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The map label for this gene is ynhG [C]

Identifier: 85373877

GI number: 85373877

Start: 1085374

End: 1086651

Strand: Direct

Name: ynhG [C]

Synonym: ELI_05250

Alternate gene names: 85373877

Gene position: 1085374-1086651 (Clockwise)

Preceding gene: 85373876

Following gene: 85373878

Centisome position: 35.56

GC content: 62.05

Gene sequence:

>1278_bases
ATGCGTGTCGCCCTTCTTGCCACCCTTTCTACCTTCGCACTTGTCGCGTGCGGCCCAAGTGCGGAATCGGGCGACAGCAG
CGAGCAACAAACGGCTGCCGCCGAAACGAACGATTACGGCTACGAGACGTATAGCGACGACAATCTCGCCGATACGATGG
CGTCCAACGATGATCGCTACATGGACGAGAGCGGATCCGATGCCGGGAGCGAGGACGCGACGCCTACCGACCTCCCCGAT
TCCGAAGAGCGCCCCATCATGCAGGCCCAGGTCGTACTCGACCGTGCAGGTTTCGGCCCCGGAGTCATCGACGGCAAGAT
GGGCATGAGCACGGAAAACGCGCTGCTGGGATTTCAGGAGGCCAATGACCTTGAGACGAGCGGCAAGCTCGATGACGCTA
CGAAGGAAGCGCTGAAAGATTGGGAGCGCATCCCTGCAACTCGCGTGGTGACCATTCCCACGAGCTGGAGCGATGCGACC
TACTCCGACATCCCGGACGATACCGCGGCCAAGGCAAAAATGGAAAGGCTCGGCTATCGTTCGCTCGATGAACGGGTCGC
GGAGCGATTCCACACGACGGTCGATGTGCTCAAGCGGCTCAACCCCAACGGAAAGCCTGCCGGATCGCAGACTGGCACAG
GTTCGCAGGGCAACAGCGGTGCCGAGGGGGCCGATGACCGCAGCTCGAGCGCTACGCCGAGCTCGACGTCGAGCAGCACC
GGCGGCGCATCTAAAACAAGCGAAGGTTTTTTCCGCGCCGGCCAGCAAATTCGCGTTCCCAATATCGGTGCCGACCGGAT
CGCACCCGGATCGCTCGAAGACACAGACTGGCAGCGCACGCTGGCATCGCTCGGTGTCGGGACCGAGCAGCCCGAAGTCG
ACCGGATCGTGGTGAGCAAGTCCGAAGATACCCTCAAAGCCTACAAGGGCGATACCCTGGTCGCCATGTTCACCGTCAGC
TCGGGTTCCAGTGAGTTCCCGCTGCCGCTGGGTGAATGGGACATTGTCGGCGAGGCGTACAATCCGCCTTACAGCTATGA
CCCGGAGGTGCTTGGGCAGGGCGAGGGCGAGACCTATACCTTGCCGCCGGGACCCAACGGGATGGTCGGCGTGGTCTGGA
TCGATCTCAGCAAAGAGCACTATGGCATCCACGGAACGCCCGAGCCTGAAACCATTGGCCGCGCGCAATCGAGCGGCTGC
GTGCGCCTGACAAACTGGGATGCGGCACGGCTCAGCCAGATGGTTTCGACCGATACTGCAGTGGAATTCGTCGCGTGA

Upstream 100 bases:

>100_bases
AAAGAGCGGCAGTTCAAGCCTTTGCGGAGCAAATAGCCGCGGCGTGAGTTGAACTTTTCGAAAAGGGGCAAAATGCGCCC
CGTCATTCGGGAGTTTCCTC

Downstream 100 bases:

>100_bases
TCGGCTAAGACACTTGGATGAAGTTCCTTGATCGCATTCTCACAATAGTCATCACCGCCACGGTAACGTCGATGATCTGG
ATCGTCGCCGGTGGCAGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: Spore protein YkuD homolog [H]

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MRVALLATLSTFALVACGPSAESGDSSEQQTAAAETNDYGYETYSDDNLADTMASNDDRYMDESGSDAGSEDATPTDLPD
SEERPIMQAQVVLDRAGFGPGVIDGKMGMSTENALLGFQEANDLETSGKLDDATKEALKDWERIPATRVVTIPTSWSDAT
YSDIPDDTAAKAKMERLGYRSLDERVAERFHTTVDVLKRLNPNGKPAGSQTGTGSQGNSGAEGADDRSSSATPSSTSSST
GGASKTSEGFFRAGQQIRVPNIGADRIAPGSLEDTDWQRTLASLGVGTEQPEVDRIVVSKSEDTLKAYKGDTLVAMFTVS
SGSSEFPLPLGEWDIVGEAYNPPYSYDPEVLGQGEGETYTLPPGPNGMVGVVWIDLSKEHYGIHGTPEPETIGRAQSSGC
VRLTNWDAARLSQMVSTDTAVEFVA

Sequences:

>Translated_425_residues
MRVALLATLSTFALVACGPSAESGDSSEQQTAAAETNDYGYETYSDDNLADTMASNDDRYMDESGSDAGSEDATPTDLPD
SEERPIMQAQVVLDRAGFGPGVIDGKMGMSTENALLGFQEANDLETSGKLDDATKEALKDWERIPATRVVTIPTSWSDAT
YSDIPDDTAAKAKMERLGYRSLDERVAERFHTTVDVLKRLNPNGKPAGSQTGTGSQGNSGAEGADDRSSSATPSSTSSST
GGASKTSEGFFRAGQQIRVPNIGADRIAPGSLEDTDWQRTLASLGVGTEQPEVDRIVVSKSEDTLKAYKGDTLVAMFTVS
SGSSEFPLPLGEWDIVGEAYNPPYSYDPEVLGQGEGETYTLPPGPNGMVGVVWIDLSKEHYGIHGTPEPETIGRAQSSGC
VRLTNWDAARLSQMVSTDTAVEFVA
>Mature_425_residues
MRVALLATLSTFALVACGPSAESGDSSEQQTAAAETNDYGYETYSDDNLADTMASNDDRYMDESGSDAGSEDATPTDLPD
SEERPIMQAQVVLDRAGFGPGVIDGKMGMSTENALLGFQEANDLETSGKLDDATKEALKDWERIPATRVVTIPTSWSDAT
YSDIPDDTAAKAKMERLGYRSLDERVAERFHTTVDVLKRLNPNGKPAGSQTGTGSQGNSGAEGADDRSSSATPSSTSSST
GGASKTSEGFFRAGQQIRVPNIGADRIAPGSLEDTDWQRTLASLGVGTEQPEVDRIVVSKSEDTLKAYKGDTLVAMFTVS
SGSSEFPLPLGEWDIVGEAYNPPYSYDPEVLGQGEGETYTLPPGPNGMVGVVWIDLSKEHYGIHGTPEPETIGRAQSSGC
VRLTNWDAARLSQMVSTDTAVEFVA

Specific function: Probable enzyme that may play an important role in cell wall biology [H]

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Spore wall. Note=Probably localized either on the surface of the outer spore membrane and/or in the inner spore coat (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR005490 [H]

Pfam domain/function: PF01476 LysM; PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 45121; Mature: 45121

Theoretical pI: Translated: 4.04; Mature: 4.04

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVALLATLSTFALVACGPSAESGDSSEQQTAAAETNDYGYETYSDDNLADTMASNDDRY
CEEEEEEHHHHHEEEEECCCCCCCCCCHHHHHHHCCCCCCCEECCCCCHHHHHHCCCCCC
MDESGSDAGSEDATPTDLPDSEERPIMQAQVVLDRAGFGPGVIDGKMGMSTENALLGFQE
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEECCCCCCCCCHHEEECCC
ANDLETSGKLDDATKEALKDWERIPATRVVTIPTSWSDATYSDIPDDTAAKAKMERLGYR
CCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCH
SLDERVAERFHTTVDVLKRLNPNGKPAGSQTGTGSQGNSGAEGADDRSSSATPSSTSSST
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GGASKTSEGFFRAGQQIRVPNIGADRIAPGSLEDTDWQRTLASLGVGTEQPEVDRIVVSK
CCCCCCCHHHHHCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEC
SEDTLKAYKGDTLVAMFTVSSGSSEFPLPLGEWDIVGEAYNPPYSYDPEVLGQGEGETYT
CCHHHHHHCCCEEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCHHCCCCCCCEEE
LPPGPNGMVGVVWIDLSKEHYGIHGTPEPETIGRAQSSGCVRLTNWDAARLSQMVSTDTA
CCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHH
VEFVA
HEECC
>Mature Secondary Structure
MRVALLATLSTFALVACGPSAESGDSSEQQTAAAETNDYGYETYSDDNLADTMASNDDRY
CEEEEEEHHHHHEEEEECCCCCCCCCCHHHHHHHCCCCCCCEECCCCCHHHHHHCCCCCC
MDESGSDAGSEDATPTDLPDSEERPIMQAQVVLDRAGFGPGVIDGKMGMSTENALLGFQE
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEECCCCCCCCCHHEEECCC
ANDLETSGKLDDATKEALKDWERIPATRVVTIPTSWSDATYSDIPDDTAAKAKMERLGYR
CCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCH
SLDERVAERFHTTVDVLKRLNPNGKPAGSQTGTGSQGNSGAEGADDRSSSATPSSTSSST
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GGASKTSEGFFRAGQQIRVPNIGADRIAPGSLEDTDWQRTLASLGVGTEQPEVDRIVVSK
CCCCCCCHHHHHCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEC
SEDTLKAYKGDTLVAMFTVSSGSSEFPLPLGEWDIVGEAYNPPYSYDPEVLGQGEGETYT
CCHHHHHHCCCEEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCHHCCCCCCCEEE
LPPGPNGMVGVVWIDLSKEHYGIHGTPEPETIGRAQSSGCVRLTNWDAARLSQMVSTDTA
CCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHH
VEFVA
HEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA