| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is damX [H]
Identifier: 85060285
GI number: 85060285
Start: 3965830
End: 3966696
Strand: Reverse
Name: damX [H]
Synonym: SG2307
Alternate gene names: 85060285
Gene position: 3966696-3965830 (Counterclockwise)
Preceding gene: 85060286
Following gene: 85060284
Centisome position: 95.1
GC content: 59.98
Gene sequence:
>867_bases ATGGATGAGTTCAAGTCGGAAGACGAACTGAGACCCGATAGCAGCGACCGCCGTCCCCCCCGCCAGCGGAAAAGACCTAC CGTGCCGAAAGTACCTGTATCCAGACAGCATTTGATGATAGGTATCGGTATTTTGGTGCTGCTGTTGCTGGTGATAAGTA TTGGTTCAGCGCTGAAATCTCCGTCCCGAACCGATTCAGGCCACCAGGGCGCGGACAATAACGGTCAGCGTAATATCGAT CTCTCCGGCTCCGACGCGGGTCCGTCTTCGCCTGGCGCTACCGCGCCGACAGCAAACAACGCACAGAACGGCGCGCCGGT GACTACGCCGAGCGGACAGCAACGCGTGGAATTACCGGGCAACATGGCCGATGCCTTGTCGCAGCAGGGAAGCCAGGTCA ACGGCGGGACCGCACAAATGAACGGCCAAGGGCCGGTTTCCACCTTGCCCACCGCTGCCCGCTGGGAGCCGAAACAAACG CCGATGGTGCCGAGTGCCGACCGCCAGACCGCCAGACCGCCAAAAGCGGCTGCGAGCTCTCGCGCCCCTGCGCCGTCCGC TTCTTCCACGTCCAGTGGGGGCGCCGCGGGTTCGATACAGTCTGCGCCCGCCGGTTATTACACGCTACAGTTGAGTAGCG CTTCGCAGCCGGCGACGCTCAACGCCTATGCGCGTCAACAGCAGCTGAGCCATTACTGGGTTTATCAGACCCGCCGCGAC GGCAAGCCTTGGTACGTGTTGGTAAACGGGGTTTATCCTTCGCTATCGCAGGCCAAAAACGCGGTGGCAAAATTGCCCGC CGATGTACAGGCTAAAAAGCCCTGGGCGCGGCAAATTGGTCAGGTTAAAAAGGACCAAAATAATTAA
Upstream 100 bases:
>100_bases GGCCGCGCGCCAGGGCGCGTCGGTGAAGCCCGGTTTAATGTGATAAACCCTTCCCGCGCTCCGGCGCTGGAAAAACCCCT CTCATGTCGGAGAGTTTTAT
Downstream 100 bases:
>100_bases GCGTTCCTGAAGATAGCACTGTAGCGTTATGGTAAACAGGGTACAATCCGCGGTTCTGAAGAGTGTGAGTAAGTAGCGAA GGCATGAAGAAGAACCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MDEFKSEDELRPDSSDRRPPRQRKRPTVPKVPVSRQHLMIGIGILVLLLLVISIGSALKSPSRTDSGHQGADNNGQRNID LSGSDAGPSSPGATAPTANNAQNGAPVTTPSGQQRVELPGNMADALSQQGSQVNGGTAQMNGQGPVSTLPTAARWEPKQT PMVPSADRQTARPPKAAASSRAPAPSASSTSSGGAAGSIQSAPAGYYTLQLSSASQPATLNAYARQQQLSHYWVYQTRRD GKPWYVLVNGVYPSLSQAKNAVAKLPADVQAKKPWARQIGQVKKDQNN
Sequences:
>Translated_288_residues MDEFKSEDELRPDSSDRRPPRQRKRPTVPKVPVSRQHLMIGIGILVLLLLVISIGSALKSPSRTDSGHQGADNNGQRNID LSGSDAGPSSPGATAPTANNAQNGAPVTTPSGQQRVELPGNMADALSQQGSQVNGGTAQMNGQGPVSTLPTAARWEPKQT PMVPSADRQTARPPKAAASSRAPAPSASSTSSGGAAGSIQSAPAGYYTLQLSSASQPATLNAYARQQQLSHYWVYQTRRD GKPWYVLVNGVYPSLSQAKNAVAKLPADVQAKKPWARQIGQVKKDQNN >Mature_288_residues MDEFKSEDELRPDSSDRRPPRQRKRPTVPKVPVSRQHLMIGIGILVLLLLVISIGSALKSPSRTDSGHQGADNNGQRNID LSGSDAGPSSPGATAPTANNAQNGAPVTTPSGQQRVELPGNMADALSQQGSQVNGGTAQMNGQGPVSTLPTAARWEPKQT PMVPSADRQTARPPKAAASSRAPAPSASSTSSGGAAGSIQSAPAGYYTLQLSSASQPATLNAYARQQQLSHYWVYQTRRD GKPWYVLVNGVYPSLSQAKNAVAKLPADVQAKKPWARQIGQVKKDQNN
Specific function: Directly or indirectly interferes with cell division [H]
COG id: COG3266
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789790, Length=354, Percent_Identity=35.5932203389831, Blast_Score=134, Evalue=8e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007730 [H]
Pfam domain/function: PF05036 SPOR [H]
EC number: NA
Molecular weight: Translated: 30375; Mature: 30375
Theoretical pI: Translated: 10.74; Mature: 10.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEFKSEDELRPDSSDRRPPRQRKRPTVPKVPVSRQHLMIGIGILVLLLLVISIGSALKS CCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC PSRTDSGHQGADNNGQRNIDLSGSDAGPSSPGATAPTANNAQNGAPVTTPSGQQRVELPG CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC NMADALSQQGSQVNGGTAQMNGQGPVSTLPTAARWEPKQTPMVPSADRQTARPPKAAASS HHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC RAPAPSASSTSSGGAAGSIQSAPAGYYTLQLSSASQPATLNAYARQQQLSHYWVYQTRRD CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHEEEEEECCC GKPWYVLVNGVYPSLSQAKNAVAKLPADVQAKKPWARQIGQVKKDQNN CCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MDEFKSEDELRPDSSDRRPPRQRKRPTVPKVPVSRQHLMIGIGILVLLLLVISIGSALKS CCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC PSRTDSGHQGADNNGQRNIDLSGSDAGPSSPGATAPTANNAQNGAPVTTPSGQQRVELPG CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC NMADALSQQGSQVNGGTAQMNGQGPVSTLPTAARWEPKQTPMVPSADRQTARPPKAAASS HHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC RAPAPSASSTSSGGAAGSIQSAPAGYYTLQLSSASQPATLNAYARQQQLSHYWVYQTRRD CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHEEEEEECCC GKPWYVLVNGVYPSLSQAKNAVAKLPADVQAKKPWARQIGQVKKDQNN CCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA