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The map label for this gene is recJ [H]

Identifier: 85059969

GI number: 85059969

Start: 3447011

End: 3448747

Strand: Reverse

Name: recJ [H]

Synonym: SG1991

Alternate gene names: 85059969

Gene position: 3448747-3447011 (Counterclockwise)

Preceding gene: 85059970

Following gene: 85059968

Centisome position: 82.68

GC content: 62.18

Gene sequence:

>1737_bases
GTGAATATGACAACGGAATTGCGTCGGCGTCCGCTGAGCGATAGCGCTGTTCTGGCTGAGGCGGATATCCCGCCGCTGCT
GAAACGATTGTATGTGCAACGTGGCGTCTGTGCGGTCGGTGAGCTGGAGCGGGGGGTGCGCGGGTTGCTGGCTTATCATA
CCCTGACCGGCATCGAGCAGGCGGTGGATCTGCTGATCCGCGCCCTAGCGGATCAGCGCAGAATAATGGTGGTCGGCGAC
TTCGACGCGGACGGCGCGACCAGCACCGCGCTTACGGTGTTGGCGCTGCGGCAAATGGGCGCACAGACGATAGATTTCCT
GGTGCCGAATCGCTTTGAAGATGGCTACGGCCTTAGCCCAGAGGTGGTGGAGCAGGCGGCGGCGCGCGGCGCGCAGCTTA
TCCTGACCGTGGATAATGGTATCTCTTCCCATGCCGGCGTCACCCTGGCGCATGAGAAAGGCATCCCGGTGCTCATCACT
GATCATCATCTCCCTGGCGACACCCTGCCGGCCGCTGAGGCCATCGTTAATCCCAATTTACGCGATTGCACCTTCGCCTC
GAAATCCCTGGCGGGTGTCGGAGTGGCGTTTTATCTGATGCTGGCGCTGCGCGCACGGCTCAACGACAGCGGCTGGTTTA
CACAGCGGGGCATAGCTGCCCCCAAACTGGCTGAACTGCTGGACCTGGTGGCGCTGGGTACTGTGGCGGACGTGGTGCCG
CTGGACGCCAATAACCGTATCCTAGTGCATCAGGGGCTAAGCCGCATTCGCGCCGGCCGTTGCCGTCCCGGCATCCGCGC
CCTGGCGGAGGTGGCCAACCGCGATATTACCCGGCTGTGCGCCAGCGACCTGGGTTTTGCGCTGGGACCGCGCCTCAACG
CCGCCGGGCGGTTGGACGATATGTCGGTCGGAGTCGCGTTGCTGCTGAGCGAGGATCTGCCGCAGGCGCGCATGCTGGCG
GCGGAGCTCGATGCCCTCAATCAAACCCGGCGTGAAATCGAACATGGAATGGAAGCGGAAGCGCTGGCGCTGTGCCAGTC
AATGGCGCGCGACGAGCAGGCGATGCCCTTCGGGCTGGCTATCTACCATGAGCAATGGCATCAGGGGGTGGTGGGTATTC
TGGCGTCGCGGATTAAAGAGCGTTTTCACCGGCCGGTTATTGCTTTTGCGCCAGCGGGTGAGGGAGTACTGAAAGGATCA
GGACGGTCGGTAGCCGGTTTGCACATGCGCGATCTGCTTGAGCGGCTGGACACCTTGCATCCCGGTATGATACTGAAATT
TGGCGGCCACGCCATGGCGGCCGGCCTGACGCTGGAGCATGCGCAGTTCGAGCGTTTTCGCCAGCGTTTCGCCGAATTGG
TGGATGAGTGGCTCGATCCCGCGATGCTCGAAGGCGTGATCTGGTCGGACGGCGAGCTGGCCGGCCAGGAGTTGTCGTTG
ACCACCGCCGAGCTGCTGCGTGACGGCGGTCCCTGGGGGCAGGGGTTTCCGGATCCGCTGTTTGACGGGCGGTTTCGCGT
GCTCAATCAGCGTTTGGTGGGAGAGAAACACCTGAAACTGCTGCTCGAACCCGTGGCGGGAGGCCCCATGCTGGATGGTA
TCGCTTTCAATATCGACTCGCGCCTATGGCCGGATAATAGCGTGCATACCGTCGAGTTGGCCTACAGGCTGGAGGTTAAC
GAGTTTCGCGGTAACCGCTCCCTGCAGCTTTTAATACAGCATATTTGGCCGCTGTAG

Upstream 100 bases:

>100_bases
GATAACGGTACCCTCATCCCGGGCTATCAAAGCCCGAAAGAGCTGGCCGCTATCCTGGATCAGCAAGGATCGGGTCAGGC
AACGGGCGGTTAACACGGCA

Downstream 100 bases:

>100_bases
CCCACCGCCGCCCGCCGTCGCCAATCCGATGGCGACGGCTACTACCTTCCGCGGCGCGGATCCGTTACAATAGTGGGTTA
ACACGCATTCCTTCTCGTCA

Product: ssDNA exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 578; Mature: 578

Protein sequence:

>578_residues
MNMTTELRRRPLSDSAVLAEADIPPLLKRLYVQRGVCAVGELERGVRGLLAYHTLTGIEQAVDLLIRALADQRRIMVVGD
FDADGATSTALTVLALRQMGAQTIDFLVPNRFEDGYGLSPEVVEQAAARGAQLILTVDNGISSHAGVTLAHEKGIPVLIT
DHHLPGDTLPAAEAIVNPNLRDCTFASKSLAGVGVAFYLMLALRARLNDSGWFTQRGIAAPKLAELLDLVALGTVADVVP
LDANNRILVHQGLSRIRAGRCRPGIRALAEVANRDITRLCASDLGFALGPRLNAAGRLDDMSVGVALLLSEDLPQARMLA
AELDALNQTRREIEHGMEAEALALCQSMARDEQAMPFGLAIYHEQWHQGVVGILASRIKERFHRPVIAFAPAGEGVLKGS
GRSVAGLHMRDLLERLDTLHPGMILKFGGHAMAAGLTLEHAQFERFRQRFAELVDEWLDPAMLEGVIWSDGELAGQELSL
TTAELLRDGGPWGQGFPDPLFDGRFRVLNQRLVGEKHLKLLLEPVAGGPMLDGIAFNIDSRLWPDNSVHTVELAYRLEVN
EFRGNRSLQLLIQHIWPL

Sequences:

>Translated_578_residues
MNMTTELRRRPLSDSAVLAEADIPPLLKRLYVQRGVCAVGELERGVRGLLAYHTLTGIEQAVDLLIRALADQRRIMVVGD
FDADGATSTALTVLALRQMGAQTIDFLVPNRFEDGYGLSPEVVEQAAARGAQLILTVDNGISSHAGVTLAHEKGIPVLIT
DHHLPGDTLPAAEAIVNPNLRDCTFASKSLAGVGVAFYLMLALRARLNDSGWFTQRGIAAPKLAELLDLVALGTVADVVP
LDANNRILVHQGLSRIRAGRCRPGIRALAEVANRDITRLCASDLGFALGPRLNAAGRLDDMSVGVALLLSEDLPQARMLA
AELDALNQTRREIEHGMEAEALALCQSMARDEQAMPFGLAIYHEQWHQGVVGILASRIKERFHRPVIAFAPAGEGVLKGS
GRSVAGLHMRDLLERLDTLHPGMILKFGGHAMAAGLTLEHAQFERFRQRFAELVDEWLDPAMLEGVIWSDGELAGQELSL
TTAELLRDGGPWGQGFPDPLFDGRFRVLNQRLVGEKHLKLLLEPVAGGPMLDGIAFNIDSRLWPDNSVHTVELAYRLEVN
EFRGNRSLQLLIQHIWPL
>Mature_578_residues
MNMTTELRRRPLSDSAVLAEADIPPLLKRLYVQRGVCAVGELERGVRGLLAYHTLTGIEQAVDLLIRALADQRRIMVVGD
FDADGATSTALTVLALRQMGAQTIDFLVPNRFEDGYGLSPEVVEQAAARGAQLILTVDNGISSHAGVTLAHEKGIPVLIT
DHHLPGDTLPAAEAIVNPNLRDCTFASKSLAGVGVAFYLMLALRARLNDSGWFTQRGIAAPKLAELLDLVALGTVADVVP
LDANNRILVHQGLSRIRAGRCRPGIRALAEVANRDITRLCASDLGFALGPRLNAAGRLDDMSVGVALLLSEDLPQARMLA
AELDALNQTRREIEHGMEAEALALCQSMARDEQAMPFGLAIYHEQWHQGVVGILASRIKERFHRPVIAFAPAGEGVLKGS
GRSVAGLHMRDLLERLDTLHPGMILKFGGHAMAAGLTLEHAQFERFRQRFAELVDEWLDPAMLEGVIWSDGELAGQELSL
TTAELLRDGGPWGQGFPDPLFDGRFRVLNQRLVGEKHLKLLLEPVAGGPMLDGIAFNIDSRLWPDNSVHTVELAYRLEVN
EFRGNRSLQLLIQHIWPL

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=578, Percent_Identity=71.1072664359862, Blast_Score=853, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 63060; Mature: 63060

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMTTELRRRPLSDSAVLAEADIPPLLKRLYVQRGVCAVGELERGVRGLLAYHTLTGIEQ
CCCCHHHHHCCCCCCCEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AVDLLIRALADQRRIMVVGDFDADGATSTALTVLALRQMGAQTIDFLVPNRFEDGYGLSP
HHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCH
EVVEQAAARGAQLILTVDNGISSHAGVTLAHEKGIPVLITDHHLPGDTLPAAEAIVNPNL
HHHHHHHCCCCEEEEEECCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCHHHHHCCCCC
RDCTFASKSLAGVGVAFYLMLALRARLNDSGWFTQRGIAAPKLAELLDLVALGTVADVVP
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEE
LDANNRILVHQGLSRIRAGRCRPGIRALAEVANRDITRLCASDLGFALGPRLNAAGRLDD
CCCCCEEEHHHCHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCCHHCCCCCCCCCCCCH
MSVGVALLLSEDLPQARMLAAELDALNQTRREIEHGMEAEALALCQSMARDEQAMPFGLA
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHH
IYHEQWHQGVVGILASRIKERFHRPVIAFAPAGEGVLKGSGRSVAGLHMRDLLERLDTLH
HHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEECCCCCEEHHHHHHHHHHHHHCC
PGMILKFGGHAMAAGLTLEHAQFERFRQRFAELVDEWLDPAMLEGVIWSDGELAGQELSL
CCEEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEECCCCCCCCCHHH
TTAELLRDGGPWGQGFPDPLFDGRFRVLNQRLVGEKHLKLLLEPVAGGPMLDGIAFNIDS
HHHHHHHCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCC
RLWPDNSVHTVELAYRLEVNEFRGNRSLQLLIQHIWPL
CCCCCCCEEEEEEEEEEEHHHHCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MNMTTELRRRPLSDSAVLAEADIPPLLKRLYVQRGVCAVGELERGVRGLLAYHTLTGIEQ
CCCCHHHHHCCCCCCCEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AVDLLIRALADQRRIMVVGDFDADGATSTALTVLALRQMGAQTIDFLVPNRFEDGYGLSP
HHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCH
EVVEQAAARGAQLILTVDNGISSHAGVTLAHEKGIPVLITDHHLPGDTLPAAEAIVNPNL
HHHHHHHCCCCEEEEEECCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCHHHHHCCCCC
RDCTFASKSLAGVGVAFYLMLALRARLNDSGWFTQRGIAAPKLAELLDLVALGTVADVVP
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEE
LDANNRILVHQGLSRIRAGRCRPGIRALAEVANRDITRLCASDLGFALGPRLNAAGRLDD
CCCCCEEEHHHCHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCCHHCCCCCCCCCCCCH
MSVGVALLLSEDLPQARMLAAELDALNQTRREIEHGMEAEALALCQSMARDEQAMPFGLA
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHH
IYHEQWHQGVVGILASRIKERFHRPVIAFAPAGEGVLKGSGRSVAGLHMRDLLERLDTLH
HHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEECCCCCEEHHHHHHHHHHHHHCC
PGMILKFGGHAMAAGLTLEHAQFERFRQRFAELVDEWLDPAMLEGVIWSDGELAGQELSL
CCEEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEECCCCCCCCCHHH
TTAELLRDGGPWGQGFPDPLFDGRFRVLNQRLVGEKHLKLLLEPVAGGPMLDGIAFNIDS
HHHHHHHCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCC
RLWPDNSVHTVELAYRLEVNEFRGNRSLQLLIQHIWPL
CCCCCCCEEEEEEEEEEEHHHHCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8168497 [H]