAGAGGAGTTTACCGGTACGGCCATCCTGAGCTGGAAGCCTACGCCCGATCTGCTAGTCTACGGTTCGTATTCACGCG GCTACAAGGCGGGCGGTTTCAACCTCGACAGGTCTGCGCTGTCAAATCCGCTTGCGTTCGATCCGGCCAATATCTCCGCA GCCGCGCTGCAGTTCGATGAAGAAACAGTCAATGCATATGAGATCGGCCTGAAATACTCGGGGCGCGAGTTCGGGGTTAG CATTGCAGGCTTCCGGCAAGAGTTCAGCAATTTCCAATTGAACACCTTCAATGGGGCGTTCTACATCGTGCAGACTGTCA ATAGTTGCGATAGCGATCTCGGCGGGGCCGACACGGACGCAAGCGCGACAACCGGAGCATGCTCTTCCGACGAAGTTGCA CCAGGTGTGATCGCTCAAGGTGTCGAGATCGAAACCTATCTACGACCCGCTCGTGATTTGGATATTACCCTTGGCGTCAC CTATTCGGATACGAGCTTTGAAGACAATCTTATCGGGGACGATACCGGGGCACCGCTCGACCCCGCACTACGCTTGCTGC CAGGCGACAACCTGTCGAATGCACCAGAGATCGTGGCAACATCGTCGCTTACGTGGACGCCGCCAATCGGCGACAGTGGG CTCGAAGGCCTGGTCTTCGTGAACGCTCGTATGGCTGGTGATTACAACACCGGCTCCGACCTGCTCTTCGGCAAGGAACA GGACAGCTTCGTCGTAGTGAACGGGCGTGTGGGTCTGACCAATATTGCGGATCGCTTCGCGATCGAGGGATGGGTCAATA ATTTGTTTGACGTTGGGTATACGCAGGTGGCCTTCAACACGCCTTTCGTGGCTCCGCAACAAACGTTCTCCGCTTTTCTT GCGGAACCGCGGACTTACGGCATCACCGTGCGCGGCAAGTTTTAA
Upstream 100 bases:
>100_bases TCCTGACACCGTGAAGTGCTCAGGATGGGGCACATTCGTAGAGGAGAGAGACATGAAAAGAATTCCATCACGCCACCATT GCGCCCTTGGTGCATTGGCA
Downstream 100 bases:
>100_bases ACTTACTCGCTAATTGCAAGAGGGTTCGGCGCTTCGCTGTGTCGAGCCCTCTTTTTCGAACTTTTATTTGCTCACGACTA GGTGGCGTCCGAACAAAAGT
Product: TonB-dependent receptor
Products: NA
Alternate protein names: IPR65; IRPC [H]
Number of amino acids: Translated: 894; Mature: 893
Protein sequence:
>894_residues MALAFTPTAVFAQDIGEPDADLVEGADVEDQNVIIVTAQGRSQVLADVPVAVSAVSGETLQNSGASDIRELNQVAPSLLV SSTGNEANGSARIRGIGTVGDNPGLESSVAVFVDGVYRSRSGSALSELGPIDRVEILRGPQGTLGGRNSSAGLINIYTAP PEFDFSAYGAFTYGNYDAIRVEGGINAPLGDRVAARVDGVYFERDGFYNDVTNGGTINNRDRYLVRGQLLFEPNDDLSIR LVGDYSKKDEACCAATFVQPEFAPLARVSAGLDPFTRPSGGPALTSTDNPIIPILLALGQDSRALTQDTFNRDLYPTPGR SYEGETEDYGISGELNWDFGNVTLTSITGYREYANSQGSDTDYTTVDILYRAPTEDALAREFETFTQELRLSGEAFNGKL DWLIGAYYANEKLQVRDNLRFGTQYGNFVACRIAIAINPALVNPGASNCLGANVAALDGTLTGTPAFGAATPAVLAGINN LASISDLGGTREVYNQKSENFALFTHNIFAITDTLDLTLGLRYTNETKDFDATFGNDNTVCPTNRNLLGGFLGVPTLAPL AGGIIALSCQGNSTAELDGVSLEDSRDEEEFTGTAILSWKPTPDLLVYGSYSRGYKAGGFNLDRSALSNPLAFDPANISA AALQFDEETVNAYEIGLKYSGREFGVSIAGFRQEFSNFQLNTFNGAFYIVQTVNSCDSDLGGADTDASATTGACSSDEVA PGVIAQGVEIETYLRPARDLDITLGVTYSDTSFEDNLIGDDTGAPLDPALRLLPGDNLSNAPEIVATSSLTWTPPIGDSG LEGLVFVNARMAGDYNTGSDLLFGKEQDSFVVVNGRVGLTNIADRFAIEGWVNNLFDVGYTQVAFNTPFVAPQQTFSAFL AEPRTYGITVRGKF
Sequences:
>Translated_894_residues MALAFTPTAVFAQDIGEPDADLVEGADVEDQNVIIVTAQGRSQVLADVPVAVSAVSGETLQNSGASDIRELNQVAPSLLV SSTGNEANGSARIRGIGTVGDNPGLESSVAVFVDGVYRSRSGSALSELGPIDRVEILRGPQGTLGGRNSSAGLINIYTAP PEFDFSAYGAFTYGNYDAIRVEGGINAPLGDRVAARVDGVYFERDGFYNDVTNGGTINNRDRYLVRGQLLFEPNDDLSIR LVGDYSKKDEACCAATFVQPEFAPLARVSAGLDPFTRPSGGPALTSTDNPIIPILLALGQDSRALTQDTFNRDLYPTPGR SYEGETEDYGISGELNWDFGNVTLTSITGYREYANSQGSDTDYTTVDILYRAPTEDALAREFETFTQELRLSGEAFNGKL DWLIGAYYANEKLQVRDNLRFGTQYGNFVACRIAIAINPALVNPGASNCLGANVAALDGTLTGTPAFGAATPAVLAGINN LASISDLGGTREVYNQKSENFALFTHNIFAITDTLDLTLGLRYTNETKDFDATFGNDNTVCPTNRNLLGGFLGVPTLAPL AGGIIALSCQGNSTAELDGVSLEDSRDEEEFTGTAILSWKPTPDLLVYGSYSRGYKAGGFNLDRSALSNPLAFDPANISA AALQFDEETVNAYEIGLKYSGREFGVSIAGFRQEFSNFQLNTFNGAFYIVQTVNSCDSDLGGADTDASATTGACSSDEVA PGVIAQGVEIETYLRPARDLDITLGVTYSDTSFEDNLIGDDTGAPLDPALRLLPGDNLSNAPEIVATSSLTWTPPIGDSG LEGLVFVNARMAGDYNTGSDLLFGKEQDSFVVVNGRVGLTNIADRFAIEGWVNNLFDVGYTQVAFNTPFVAPQQTFSAFL AEPRTYGITVRGKF >Mature_893_residues ALAFTPTAVFAQDIGEPDADLVEGADVEDQNVIIVTAQGRSQVLADVPVAVSAVSGETLQNSGASDIRELNQVAPSLLVS STGNEANGSARIRGIGTVGDNPGLESSVAVFVDGVYRSRSGSALSELGPIDRVEILRGPQGTLGGRNSSAGLINIYTAPP EFDFSAYGAFTYGNYDAIRVEGGINAPLGDRVAARVDGVYFERDGFYNDVTNGGTINNRDRYLVRGQLLFEPNDDLSIRL VGDYSKKDEACCAATFVQPEFAPLARVSAGLDPFTRPSGGPALTSTDNPIIPILLALGQDSRALTQDTFNRDLYPTPGRS YEGETEDYGISGELNWDFGNVTLTSITGYREYANSQGSDTDYTTVDILYRAPTEDALAREFETFTQELRLSGEAFNGKLD WLIGAYYANEKLQVRDNLRFGTQYGNFVACRIAIAINPALVNPGASNCLGANVAALDGTLTGTPAFGAATPAVLAGINNL ASISDLGGTREVYNQKSENFALFTHNIFAITDTLDLTLGLRYTNETKDFDATFGNDNTVCPTNRNLLGGFLGVPTLAPLA GGIIALSCQGNSTAELDGVSLEDSRDEEEFTGTAILSWKPTPDLLVYGSYSRGYKAGGFNLDRSALSNPLAFDPANISAA ALQFDEETVNAYEIGLKYSGREFGVSIAGFRQEFSNFQLNTFNGAFYIVQTVNSCDSDLGGADTDASATTGACSSDEVAP GVIAQGVEIETYLRPARDLDITLGVTYSDTSFEDNLIGDDTGAPLDPALRLLPGDNLSNAPEIVATSSLTWTPPIGDSGL EGLVFVNARMAGDYNTGSDLLFGKEQDSFVVVNGRVGLTNIADRFAIEGWVNNLFDVGYTQVAFNTPFVAPQQTFSAFLA EPRTYGITVRGKF
Specific function: Receptor for the bacteriocin pesticin and for the siderophore yersiniabactin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 95124; Mature: 94993
Theoretical pI: Translated: 3.98; Mature: 3.98
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.1 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALAFTPTAVFAQDIGEPDADLVEGADVEDQNVIIVTAQGRSQVLADVPVAVSAVSGETL CEEEECCHHHHHHHCCCCCHHHHCCCCCCCCCEEEEEECCCCCEEEECCEEEEECCCCHH QNSGASDIRELNQVAPSLLVSSTGNEANGSARIRGIGTVGDNPGLESSVAVFVDGVYRSR HCCCHHHHHHHHHHHHHEEEECCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEECHHCCC SGSALSELGPIDRVEILRGPQGTLGGRNSSAGLINIYTAPPEFDFSAYGAFTYGNYDAIR CCCHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCEEEEE VEGGINAPLGDRVAARVDGVYFERDGFYNDVTNGGTINNRDRYLVRGQLLFEPNDDLSIR ECCCCCCCCCCCHHHHCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEE LVGDYSKKDEACCAATFVQPEFAPLARVSAGLDPFTRPSGGPALTSTDNPIIPILLALGQ EEECCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC DSRALTQDTFNRDLYPTPGRSYEGETEDYGISGELNWDFGNVTLTSITGYREYANSQGSD CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECHHHHHCCCCCC TDYTTVDILYRAPTEDALAREFETFTQELRLSGEAFNGKLDWLIGAYYANEKLQVRDNLR CCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCEEEEECCCE FGTQYGNFVACRIAIAINPALVNPGASNCLGANVAALDGTLTGTPAFGAATPAVLAGINN ECCCCCCEEEEEEEEEECCEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHCCHH LASISDLGGTREVYNQKSENFALFTHNIFAITDTLDLTLGLRYTNETKDFDATFGNDNTV HHHHHHCCCCHHHHCCCCCCEEEEEEEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCEE CPTNRNLLGGFLGVPTLAPLAGGIIALSCQGNSTAELDGVSLEDSRDEEEFTGTAILSWK CCCCCCHHHHHHCCCHHHHHCCCEEEEEECCCCCCEECCCCCCCCCCCHHHCCEEEEEEC PTPDLLVYGSYSRGYKAGGFNLDRSALSNPLAFDPANISAAALQFDEETVNAYEIGLKYS CCCCEEEEECCCCCCCCCCCCCCHHHHCCCCEECCCCCEEEEEEECCCCCCEEEEEEEEC GREFGVSIAGFRQEFSNFQLNTFNGAFYIVQTVNSCDSDLGGADTDASATTGACSSDEVA CHHHCEEHHHHHHHHCCCEEEECCCEEEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCC PGVIAQGVEIETYLRPARDLDITLGVTYSDTSFEDNLIGDDTGAPLDPALRLLPGDNLSN CCHHHCCCEEEHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHEEECCCCCCC APEIVATSSLTWTPPIGDSGLEGLVFVNARMAGDYNTGSDLLFGKEQDSFVVVNGRVGLT CCCEEEECCEEECCCCCCCCCCEEEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCH NIADRFAIEGWVNNLFDVGYTQVAFNTPFVAPQQTFSAFLAEPRTYGITVRGKF HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEEEECC >Mature Secondary Structure ALAFTPTAVFAQDIGEPDADLVEGADVEDQNVIIVTAQGRSQVLADVPVAVSAVSGETL EEEECCHHHHHHHCCCCCHHHHCCCCCCCCCEEEEEECCCCCEEEECCEEEEECCCCHH QNSGASDIRELNQVAPSLLVSSTGNEANGSARIRGIGTVGDNPGLESSVAVFVDGVYRSR HCCCHHHHHHHHHHHHHEEEECCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEECHHCCC SGSALSELGPIDRVEILRGPQGTLGGRNSSAGLINIYTAPPEFDFSAYGAFTYGNYDAIR CCCHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCEEEEE VEGGINAPLGDRVAARVDGVYFERDGFYNDVTNGGTINNRDRYLVRGQLLFEPNDDLSIR ECCCCCCCCCCCHHHHCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEE LVGDYSKKDEACCAATFVQPEFAPLARVSAGLDPFTRPSGGPALTSTDNPIIPILLALGQ EEECCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC DSRALTQDTFNRDLYPTPGRSYEGETEDYGISGELNWDFGNVTLTSITGYREYANSQGSD CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECHHHHHCCCCCC TDYTTVDILYRAPTEDALAREFETFTQELRLSGEAFNGKLDWLIGAYYANEKLQVRDNLR CCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCEEEEECCCE FGTQYGNFVACRIAIAINPALVNPGASNCLGANVAALDGTLTGTPAFGAATPAVLAGINN ECCCCCCEEEEEEEEEECCEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHCCHH LASISDLGGTREVYNQKSENFALFTHNIFAITDTLDLTLGLRYTNETKDFDATFGNDNTV HHHHHHCCCCHHHHCCCCCCEEEEEEEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCEE CPTNRNLLGGFLGVPTLAPLAGGIIALSCQGNSTAELDGVSLEDSRDEEEFTGTAILSWK CCCCCCHHHHHHCCCHHHHHCCCEEEEEECCCCCCEECCCCCCCCCCCHHHCCEEEEEEC PTPDLLVYGSYSRGYKAGGFNLDRSALSNPLAFDPANISAAALQFDEETVNAYEIGLKYS CCCCEEEEECCCCCCCCCCCCCCHHHHCCCCEECCCCCEEEEEEECCCCCCEEEEEEEEC GREFGVSIAGFRQEFSNFQLNTFNGAFYIVQTVNSCDSDLGGADTDASATTGACSSDEVA CHHHCEEHHHHHHHHCCCEEEECCCEEEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCC PGVIAQGVEIETYLRPARDLDITLGVTYSDTSFEDNLIGDDTGAPLDPALRLLPGDNLSN CCHHHCCCEEEHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHEEECCCCCCC APEIVATSSLTWTPPIGDSGLEGLVFVNARMAGDYNTGSDLLFGKEQDSFVVVNGRVGLT CCCEEEECCEEECCCCCCCCCCEEEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCH NIADRFAIEGWVNNLFDVGYTQVAFNTPFVAPQQTFSAFLAEPRTYGITVRGKF HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA