| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
Click here to switch to the map view.
The map label for this gene is 85060177
Identifier: 85060177
GI number: 85060177
Start: 3829822
End: 3830796
Strand: Reverse
Name: 85060177
Synonym: SG2199
Alternate gene names: NA
Gene position: 3830796-3829822 (Counterclockwise)
Preceding gene: 85060184
Following gene: 85060165
Centisome position: 91.84
GC content: 58.05
Gene sequence:
>975_bases ATGGCTACACCTGCTTTTATTATTACTATAGATACAGAAGGCGACAATCTCTGGGAAAACCATCGGCATATTACGACCGA GAACGCCCATTATTTGCCGCGTTTCCAGGCACTCTGCGAAAGGTATCGCTTCAAGCCGGTTTATCTCACCAATTATGAAA TGGCGATGGACGATGTGTTTGTCGAATTCGCCCGCGACGCCGTCGCGCGCGGCAACGGGGAAGTCGGTATGCATCTGCAC GCCTGGAACAGCCCGCCGGCCCACGATCTCACCGGCGATGACGGGCGTCATAAGCCTTACCTGATCGAATATCCCGCGGC GGTCATGCGGGAAAAAATACTTTTTATGACCCAACTGCTGGAAGACACATTCCAGACAAAAATGTTGAGCCATCGCGCCG GCCGCTGGGCGTTTGACGAGCGTTATGCCGCGATGCTGCTTGAGCTGGGCTACCAAGTGGATTGCTCCGTCACCCCGCGG GTGGATTGGCGTCGCTCCCCCGGTGCGCCGGTAGGGACGGGCGGCAGCAATTATCGCCATTTCCCCGATCGCGCCTATTT TATCGATCCCGACAATATTGCTCGCCCTGGCGCCTCACGGCTGCTGGAAGTGCCGATGACCACCCGCGACAAGCATGCGC CCTGGGTGAATGCGGTCAGTCAGATGTACGATCGTCTGCGTGGCAAACGGCGCGGTTCCTCGGTGCAATGGCTACGGCCC GCGGGCGGCAATGCCGCGCAAATGTGCCGGGTGGCGGCGCAGAGCCTGGCCGCAGGCAATGATTATGTGGAGTTTATGCT GCATTCATCTGAATTTATGCCGGGCGGCAGCCCGACGTTTAGAGACAAGGCCGCCATTGAGGGATTATATCGCGATTTGG AACAGCTGTTTGACTGGCTGCAAGACCGGGTAACCGGGATGACCCTGGCGCAGTATTATCAGCGCTGTCTGGGGCAGTCG GGGGCGTCGGCATGA
Upstream 100 bases:
>100_bases GCAGGCTCACCGGCAGGGTAGATTATCGCGAACAATCCAGTTTGCGCTGTTCACGGCGGCTGCGTAACATGGATTTCTCT GATTTCAGACTGGATTCGGT
Downstream 100 bases:
>100_bases GAGGCCGCCGCCGGCAGCGTCAGCACCACCGCCAGCGGGAACCAGAACATATTCCAGGCGACGGCGGGGTTGCCGATGAT AAACATCCCCTGGGTGAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Deacetylase; Lipopolysaccharide Biosynthesis Protein; Lipopolysaccharide Core Biosynthesis Protein; Lipopolysaccharide Biosynthesis Protein WalW; Lipopolysaccahride Biosynthesis Protein
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MATPAFIITIDTEGDNLWENHRHITTENAHYLPRFQALCERYRFKPVYLTNYEMAMDDVFVEFARDAVARGNGEVGMHLH AWNSPPAHDLTGDDGRHKPYLIEYPAAVMREKILFMTQLLEDTFQTKMLSHRAGRWAFDERYAAMLLELGYQVDCSVTPR VDWRRSPGAPVGTGGSNYRHFPDRAYFIDPDNIARPGASRLLEVPMTTRDKHAPWVNAVSQMYDRLRGKRRGSSVQWLRP AGGNAAQMCRVAAQSLAAGNDYVEFMLHSSEFMPGGSPTFRDKAAIEGLYRDLEQLFDWLQDRVTGMTLAQYYQRCLGQS GASA
Sequences:
>Translated_324_residues MATPAFIITIDTEGDNLWENHRHITTENAHYLPRFQALCERYRFKPVYLTNYEMAMDDVFVEFARDAVARGNGEVGMHLH AWNSPPAHDLTGDDGRHKPYLIEYPAAVMREKILFMTQLLEDTFQTKMLSHRAGRWAFDERYAAMLLELGYQVDCSVTPR VDWRRSPGAPVGTGGSNYRHFPDRAYFIDPDNIARPGASRLLEVPMTTRDKHAPWVNAVSQMYDRLRGKRRGSSVQWLRP AGGNAAQMCRVAAQSLAAGNDYVEFMLHSSEFMPGGSPTFRDKAAIEGLYRDLEQLFDWLQDRVTGMTLAQYYQRCLGQS GASA >Mature_323_residues ATPAFIITIDTEGDNLWENHRHITTENAHYLPRFQALCERYRFKPVYLTNYEMAMDDVFVEFARDAVARGNGEVGMHLHA WNSPPAHDLTGDDGRHKPYLIEYPAAVMREKILFMTQLLEDTFQTKMLSHRAGRWAFDERYAAMLLELGYQVDCSVTPRV DWRRSPGAPVGTGGSNYRHFPDRAYFIDPDNIARPGASRLLEVPMTTRDKHAPWVNAVSQMYDRLRGKRRGSSVQWLRPA GGNAAQMCRVAAQSLAAGNDYVEFMLHSSEFMPGGSPTFRDKAAIEGLYRDLEQLFDWLQDRVTGMTLAQYYQRCLGQSG ASA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36867; Mature: 36736
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATPAFIITIDTEGDNLWENHRHITTENAHYLPRFQALCERYRFKPVYLTNYEMAMDDVF CCCCEEEEEEECCCCCHHHCCCEECCCCCCCCHHHHHHHHHHCCCCEEEECHHHHHHHHH VEFARDAVARGNGEVGMHLHAWNSPPAHDLTGDDGRHKPYLIEYPAAVMREKILFMTQLL HHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHH EDTFQTKMLSHRAGRWAFDERYAAMLLELGYQVDCSVTPRVDWRRSPGAPVGTGGSNYRH HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCCCCCCCCC FPDRAYFIDPDNIARPGASRLLEVPMTTRDKHAPWVNAVSQMYDRLRGKRRGSSVQWLRP CCCCEEEECCHHHCCCCHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECC AGGNAAQMCRVAAQSLAAGNDYVEFMLHSSEFMPGGSPTFRDKAAIEGLYRDLEQLFDWL CCCCHHHHHHHHHHHHHCCCHHHHHEEHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH QDRVTGMTLAQYYQRCLGQSGASA HHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure ATPAFIITIDTEGDNLWENHRHITTENAHYLPRFQALCERYRFKPVYLTNYEMAMDDVF CCCEEEEEEECCCCCHHHCCCEECCCCCCCCHHHHHHHHHHCCCCEEEECHHHHHHHHH VEFARDAVARGNGEVGMHLHAWNSPPAHDLTGDDGRHKPYLIEYPAAVMREKILFMTQLL HHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHH EDTFQTKMLSHRAGRWAFDERYAAMLLELGYQVDCSVTPRVDWRRSPGAPVGTGGSNYRH HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCCCCCCCCC FPDRAYFIDPDNIARPGASRLLEVPMTTRDKHAPWVNAVSQMYDRLRGKRRGSSVQWLRP CCCCEEEECCHHHCCCCHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECC AGGNAAQMCRVAAQSLAAGNDYVEFMLHSSEFMPGGSPTFRDKAAIEGLYRDLEQLFDWL CCCCHHHHHHHHHHHHHCCCHHHHHEEHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH QDRVTGMTLAQYYQRCLGQSGASA HHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA