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The map label for this gene is yibN [H]

Identifier: 85060165

GI number: 85060165

Start: 3802672

End: 3803103

Strand: Reverse

Name: yibN [H]

Synonym: SG2187

Alternate gene names: 85060165

Gene position: 3803103-3802672 (Counterclockwise)

Preceding gene: 85060177

Following gene: 85060164

Centisome position: 91.18

GC content: 52.08

Gene sequence:

>432_bases
ATGCAAGAAATTATGCAATTTGTCGGCAATCATCCCATGCTTAGTCTGGCGTGGGTGGTCATTTTGGGTGCCGTAATTTT
TACCACTTTCCAAAGCCGTTTTTCCAAGGTGGGCGACATCGCACGTGGTGAAGCTATCCGCCTGATCAATAAGGAAGATG
CGGTGATTGTTGATCTGCGCAACCGCGATGATTACCGTAAGGGGCATATCGCCAACAGCCTGAGTCTGACGGCGGCAGAC
ATCAAATCCGGCAATCTGGGCGAGCTGGAAAAAGCAAAGGGTAAACCGGTCATCGTGGTCTGCGCCAGCGGCACCAGCTC
GCGCGATCCGGCGCAAAACCTGATCAAAGCCGGCTTTGAACGGGTTTATGTGCTTAAAGAAGGCATATCCGGCTGGAGCG
GGGAAAATTTACCGCTGGTCCGAGGTAAATAA

Upstream 100 bases:

>100_bases
TGACGATGTATCGGTATATAGGGCTGAATTTGCCCGACGGCGAGGGTATACTCGAATGCTTTGACGTTGGGTCATTTATT
AACGGGAGTCTTCTCACCCC

Downstream 100 bases:

>100_bases
CTCTTTTCCATCAAGAAGAGAAAACCATGGCCAATATCAAAATTTATACTAAAGCAACCTGCCCCTATTGTCATCGCGCC
AAAGCGTTAATCACCCGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MQEIMQFVGNHPMLSLAWVVILGAVIFTTFQSRFSKVGDIARGEAIRLINKEDAVIVDLRNRDDYRKGHIANSLSLTAAD
IKSGNLGELEKAKGKPVIVVCASGTSSRDPAQNLIKAGFERVYVLKEGISGWSGENLPLVRGK

Sequences:

>Translated_143_residues
MQEIMQFVGNHPMLSLAWVVILGAVIFTTFQSRFSKVGDIARGEAIRLINKEDAVIVDLRNRDDYRKGHIANSLSLTAAD
IKSGNLGELEKAKGKPVIVVCASGTSSRDPAQNLIKAGFERVYVLKEGISGWSGENLPLVRGK
>Mature_143_residues
MQEIMQFVGNHPMLSLAWVVILGAVIFTTFQSRFSKVGDIARGEAIRLINKEDAVIVDLRNRDDYRKGHIANSLSLTAAD
IKSGNLGELEKAKGKPVIVVCASGTSSRDPAQNLIKAGFERVYVLKEGISGWSGENLPLVRGK

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

Organism=Escherichia coli, GI1790040, Length=143, Percent_Identity=67.1328671328671, Blast_Score=201, Evalue=1e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 15581; Mature: 15581

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEIMQFVGNHPMLSLAWVVILGAVIFTTFQSRFSKVGDIARGEAIRLINKEDAVIVDLR
CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEC
NRDDYRKGHIANSLSLTAADIKSGNLGELEKAKGKPVIVVCASGTSSRDPAQNLIKAGFE
CCCCCCCCCCCCCCEEEEECCCCCCCCCHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHH
RVYVLKEGISGWSGENLPLVRGK
HHHHHHHCCCCCCCCCCCEECCC
>Mature Secondary Structure
MQEIMQFVGNHPMLSLAWVVILGAVIFTTFQSRFSKVGDIARGEAIRLINKEDAVIVDLR
CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEC
NRDDYRKGHIANSLSLTAADIKSGNLGELEKAKGKPVIVVCASGTSSRDPAQNLIKAGFE
CCCCCCCCCCCCCCEEEEECCCCCCCCCHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHH
RVYVLKEGISGWSGENLPLVRGK
HHHHHHHCCCCCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]