Click here to switch to the map view.

The map label for this gene is ybeB [H]

Identifier: 85375473

GI number: 85375473

Start: 2664868

End: 2665230

Strand: Direct

Name: ybeB [H]

Synonym: ELI_13230

Alternate gene names: 85375473

Gene position: 2664868-2665230 (Clockwise)

Preceding gene: 85375472

Following gene: 85375474

Centisome position: 87.3

GC content: 65.29

Gene sequence:

>363_bases
ATGGCTGATGCCGAACCCGGCTCGCTGCACGCTCTGGTGCTAGAGCAGCTCGACGAGGACCAGGCGCAGGAAATCGTCTC
GATCCCGCTCGAGGGCCGCTCCTCGATCGCCGATCACTTGATTATTGCCTCGGGCCGCTCCACCCGGCAGGTCGCATCGA
TCGCGCAGAAGCTGTCGGAAAAGATCAAGCAGGCCGGGCACGGCCCCGTCCGGCTCGAAGGATTGCCCGCAGCCGATTGG
GTGCTGGTCGATGCGGGCGATGTCGTTGTGCACCTGTTCCGCCCCGAAGTGCGCAGCTTCTACAATCTCGAACGCATGTG
GGCCTTCGGCGAAGCGCCGCCCGCCGCCGCAGGAAACGCTTAG

Upstream 100 bases:

>100_bases
CGGCTCGGTCGCTTCCTACCTACGCATCATGACAGGAGTATCCAATTCGCCCATGACACCGGCGCAATCCATCACGTCCG
ACCACGGCCTCATGTCTCCC

Downstream 100 bases:

>100_bases
CGCGACGAAACAGGAAATTTCGCGGAGCACGGTTCGCGACCAGCGAACCGCAAGGGCGACCGCCCGCCCGCAGGGATGCG
ACCGAAGGTCGCGTGAGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MADAEPGSLHALVLEQLDEDQAQEIVSIPLEGRSSIADHLIIASGRSTRQVASIAQKLSEKIKQAGHGPVRLEGLPAADW
VLVDAGDVVVHLFRPEVRSFYNLERMWAFGEAPPAAAGNA

Sequences:

>Translated_120_residues
MADAEPGSLHALVLEQLDEDQAQEIVSIPLEGRSSIADHLIIASGRSTRQVASIAQKLSEKIKQAGHGPVRLEGLPAADW
VLVDAGDVVVHLFRPEVRSFYNLERMWAFGEAPPAAAGNA
>Mature_119_residues
ADAEPGSLHALVLEQLDEDQAQEIVSIPLEGRSSIADHLIIASGRSTRQVASIAQKLSEKIKQAGHGPVRLEGLPAADWV
LVDAGDVVVHLFRPEVRSFYNLERMWAFGEAPPAAAGNA

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Iojap family [H]

Homologues:

Organism=Homo sapiens, GI19923977, Length=101, Percent_Identity=31.6831683168317, Blast_Score=66, Evalue=6e-12,
Organism=Escherichia coli, GI87081768, Length=101, Percent_Identity=39.6039603960396, Blast_Score=94, Evalue=3e-21,
Organism=Drosophila melanogaster, GI19923046, Length=101, Percent_Identity=32.6732673267327, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004394 [H]

Pfam domain/function: PF02410 DUF143 [H]

EC number: NA

Molecular weight: Translated: 12877; Mature: 12745

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADAEPGSLHALVLEQLDEDQAQEIVSIPLEGRSSIADHLIIASGRSTRQVASIAQKLSE
CCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHEEEEECCCCHHHHHHHHHHHHH
KIKQAGHGPVRLEGLPAADWVLVDAGDVVVHLFRPEVRSFYNLERMWAFGEAPPAAAGNA
HHHHCCCCCEEECCCCCCCEEEEECCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
ADAEPGSLHALVLEQLDEDQAQEIVSIPLEGRSSIADHLIIASGRSTRQVASIAQKLSE
CCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHEEEEECCCCHHHHHHHHHHHHH
KIKQAGHGPVRLEGLPAADWVLVDAGDVVVHLFRPEVRSFYNLERMWAFGEAPPAAAGNA
HHHHCCCCCEEECCCCCCCEEEEECCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]