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The map label for this gene is potC [C]

Identifier: 85060127

GI number: 85060127

Start: 3732880

End: 3733662

Strand: Reverse

Name: potC [C]

Synonym: SG2149

Alternate gene names: 85060127

Gene position: 3733662-3732880 (Counterclockwise)

Preceding gene: 85060128

Following gene: 85060126

Centisome position: 89.51

GC content: 54.53

Gene sequence:

>783_bases
GTGCAAGGAGAAAGGGATGAGTCAGGCCGAAATACTCTGGCACCGCGGCGTGGTAGTCATGCTGCTGGTGGTGCTGTTAT
TACCGCTGGCGGTAACGCTGATTTATGCCCTCAGCAGCACCTGGGGGCCACGATTTTACCGCAGGGTTTTGAGATTAACT
GGTTTTTGGATCTGTGGCGCGACCCGCGATTTTTGACCGCCTTGGGCCATTCTCTGCTTATTTGCCTGGGCGCGCTGCTG
CTGCCGATGATTTTTGTTATCGCCTACTTCTTTCCCTGGCTGGACGGGGTGATGAATATCTTCATCCTATTGCCGTTCGC
CGTCCCCCCCATCGTCTCCTCGGTAAAGCTATTGCAACTATATTCCGACGGCCTGCTGGCGCTAACCGGCACCCCCTGGA
TATTAATCGGCTGCTACTTTACCTTGATGCTGCCGTTTATGTACCGCGCCGTGAACAATAACATGCAGGCGATCAACTTG
CGCAGCCTGATGGATGCGGCCCATCTGCTGGGCGCCAGCACCGGACAGGCGGCGCTGTTGGTTATCCTGCCCAATCTGCG
CAAGGGTTGTATGATAGCGATGCTGCTGTCATTTTCCTTTCTTATCGGCAAGTTCGTGTTCGCCAACCTGTTCGTGGGTA
ATCGCTACGAAACCCTGCAGGTCTATCTCTACAACATGCGTAACGGCAGCGGTCACTTCACCAGCGCGCTGGTCATTTCC
TATTTTGTGGTGGTGCTGCTGTTGACATTGCTGGCCAATGCGGTCGGTAAGGAAAAGGAGTGA

Upstream 100 bases:

>100_bases
TGGCCAGCACGTTGGGTATGGTGCTGGTGGCGCTGATGGTGTTGATAACCCTGGTGCATCAACTGCTGGTGCGCCGCCGC
TATATCCGCGCGCTTTAAGC

Downstream 100 bases:

>100_bases
AGATGGCGTATTTAACGGTTAAGTAACTGAACAAACATTGTGGTCCGACCCAGGTGTTCACCAATATCGATTTCAACGCT
GACGAAGGCGAATTTGTCTC

Product: putative spermidine/putrescine ABC transporter permease component

Products: Phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: ABC Transporter Permease; Permease Of ABC Transporter; Transmembrane Component Of ABC Transporter; Polyamine ABC Transporter Permease Protein; ABC Transporter; ABC-Type Transporter Permease Component; ABC Transport System Permease Protein; ABC-Type Transport System Permease Protein; Spermidine/Putrescine ABC Transporter Permease Component; ABC Transporter Inner Membrane Subunit; ABC Transporter Membrane Protein; ABC Transporter Membrane Spanning Protein; ABC Transporter, Permease Component Fragment; ABC Transporter Permease Component

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MQGERDESGRNTLAPRRGSHAAGGAVITAGGNADLCPQQHLGATILPQGFEINWFLDLWRDPRFLTALGHSLLICLGALL
LPMIFVIAYFFPWLDGVMNIFILLPFAVPPIVSSVKLLQLYSDGLLALTGTPWILIGCYFTLMLPFMYRAVNNNMQAINL
RSLMDAAHLLGASTGQAALLVILPNLRKGCMIAMLLSFSFLIGKFVFANLFVGNRYETLQVYLYNMRNGSGHFTSALVIS
YFVVVLLLTLLANAVGKEKE

Sequences:

>Translated_260_residues
MQGERDESGRNTLAPRRGSHAAGGAVITAGGNADLCPQQHLGATILPQGFEINWFLDLWRDPRFLTALGHSLLICLGALL
LPMIFVIAYFFPWLDGVMNIFILLPFAVPPIVSSVKLLQLYSDGLLALTGTPWILIGCYFTLMLPFMYRAVNNNMQAINL
RSLMDAAHLLGASTGQAALLVILPNLRKGCMIAMLLSFSFLIGKFVFANLFVGNRYETLQVYLYNMRNGSGHFTSALVIS
YFVVVLLLTLLANAVGKEKE
>Mature_260_residues
MQGERDESGRNTLAPRRGSHAAGGAVITAGGNADLCPQQHLGATILPQGFEINWFLDLWRDPRFLTALGHSLLICLGALL
LPMIFVIAYFFPWLDGVMNIFILLPFAVPPIVSSVKLLQLYSDGLLALTGTPWILIGCYFTLMLPFMYRAVNNNMQAINL
RSLMDAAHLLGASTGQAALLVILPNLRKGCMIAMLLSFSFLIGKFVFANLFVGNRYETLQVYLYNMRNGSGHFTSALVIS
YFVVVLLLTLLANAVGKEKE

Specific function: Required For The Activity Of The Bacterial Periplasmic Transport System Of Putrescine And Spermidine. [C]

COG id: COG1177

COG function: function code E; ABC-type spermidine/putrescine transport system, permease component II

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28572; Mature: 28572

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGERDESGRNTLAPRRGSHAAGGAVITAGGNADLCPQQHLGATILPQGFEINWFLDLWR
CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHCCCEECCCCCEEEEEHCCCC
DPRFLTALGHSLLICLGALLLPMIFVIAYFFPWLDGVMNIFILLPFAVPPIVSSVKLLQL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YSDGLLALTGTPWILIGCYFTLMLPFMYRAVNNNMQAINLRSLMDAAHLLGASTGQAALL
HCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCCEEEE
VILPNLRKGCMIAMLLSFSFLIGKFVFANLFVGNRYETLQVYLYNMRNGSGHFTSALVIS
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHH
YFVVVLLLTLLANAVGKEKE
HHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQGERDESGRNTLAPRRGSHAAGGAVITAGGNADLCPQQHLGATILPQGFEINWFLDLWR
CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHCCCEECCCCCEEEEEHCCCC
DPRFLTALGHSLLICLGALLLPMIFVIAYFFPWLDGVMNIFILLPFAVPPIVSSVKLLQL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YSDGLLALTGTPWILIGCYFTLMLPFMYRAVNNNMQAINLRSLMDAAHLLGASTGQAALL
HCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCCEEEE
VILPNLRKGCMIAMLLSFSFLIGKFVFANLFVGNRYETLQVYLYNMRNGSGHFTSALVIS
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHH
YFVVVLLLTLLANAVGKEKE
HHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA