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The map label for this gene is 85374548

Identifier: 85374548

GI number: 85374548

Start: 1760456

End: 1760902

Strand: Reverse

Name: 85374548

Synonym: ELI_08605

Alternate gene names: NA

Gene position: 1760902-1760456 (Counterclockwise)

Preceding gene: 85374549

Following gene: 85374543

Centisome position: 57.69

GC content: 64.21

Gene sequence:

>447_bases
GTGACGACATTCGACGATGGCAAGGACGACGGCGCATTGCGCACCATCGGCGAAGTCGGGACGGCACTGGGGCTGAAACC
GCATGTCCTGCGCTATTGGGAAGAACAATTCCCCATGCTCCAGCCGCTCAAGCGCAGCGGCAATCGGCGCTATTACCGGC
CTGAAGATGTCGCACTCGTCGAGACGATCGACCGCTTGGTCAACCACGAAGGCTACACGCTGAAGGGTGCGAAGCAGGCG
ATCGAAGAGGGTCGCGTTGCAATGGCCGAAGCGTCGCCATCTGCGCCCGCGAAGGCGGAGGCGCCGGAGACTGTCGAGGA
AGAGCGCCTGCCGAAACCGGTCGGGCCATCCAGCGAGAACAAAGACAGGGGCGCGGATATTCCCGCCGACGTGCTGGCCG
AACTCAAGGGCATTCGCGAGCGGCTCGCCGCCGCCATCGACGCCTGA

Upstream 100 bases:

>100_bases
AACCCCAAGACCGGCGTTGAAGTGCCGATAACTCCGCGCCGGGTCATGACTTTCCGCGCCAGCCAGCTATTACGGGAGAG
GATAGCGAAGGGAGGCTGAT

Downstream 100 bases:

>100_bases
ACTTCAATTTTGAGAACCAGGTCGGCGCGACCTACTCCGCCGCCATCAGTTCGGCTTCCTGCAAGTCCACGCTGACCAGG
CGGCTGATGCCTTTTTCGAC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MTTFDDGKDDGALRTIGEVGTALGLKPHVLRYWEEQFPMLQPLKRSGNRRYYRPEDVALVETIDRLVNHEGYTLKGAKQA
IEEGRVAMAEASPSAPAKAEAPETVEEERLPKPVGPSSENKDRGADIPADVLAELKGIRERLAAAIDA

Sequences:

>Translated_148_residues
MTTFDDGKDDGALRTIGEVGTALGLKPHVLRYWEEQFPMLQPLKRSGNRRYYRPEDVALVETIDRLVNHEGYTLKGAKQA
IEEGRVAMAEASPSAPAKAEAPETVEEERLPKPVGPSSENKDRGADIPADVLAELKGIRERLAAAIDA
>Mature_147_residues
TTFDDGKDDGALRTIGEVGTALGLKPHVLRYWEEQFPMLQPLKRSGNRRYYRPEDVALVETIDRLVNHEGYTLKGAKQAI
EEGRVAMAEASPSAPAKAEAPETVEEERLPKPVGPSSENKDRGADIPADVLAELKGIRERLAAAIDA

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551 [H]

Pfam domain/function: PF00376 MerR [H]

EC number: NA

Molecular weight: Translated: 16208; Mature: 16077

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTFDDGKDDGALRTIGEVGTALGLKPHVLRYWEEQFPMLQPLKRSGNRRYYRPEDVALV
CCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHH
ETIDRLVNHEGYTLKGAKQAIEEGRVAMAEASPSAPAKAEAPETVEEERLPKPVGPSSEN
HHHHHHHCCCCCCCHHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC
KDRGADIPADVLAELKGIRERLAAAIDA
CCCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTFDDGKDDGALRTIGEVGTALGLKPHVLRYWEEQFPMLQPLKRSGNRRYYRPEDVALV
CCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHH
ETIDRLVNHEGYTLKGAKQAIEEGRVAMAEASPSAPAKAEAPETVEEERLPKPVGPSSEN
HHHHHHHCCCCCCCHHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC
KDRGADIPADVLAELKGIRERLAAAIDA
CCCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1961742 [H]