| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is dam [H]
Identifier: 85060284
GI number: 85060284
Start: 3964934
End: 3965746
Strand: Reverse
Name: dam [H]
Synonym: SG2306
Alternate gene names: 85060284
Gene position: 3965746-3964934 (Counterclockwise)
Preceding gene: 85060285
Following gene: 85060283
Centisome position: 95.08
GC content: 53.75
Gene sequence:
>813_bases ATGAAGAAGAACCGCGCATTTTTGAAATGGGCCGGCGGCAAGTATCCGCTGATTGAGGATATTCGCCGTCACCTGCCGGA GGGTGATTGTTTAATAGAGCCTTTTGTCGGCGCCGGTTCGGTGTTTCTCAATACCGATTACGACCGATACATCCTCGCCG ATATCAACAGTGATCTCATCAATCTGTTCAATATCGTTAAAGAGCGCCCGAACGATTTTATCCGCGATGCCCGGGCTTTA TTTGCCGCCGACGCCAACATCTCTGAGGTGTACTACCTGCTGCGCAGCGAGTTTAATCTCTGCACGGACGCCCATCGGCG CGCAGTGCTGTTTCTATATCTCAACCGGCATTGCTACAACGGTCTGTGCCGATATAACCTGAGAGGTGAGTTCAACGTTC CTTTCGGCCGCTATAAAAAGCCGTACTTTCCGGAGTTGGAACTGCACCGGTTCGCCGAGAAGGCCAGTCGGGCGATGTTT GTTTGCGAGCACTACCAACAAACGCTATCCCGCGCCGTACCGGGTTCGGTGGTATATTGTGATCCGCCTTATGTGCCGCT CTCGACCACCGCAAACTTTACGGCATACCATACCAACAGTTTTAGTCTGACCGAGCAGAAGAACCTGGCGCGCCTCGCCA GCAAGCTGGCTCGTGAAAGCCGGATACCGGTTCTGATTTCCAATCACGATACCGCGCTGACCCGGCAATGGTATGGCGAT GCGGTGCTGCATCATGTCACGGCACGCCGCACCATCAGCAGCAATATTTTCGGGCGCAGCAGCGTGAATGAACTGCTGGC GTTATATCTCTGA
Upstream 100 bases:
>100_bases AGGACCAAAATAATTAAGCGTTCCTGAAGATAGCACTGTAGCGTTATGGTAAACAGGGTACAATCCGCGGTTCTGAAGAG TGTGAGTAAGTAGCGAAGGC
Downstream 100 bases:
>100_bases GCGGGGCCGCCCCGCCGCAGACTGACCGTAACTGACGGGAGACATGGATGAAAAACTATTTAATCGCTCCTTCCATCCTT TCCGCGGATTTTGCCCGCCT
Product: DNA adenine methylase
Products: NA
Alternate protein names: DNA adenine methyltransferase; Deoxyadenosyl-methyltransferase; M.SmaII [H]
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MKKNRAFLKWAGGKYPLIEDIRRHLPEGDCLIEPFVGAGSVFLNTDYDRYILADINSDLINLFNIVKERPNDFIRDARAL FAADANISEVYYLLRSEFNLCTDAHRRAVLFLYLNRHCYNGLCRYNLRGEFNVPFGRYKKPYFPELELHRFAEKASRAMF VCEHYQQTLSRAVPGSVVYCDPPYVPLSTTANFTAYHTNSFSLTEQKNLARLASKLARESRIPVLISNHDTALTRQWYGD AVLHHVTARRTISSNIFGRSSVNELLALYL
Sequences:
>Translated_270_residues MKKNRAFLKWAGGKYPLIEDIRRHLPEGDCLIEPFVGAGSVFLNTDYDRYILADINSDLINLFNIVKERPNDFIRDARAL FAADANISEVYYLLRSEFNLCTDAHRRAVLFLYLNRHCYNGLCRYNLRGEFNVPFGRYKKPYFPELELHRFAEKASRAMF VCEHYQQTLSRAVPGSVVYCDPPYVPLSTTANFTAYHTNSFSLTEQKNLARLASKLARESRIPVLISNHDTALTRQWYGD AVLHHVTARRTISSNIFGRSSVNELLALYL >Mature_270_residues MKKNRAFLKWAGGKYPLIEDIRRHLPEGDCLIEPFVGAGSVFLNTDYDRYILADINSDLINLFNIVKERPNDFIRDARAL FAADANISEVYYLLRSEFNLCTDAHRRAVLFLYLNRHCYNGLCRYNLRGEFNVPFGRYKKPYFPELELHRFAEKASRAMF VCEHYQQTLSRAVPGSVVYCDPPYVPLSTTANFTAYHTNSFSLTEQKNLARLASKLARESRIPVLISNHDTALTRQWYGD AVLHHVTARRTISSNIFGRSSVNELLALYL
Specific function: Methylates DNA within the sequence GATC. Directly involved in methyl-directed DNA mismatch repair [H]
COG id: COG0338
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1789789, Length=269, Percent_Identity=69.8884758364312, Blast_Score=391, Evalue=1e-110,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023095 - InterPro: IPR002052 - InterPro: IPR012327 [H]
Pfam domain/function: PF02086 MethyltransfD12 [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 31144; Mature: 31144
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNRAFLKWAGGKYPLIEDIRRHLPEGDCLIEPFVGAGSVFLNTDYDRYILADINSDLI CCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEECCCCCCEEEEECCCCCEEEEECCHHHH NLFNIVKERPNDFIRDARALFAADANISEVYYLLRSEFNLCTDAHRRAVLFLYLNRHCYN HHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHEEEEEEECHHHHC GLCRYNLRGEFNVPFGRYKKPYFPELELHRFAEKASRAMFVCEHYQQTLSRAVPGSVVYC CEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE DPPYVPLSTTANFTAYHTNSFSLTEQKNLARLASKLARESRIPVLISNHDTALTRQWYGD CCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHH AVLHHVTARRTISSNIFGRSSVNELLALYL HHHHHHHHHHHHHHCCCCCHHHHHHHHHCC >Mature Secondary Structure MKKNRAFLKWAGGKYPLIEDIRRHLPEGDCLIEPFVGAGSVFLNTDYDRYILADINSDLI CCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEECCCCCCEEEEECCCCCEEEEECCHHHH NLFNIVKERPNDFIRDARALFAADANISEVYYLLRSEFNLCTDAHRRAVLFLYLNRHCYN HHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHEEEEEEECHHHHC GLCRYNLRGEFNVPFGRYKKPYFPELELHRFAEKASRAMFVCEHYQQTLSRAVPGSVVYC CEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE DPPYVPLSTTANFTAYHTNSFSLTEQKNLARLASKLARESRIPVLISNHDTALTRQWYGD CCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHH AVLHHVTARRTISSNIFGRSSVNELLALYL HHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10383952 [H]