| Definition | Erythrobacter litoralis HTCC2594 chromosome, complete genome. |
|---|---|
| Accession | NC_007722 |
| Length | 3,052,398 |
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The map label for this gene is trxB [H]
Identifier: 85373767
GI number: 85373767
Start: 972522
End: 973511
Strand: Direct
Name: trxB [H]
Synonym: ELI_04700
Alternate gene names: 85373767
Gene position: 972522-973511 (Clockwise)
Preceding gene: 85373766
Following gene: 85373771
Centisome position: 31.86
GC content: 62.63
Gene sequence:
>990_bases ATGACTACCCATCGCACCAAGATGCTCATCATCGGTTCCGGCCCGGCCGGTTATTCCGCCGCGATCTATGGCGCGCGCGC GATGATGGAACCGATCGTGGTGCAGGGTATCCAGCCCGGCGGCCAGCTGACCATCACTACCGATGTCGAGAACTATCCCG GCTTCGAAGAGGTGATCCAGGGGCCGTGGCTGATGGAGCAGATGCAGAAGCAGGCCGAGCATGTCGGCACGCGCATGATG TGGGATACCATCGTCGACGTCGATATCGAGAACGGCTCGCCCTTCCGCGCCGTCGGCGACAGCGGCGATGAATATATCGG CGACGTGCTGATCATCGCCACCGGCGCGCAGGCCAAGTGGCTCGGCGTGCCCGGCGAGCAGGAACTCGGCGGCAAGGGCG TTTCCGCCTGTGCGACCTGCGACGGGTTCTTCTATCGCGGCAAGAAAGTCGCGGTCATCGGCGGTGGCAATACCGCGGTC GAGGAAGCGCTCTATCTTACCAATCATTCCGACGACGTGACGCTGATCCATCGCCGCGACGAGCTGCGCAGCGAGAAAAT CCTGCAGGAGCGGCTGTTCAAGTCGGACAAGATCTCGACCCTGTGGAACAAAACCGTCGAGAGCTTCGAGGCGGGTGAAG ACGGCATGCTGAGCCATCTCGTGCTCAAGGACACGCAGACCGGCGAATTGTCCAACCTCGAAGTCGACGGAGCCTTCGTC GCGATCGGCCACGCGCCTGCGACCGAATTGTTCAAAGGCAAGCTGCCGATGGACGAAACCGGCTATTTGCTGGTCGAGCC GGGCACGCCCAAGACCGCGATTCCGGGCGTATTTGCCGCCGGCGACGTGATGGATCACATCTATCGCCAGGCGGTCACCG CTGCGGGTGTGGGCTGCATGGCCGCGCTCGATGCAGAACGCTTCCTCGCAAACCTGGAAATCGACATCGACGGCCATGTC CACGCGCCTCAAACCGAGGCGGCGGAGTGA
Upstream 100 bases:
>100_bases TGGAAAGCTAACCAGATCGGCTGGACCGGCGCAGGAGCAGCCCGCAGAGAGGGCTTTCGGCTCGCGGCAAGAGACCGCGC CCCAGACAGGACACGAGAAA
Downstream 100 bases:
>100_bases ACTTCGGGCGAGCCCCAGCGTAGGCTGGGGCCTCCATCAGCCTGGCATCGCGCCAGTGGTATGAGGTCCCAGCCTCCGCT GGGACTCCCGCGTTTCTTAC
Product: thioredoxin reductase
Products: NA
Alternate protein names: TRXR [H]
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MTTHRTKMLIIGSGPAGYSAAIYGARAMMEPIVVQGIQPGGQLTITTDVENYPGFEEVIQGPWLMEQMQKQAEHVGTRMM WDTIVDVDIENGSPFRAVGDSGDEYIGDVLIIATGAQAKWLGVPGEQELGGKGVSACATCDGFFYRGKKVAVIGGGNTAV EEALYLTNHSDDVTLIHRRDELRSEKILQERLFKSDKISTLWNKTVESFEAGEDGMLSHLVLKDTQTGELSNLEVDGAFV AIGHAPATELFKGKLPMDETGYLLVEPGTPKTAIPGVFAAGDVMDHIYRQAVTAAGVGCMAALDAERFLANLEIDIDGHV HAPQTEAAE
Sequences:
>Translated_329_residues MTTHRTKMLIIGSGPAGYSAAIYGARAMMEPIVVQGIQPGGQLTITTDVENYPGFEEVIQGPWLMEQMQKQAEHVGTRMM WDTIVDVDIENGSPFRAVGDSGDEYIGDVLIIATGAQAKWLGVPGEQELGGKGVSACATCDGFFYRGKKVAVIGGGNTAV EEALYLTNHSDDVTLIHRRDELRSEKILQERLFKSDKISTLWNKTVESFEAGEDGMLSHLVLKDTQTGELSNLEVDGAFV AIGHAPATELFKGKLPMDETGYLLVEPGTPKTAIPGVFAAGDVMDHIYRQAVTAAGVGCMAALDAERFLANLEIDIDGHV HAPQTEAAE >Mature_328_residues TTHRTKMLIIGSGPAGYSAAIYGARAMMEPIVVQGIQPGGQLTITTDVENYPGFEEVIQGPWLMEQMQKQAEHVGTRMMW DTIVDVDIENGSPFRAVGDSGDEYIGDVLIIATGAQAKWLGVPGEQELGGKGVSACATCDGFFYRGKKVAVIGGGNTAVE EALYLTNHSDDVTLIHRRDELRSEKILQERLFKSDKISTLWNKTVESFEAGEDGMLSHLVLKDTQTGELSNLEVDGAFVA IGHAPATELFKGKLPMDETGYLLVEPGTPKTAIPGVFAAGDVMDHIYRQAVTAAGVGCMAALDAERFLANLEIDIDGHVH APQTEAAE
Specific function: Unknown
COG id: COG0492
COG function: function code O; Thioredoxin reductase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI1787114, Length=319, Percent_Identity=55.1724137931034, Blast_Score=339, Evalue=1e-94, Organism=Escherichia coli, GI87081763, Length=306, Percent_Identity=32.3529411764706, Blast_Score=129, Evalue=3e-31, Organism=Saccharomyces cerevisiae, GI6321898, Length=318, Percent_Identity=46.8553459119497, Blast_Score=281, Evalue=7e-77, Organism=Saccharomyces cerevisiae, GI6320560, Length=318, Percent_Identity=45.9119496855346, Blast_Score=278, Evalue=9e-76,
Paralogues:
None
Copy number: 808 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR008255 - InterPro: IPR001327 - InterPro: IPR000103 - InterPro: IPR005982 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: =1.8.1.9 [H]
Molecular weight: Translated: 35368; Mature: 35237
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: PS00573 PYRIDINE_REDOX_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTHRTKMLIIGSGPAGYSAAIYGARAMMEPIVVQGIQPGGQLTITTDVENYPGFEEVIQ CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHC GPWLMEQMQKQAEHVGTRMMWDTIVDVDIENGSPFRAVGDSGDEYIGDVLIIATGAQAKW CCHHHHHHHHHHHHHCHHEEEEEEEEEEECCCCCCEEECCCCCHHHCEEEEEEECCCEEE LGVPGEQELGGKGVSACATCDGFFYRGKKVAVIGGGNTAVEEALYLTNHSDDVTLIHRRD ECCCCCHHCCCCCCCHHEECCCCEECCCEEEEEECCCHHHHHEEEEECCCCCEEEEECHH ELRSEKILQERLFKSDKISTLWNKTVESFEAGEDGMLSHLVLKDTQTGELSNLEVDGAFV HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEECCEEE AIGHAPATELFKGKLPMDETGYLLVEPGTPKTAIPGVFAAGDVMDHIYRQAVTAAGVGCM EECCCCHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHH AALDAERFLANLEIDIDGHVHAPQTEAAE HHHHHHHHHEEEEEEECCCEECCCCCCCC >Mature Secondary Structure TTHRTKMLIIGSGPAGYSAAIYGARAMMEPIVVQGIQPGGQLTITTDVENYPGFEEVIQ CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHC GPWLMEQMQKQAEHVGTRMMWDTIVDVDIENGSPFRAVGDSGDEYIGDVLIIATGAQAKW CCHHHHHHHHHHHHHCHHEEEEEEEEEEECCCCCCEEECCCCCHHHCEEEEEEECCCEEE LGVPGEQELGGKGVSACATCDGFFYRGKKVAVIGGGNTAVEEALYLTNHSDDVTLIHRRD ECCCCCHHCCCCCCCHHEECCCCEECCCEEEEEECCCHHHHHEEEEECCCCCEEEEECHH ELRSEKILQERLFKSDKISTLWNKTVESFEAGEDGMLSHLVLKDTQTGELSNLEVDGAFV HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEECCEEE AIGHAPATELFKGKLPMDETGYLLVEPGTPKTAIPGVFAAGDVMDHIYRQAVTAAGVGCM EECCCCHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHH AALDAERFLANLEIDIDGHVHAPQTEAAE HHHHHHHHHEEEEEEECCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA