| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is yjbB [H]
Identifier: 85060126
GI number: 85060126
Start: 3730231
End: 3731994
Strand: Reverse
Name: yjbB [H]
Synonym: SG2148
Alternate gene names: 85060126
Gene position: 3731994-3730231 (Counterclockwise)
Preceding gene: 85060127
Following gene: 85060124
Centisome position: 89.47
GC content: 58.39
Gene sequence:
>1764_bases TTGCCTGATGCGCGGCCCCATGAACCTCCTTATCAACACAGGGTCGCCGGTAAGGAGCGCCGGTATTCATCTATAATAGG GGGCTTCAAACCGAGTGTTAACGCTGTTACATCTATTGTCCGCCGTGGCGTTGCTGGTATGGGGCACTCATATCGTTCGC ACGGGCATAATGCGTGTCTATGGGCCCGGCTACGGCAGGTGCTCAGCCGCAGCGTAGAGAAGAAAACCATGGCCTTTATG GCCGGCCTCGGCGTGACCGCGCTGGTGCAGAGCAGCAACGCCACCGCCATGCTGGTGACGTCCTTCGTGGCCCAGAAATT GGTGGCGCTGACGCCGGCGCTGGTGATCATTCTCGGCGCCGATGTGGGTACCGCCCTGATGGCGCGAGTGCTGACCTTCG ATCTTTCCTGGCTGTCGCCGCTGCTTATTTTCATTGGTGTCTGCCTGTTCCTCGGTCGTAAACAATCCCGCGTCGGCCAA CTGGGGCGAGTCGCTATCGGTCTGGGTCTGATTCTGCTGGCTCTGGAGCTTATTGTCAGCGCCTCTACGCCCATCACCCA GGCCAACGGCGTCAAAGACCTGTTCTCGTCACTGACCGGCGATGTTCTGCTGGATGCTTTGACCGGGGCGCTGTTTGCTA TTATCAGTTATTCCAGCCTGGCGGCGGTGCTGCTGACCGCGACTCTCTCCGCCACCGATGTCATTTCCTTTAAAGTGGCG CTATGCCTGGCGATCGGGGCGAATCTCGGCAGCGGGATCCTGGCGATGCTCAACGCCAGCGGCCAGAACGCCGAAGGTAA ACGCGTCGCCCTGGGCAGCTTACTGTTCAAACTTATTGGTTGTCTTATCGTGCTACCGTTCGTCTCGCCGCTGGCGGGAT TGCTGGAACGGCTGCCGCTGGCGGATTCAGAACTGGTTATCTATTTCCACGTGTTCTACAACCTGCTTCGTTGCCTGGCC ATGGTGCCCTTCACCGATCCTATGGTGCGTCTGTGCAGCAAGTGGATTGCCGATACGCCGATAGATGATCGGAGTGTGCG TCCACGTCATTTGGATACCAGCGCGCTGGATACGCCGGCGCTGGCGCTGGTCAACGCTGCCCGGGAAGCCCTGCGAATGG GCGATGTGGTGGAGAGTATGCTGCTGCTGCACACCGAAGTGCTGCACGGGCAGGTTGATAAAAACCGCGAGGTACGTCGT CTGGACGACGACGTCGATGTGCTGTATACGGCCATCAAACTCTATCTGGCGCAGATCTCGAAGGAGGATCTGGACGAAGC CGATTCCTGTCGCTGGGCGGAGATTATTGAAATGGCGCTTAATCTTGAGCAGGCGGGGGATATCATCGAACGTATGACGG GAGATATCGCCGCGAAATCGCTTAACGCGCGCCGGGCTTTCTCGGAGCAGGGGATGAAGGAGCTGGATACGCTGCATGAG CAGCTGATGTCGAATTTACGGTTAAGCCTGTCGGTGTTCTTGTCTAACGACATGACCAGCACCCGCCGTCTGCGCCGCGC CAAACACCGCTTTCGTATCACCGACCGCCGTTATGCCCATGCCCATGTGGACCGGTTGCATCAGCAGAATGTGCAGAGCC TGGAGACCAGCTCGCTGCATTTGAGTCTGCTGGGGGATCTGAAACGGGTCAATTCGTTGTTCTGCTCGGTGGCTTATAAC GTGCTGGAGCTGGACGAAGAATCCGAAGATGATGAAGTTCGCGAACGTGACGACAGCCGACCACCGGCCGCCGGCACGTC CTGA
Upstream 100 bases:
>100_bases GTTTTGCTGTTGGTGGATGTTTTGAACCGTTCTGTGGCAGATTGCTATCCAAATGGCGTTCGAATTGGTCTACAGTTAGA GTTATCAACACTATGCGAGG
Downstream 100 bases:
>100_bases CGGCGCTCGCCGCCGAAAAGGCTCAGTCGAACAGCGCGCTGTGCAGGGTTCGCACCACCTGCTCGGCGTCGTGGCCCGGC ACCAGCAGGCAAAGATTATG
Product: putative transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 587; Mature: 586
Protein sequence:
>587_residues MPDARPHEPPYQHRVAGKERRYSSIIGGFKPSVNAVTSIVRRGVAGMGHSYRSHGHNACLWARLRQVLSRSVEKKTMAFM AGLGVTALVQSSNATAMLVTSFVAQKLVALTPALVIILGADVGTALMARVLTFDLSWLSPLLIFIGVCLFLGRKQSRVGQ LGRVAIGLGLILLALELIVSASTPITQANGVKDLFSSLTGDVLLDALTGALFAIISYSSLAAVLLTATLSATDVISFKVA LCLAIGANLGSGILAMLNASGQNAEGKRVALGSLLFKLIGCLIVLPFVSPLAGLLERLPLADSELVIYFHVFYNLLRCLA MVPFTDPMVRLCSKWIADTPIDDRSVRPRHLDTSALDTPALALVNAAREALRMGDVVESMLLLHTEVLHGQVDKNREVRR LDDDVDVLYTAIKLYLAQISKEDLDEADSCRWAEIIEMALNLEQAGDIIERMTGDIAAKSLNARRAFSEQGMKELDTLHE QLMSNLRLSLSVFLSNDMTSTRRLRRAKHRFRITDRRYAHAHVDRLHQQNVQSLETSSLHLSLLGDLKRVNSLFCSVAYN VLELDEESEDDEVRERDDSRPPAAGTS
Sequences:
>Translated_587_residues MPDARPHEPPYQHRVAGKERRYSSIIGGFKPSVNAVTSIVRRGVAGMGHSYRSHGHNACLWARLRQVLSRSVEKKTMAFM AGLGVTALVQSSNATAMLVTSFVAQKLVALTPALVIILGADVGTALMARVLTFDLSWLSPLLIFIGVCLFLGRKQSRVGQ LGRVAIGLGLILLALELIVSASTPITQANGVKDLFSSLTGDVLLDALTGALFAIISYSSLAAVLLTATLSATDVISFKVA LCLAIGANLGSGILAMLNASGQNAEGKRVALGSLLFKLIGCLIVLPFVSPLAGLLERLPLADSELVIYFHVFYNLLRCLA MVPFTDPMVRLCSKWIADTPIDDRSVRPRHLDTSALDTPALALVNAAREALRMGDVVESMLLLHTEVLHGQVDKNREVRR LDDDVDVLYTAIKLYLAQISKEDLDEADSCRWAEIIEMALNLEQAGDIIERMTGDIAAKSLNARRAFSEQGMKELDTLHE QLMSNLRLSLSVFLSNDMTSTRRLRRAKHRFRITDRRYAHAHVDRLHQQNVQSLETSSLHLSLLGDLKRVNSLFCSVAYN VLELDEESEDDEVRERDDSRPPAAGTS >Mature_586_residues PDARPHEPPYQHRVAGKERRYSSIIGGFKPSVNAVTSIVRRGVAGMGHSYRSHGHNACLWARLRQVLSRSVEKKTMAFMA GLGVTALVQSSNATAMLVTSFVAQKLVALTPALVIILGADVGTALMARVLTFDLSWLSPLLIFIGVCLFLGRKQSRVGQL GRVAIGLGLILLALELIVSASTPITQANGVKDLFSSLTGDVLLDALTGALFAIISYSSLAAVLLTATLSATDVISFKVAL CLAIGANLGSGILAMLNASGQNAEGKRVALGSLLFKLIGCLIVLPFVSPLAGLLERLPLADSELVIYFHVFYNLLRCLAM VPFTDPMVRLCSKWIADTPIDDRSVRPRHLDTSALDTPALALVNAAREALRMGDVVESMLLLHTEVLHGQVDKNREVRRL DDDVDVLYTAIKLYLAQISKEDLDEADSCRWAEIIEMALNLEQAGDIIERMTGDIAAKSLNARRAFSEQGMKELDTLHEQ LMSNLRLSLSVFLSNDMTSTRRLRRAKHRFRITDRRYAHAHVDRLHQQNVQSLETSSLHLSLLGDLKRVNSLFCSVAYNV LELDEESEDDEVRERDDSRPPAAGTS
Specific function: Unknown
COG id: COG1283
COG function: function code P; Na+/phosphate symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis yqeW [H]
Homologues:
Organism=Escherichia coli, GI1790451, Length=533, Percent_Identity=71.2945590994372, Blast_Score=707, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003841 - InterPro: IPR004633 [H]
Pfam domain/function: PF02690 Na_Pi_cotrans [H]
EC number: NA
Molecular weight: Translated: 64213; Mature: 64082
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDARPHEPPYQHRVAGKERRYSSIIGGFKPSVNAVTSIVRRGVAGMGHSYRSHGHNACL CCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCHHH WARLRQVLSRSVEKKTMAFMAGLGVTALVQSSNATAMLVTSFVAQKLVALTPALVIILGA HHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC DVGTALMARVLTFDLSWLSPLLIFIGVCLFLGRKQSRVGQLGRVAIGLGLILLALELIVS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ASTPITQANGVKDLFSSLTGDVLLDALTGALFAIISYSSLAAVLLTATLSATDVISFKVA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LCLAIGANLGSGILAMLNASGQNAEGKRVALGSLLFKLIGCLIVLPFVSPLAGLLERLPL HHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ADSELVIYFHVFYNLLRCLAMVPFTDPMVRLCSKWIADTPIDDRSVRPRHLDTSALDTPA CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCHH LALVNAAREALRMGDVVESMLLLHTEVLHGQVDKNREVRRLDDDVDVLYTAIKLYLAQIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHH KEDLDEADSCRWAEIIEMALNLEQAGDIIERMTGDIAAKSLNARRAFSEQGMKELDTLHE HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLMSNLRLSLSVFLSNDMTSTRRLRRAKHRFRITDRRYAHAHVDRLHQQNVQSLETSSLH HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LSLLGDLKRVNSLFCSVAYNVLELDEESEDDEVRERDDSRPPAAGTS HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCC >Mature Secondary Structure PDARPHEPPYQHRVAGKERRYSSIIGGFKPSVNAVTSIVRRGVAGMGHSYRSHGHNACL CCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCHHH WARLRQVLSRSVEKKTMAFMAGLGVTALVQSSNATAMLVTSFVAQKLVALTPALVIILGA HHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC DVGTALMARVLTFDLSWLSPLLIFIGVCLFLGRKQSRVGQLGRVAIGLGLILLALELIVS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ASTPITQANGVKDLFSSLTGDVLLDALTGALFAIISYSSLAAVLLTATLSATDVISFKVA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LCLAIGANLGSGILAMLNASGQNAEGKRVALGSLLFKLIGCLIVLPFVSPLAGLLERLPL HHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ADSELVIYFHVFYNLLRCLAMVPFTDPMVRLCSKWIADTPIDDRSVRPRHLDTSALDTPA CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCHH LALVNAAREALRMGDVVESMLLLHTEVLHGQVDKNREVRRLDDDVDVLYTAIKLYLAQIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHH KEDLDEADSCRWAEIIEMALNLEQAGDIIERMTGDIAAKSLNARRAFSEQGMKELDTLHE HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLMSNLRLSLSVFLSNDMTSTRRLRRAKHRFRITDRRYAHAHVDRLHQQNVQSLETSSLH HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LSLLGDLKRVNSLFCSVAYNVLELDEESEDDEVRERDDSRPPAAGTS HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]