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The map label for this gene is rseB

Identifier: 85059769

GI number: 85059769

Start: 3056087

End: 3057055

Strand: Reverse

Name: rseB

Synonym: SG1791

Alternate gene names: 85059769

Gene position: 3057055-3056087 (Counterclockwise)

Preceding gene: 85059770

Following gene: 85059768

Centisome position: 73.29

GC content: 58.93

Gene sequence:

>969_bases
ATGAAGCAACTTTGGTATGCCGTGTGTTTGTTGACGGGCAGCCTGCTCTATTCCATCCACGCGCCGGCTCAGACCACCTC
ATCCGGCGCGTTGCTCGCGCAAATGAGTCAGGCCAGCCAGACGCTGGACTATGAATATGCATACGTGCTGGTCAGCAAGC
TGGGCGTCGACTCGCTGCGCTACCGCCACGTGGTTATCGATAAACAACGGTTGGCGCAGCTGCTGCAAATGGACGGTCCG
CGCCGCGAGATTGTCCAGCGTAACGGCGAGATCAGCTATTTCGAGCCCGGCCTGGAGCCTTTTACCCTTCTGGGCGATCA
CATCGTTGATTCTCTTCCCTCGATTGTCTACGCCAATTTTGAACGCTTGGCGCACTTCTACGATTTTATTCCTGTGGGCC
GCGCCCGTATTGCCGATCGTCTGTGCGAGGTGGTGCGGGTTGTCGCGCGCGACGGCACCTGGTTCAGTTATATCGTCTGG
ATTGATACCGCCACTAAACTCCCGCTGCGCGTCGATCTGCTGGATCGCGATGGCGAAGCGCTGGAACAGTTTCGCGTCAT
CGCATTTAACGTCGATAAGCAGGTCGAAAACAGCATGGCCGGGTTGGAAAAGGTGACCTTGCCGCCCCAGCTGGCGTTGC
CGGCCTCCACCACCGCCAATTTCGACTGGCGCGTTAACTGGTTGCCGGTGGGCGTGTCCGAAGCCTCCCGCAGCCGTCGT
ACGCTGCCTGGCATCAATGAACCGATTGAGGCCAGGCTGTATACAGATGGCTTGTTCAGCTTTTCGGTGAACGTCGGCCA
GGCGAATACCGTCACTAATTCCGGCAATAGGGAACGTCTCATTCGCACCGGGCGACGTACTATCCATACCGAACAGCGCG
GCAACCGGGAAATCACCGTCGTGGGCGAACTGCCGCCGGCCACGGCGAAGCGTATCGCCGACGGCGTCGTTTTCCAGGCG
CAGCCATGA

Upstream 100 bases:

>100_bases
GTCGCCTGCATGCTGATACTCTACAGTTCGATCAGCAAGACGCGCAGCAGGCCGCCGTGCCGGTGCCGGGCACGCAATCA
TTAGGAATGCAGCCGCAGTA

Downstream 100 bases:

>100_bases
TTAAAGAATGGGCTACGGTCGTCACCTGGCAGCAGGGCATTGCGCAGGTGCGCTGCGAGACGCGTGAAGGGTGCAGCAGT
TGCCACGCCCGGCAAAGCTG

Product: periplasmic negative regulator of sigmaE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MKQLWYAVCLLTGSLLYSIHAPAQTTSSGALLAQMSQASQTLDYEYAYVLVSKLGVDSLRYRHVVIDKQRLAQLLQMDGP
RREIVQRNGEISYFEPGLEPFTLLGDHIVDSLPSIVYANFERLAHFYDFIPVGRARIADRLCEVVRVVARDGTWFSYIVW
IDTATKLPLRVDLLDRDGEALEQFRVIAFNVDKQVENSMAGLEKVTLPPQLALPASTTANFDWRVNWLPVGVSEASRSRR
TLPGINEPIEARLYTDGLFSFSVNVGQANTVTNSGNRERLIRTGRRTIHTEQRGNREITVVGELPPATAKRIADGVVFQA
QP

Sequences:

>Translated_322_residues
MKQLWYAVCLLTGSLLYSIHAPAQTTSSGALLAQMSQASQTLDYEYAYVLVSKLGVDSLRYRHVVIDKQRLAQLLQMDGP
RREIVQRNGEISYFEPGLEPFTLLGDHIVDSLPSIVYANFERLAHFYDFIPVGRARIADRLCEVVRVVARDGTWFSYIVW
IDTATKLPLRVDLLDRDGEALEQFRVIAFNVDKQVENSMAGLEKVTLPPQLALPASTTANFDWRVNWLPVGVSEASRSRR
TLPGINEPIEARLYTDGLFSFSVNVGQANTVTNSGNRERLIRTGRRTIHTEQRGNREITVVGELPPATAKRIADGVVFQA
QP
>Mature_322_residues
MKQLWYAVCLLTGSLLYSIHAPAQTTSSGALLAQMSQASQTLDYEYAYVLVSKLGVDSLRYRHVVIDKQRLAQLLQMDGP
RREIVQRNGEISYFEPGLEPFTLLGDHIVDSLPSIVYANFERLAHFYDFIPVGRARIADRLCEVVRVVARDGTWFSYIVW
IDTATKLPLRVDLLDRDGEALEQFRVIAFNVDKQVENSMAGLEKVTLPPQLALPASTTANFDWRVNWLPVGVSEASRSRR
TLPGINEPIEARLYTDGLFSFSVNVGQANTVTNSGNRERLIRTGRRTIHTEQRGNREITVVGELPPATAKRIADGVVFQA
QP

Specific function: Seems to modulate the activity of rpoE (sigma-E) [H]

COG id: COG3026

COG function: function code T; Negative regulator of sigma E activity

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseB family [H]

Homologues:

Organism=Escherichia coli, GI1788924, Length=321, Percent_Identity=63.8629283489097, Blast_Score=422, Evalue=1e-119,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005588 [H]

Pfam domain/function: PF03888 MucB_RseB [H]

EC number: NA

Molecular weight: Translated: 36134; Mature: 36134

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQLWYAVCLLTGSLLYSIHAPAQTTSSGALLAQMSQASQTLDYEYAYVLVSKLGVDSLR
CCHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHH
YRHVVIDKQRLAQLLQMDGPRREIVQRNGEISYFEPGLEPFTLLGDHIVDSLPSIVYANF
HEEEEECHHHHHHHHHCCCCHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
ERLAHFYDFIPVGRARIADRLCEVVRVVARDGTWFSYIVWIDTATKLPLRVDLLDRDGEA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEEECCCCHH
LEQFRVIAFNVDKQVENSMAGLEKVTLPPQLALPASTTANFDWRVNWLPVGVSEASRSRR
HHHEEEEEEECCHHHHHHHHCCEEECCCCCCCCCCCCCCCCEEEEEEEEECHHHHHHCCC
TLPGINEPIEARLYTDGLFSFSVNVGQANTVTNSGNRERLIRTGRRTIHTEQRGNREITV
CCCCCCCCCEEEEEECCEEEEEEECCCCCCCCCCCCHHHHHHHCCHHEEHHCCCCEEEEE
VGELPPATAKRIADGVVFQAQP
EECCCCHHHHHHHCCEEEEECC
>Mature Secondary Structure
MKQLWYAVCLLTGSLLYSIHAPAQTTSSGALLAQMSQASQTLDYEYAYVLVSKLGVDSLR
CCHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHH
YRHVVIDKQRLAQLLQMDGPRREIVQRNGEISYFEPGLEPFTLLGDHIVDSLPSIVYANF
HEEEEECHHHHHHHHHCCCCHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
ERLAHFYDFIPVGRARIADRLCEVVRVVARDGTWFSYIVWIDTATKLPLRVDLLDRDGEA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEEECCCCHH
LEQFRVIAFNVDKQVENSMAGLEKVTLPPQLALPASTTANFDWRVNWLPVGVSEASRSRR
HHHEEEEEEECCHHHHHHHHCCEEECCCCCCCCCCCCCCCCEEEEEEEEECHHHHHHCCC
TLPGINEPIEARLYTDGLFSFSVNVGQANTVTNSGNRERLIRTGRRTIHTEQRGNREITV
CCCCCCCCCEEEEEECCEEEEEEECCCCCCCCCCCCHHHHHHHCCHHEEHHCCCCEEEEE
VGELPPATAKRIADGVVFQAQP
EECCCCHHHHHHHCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]