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The map label for this gene is rseA [H]

Identifier: 85059770

GI number: 85059770

Start: 3057055

End: 3057750

Strand: Reverse

Name: rseA [H]

Synonym: SG1792

Alternate gene names: 85059770

Gene position: 3057750-3057055 (Counterclockwise)

Preceding gene: 85059771

Following gene: 85059769

Centisome position: 73.31

GC content: 59.63

Gene sequence:

>696_bases
ATGCACAATGAAAAGCTTTCCGCTCTGATGGATGGGGAATCGTTTGACAGCGAACTGTTTAACGATTTGTCCAGGGATGT
TAAGTTGCAGCAAAGCTGGCAACGGTATCACCTCATTCGCGACGTAATGCGCGGTGACGCGAGCGAAGTTCTTCACCTCG
ATATTGCCGATCGTGTGGCCGCCGCCATTGCCGAAGAGCCGGTGCGTATCGCGCCGCAGGCCGTAACGGAATCGCAGCCG
ACGCCGGACGCCTGGCACCGCTCACCGTTCTGGCGCAAGGCACGGCCCTTTACCTCGCGCGTTGCCCGGTTAGGCGTCGC
GTCACACCTTACCCAAATCGGCGTCGCGGCCTGCGTCTCACTGGCGGTTATCGTCTGCGTGCAGCATTACAATACCCAGC
AGGGCGTCGGTCAGGACAGCAGTCAGCCAGAAAACCCCGTATTCAATACTTTGCCGATGATGGGCCAGGCGTCGCCGGTC
AGTCTTGGCGTCCCTTCGGCCAACGGCGCCGGGGTGGATAACGGCAATCAGGAGATGCAGGTTCAGGAACAGCGCAGGCG
CATCAACGCCATTTTGCAGGACTATGAGCTGCAGCGTCGCCTGCATGCTGATACTCTACAGTTCGATCAGCAAGACGCGC
AGCAGGCCGCCGTGCCGGTGCCGGGCACGCAATCATTAGGAATGCAGCCGCAGTAA

Upstream 100 bases:

>100_bases
GGAACGGTACGCTCACGTATTTTCCGTGCGCGCGAAGCAATTGACAATAAAATTCAACCACTTATTCAGCGTTAACGGCG
GCAGGAGAAGGTACCCAGGC

Downstream 100 bases:

>100_bases
TGAAGCAACTTTGGTATGCCGTGTGTTTGTTGACGGGCAGCCTGCTCTATTCCATCCACGCGCCGGCTCAGACCACCTCA
TCCGGCGCGTTGCTCGCGCA

Product: anti-RNA polymerase sigma factor SigE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MHNEKLSALMDGESFDSELFNDLSRDVKLQQSWQRYHLIRDVMRGDASEVLHLDIADRVAAAIAEEPVRIAPQAVTESQP
TPDAWHRSPFWRKARPFTSRVARLGVASHLTQIGVAACVSLAVIVCVQHYNTQQGVGQDSSQPENPVFNTLPMMGQASPV
SLGVPSANGAGVDNGNQEMQVQEQRRRINAILQDYELQRRLHADTLQFDQQDAQQAAVPVPGTQSLGMQPQ

Sequences:

>Translated_231_residues
MHNEKLSALMDGESFDSELFNDLSRDVKLQQSWQRYHLIRDVMRGDASEVLHLDIADRVAAAIAEEPVRIAPQAVTESQP
TPDAWHRSPFWRKARPFTSRVARLGVASHLTQIGVAACVSLAVIVCVQHYNTQQGVGQDSSQPENPVFNTLPMMGQASPV
SLGVPSANGAGVDNGNQEMQVQEQRRRINAILQDYELQRRLHADTLQFDQQDAQQAAVPVPGTQSLGMQPQ
>Mature_231_residues
MHNEKLSALMDGESFDSELFNDLSRDVKLQQSWQRYHLIRDVMRGDASEVLHLDIADRVAAAIAEEPVRIAPQAVTESQP
TPDAWHRSPFWRKARPFTSRVARLGVASHLTQIGVAACVSLAVIVCVQHYNTQQGVGQDSSQPENPVFNTLPMMGQASPV
SLGVPSANGAGVDNGNQEMQVQEQRRRINAILQDYELQRRLHADTLQFDQQDAQQAAVPVPGTQSLGMQPQ

Specific function: Negative regulator of rpoE [H]

COG id: COG3073

COG function: function code T; Negative regulator of sigma E activity

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseA family [H]

Homologues:

Organism=Escherichia coli, GI1788925, Length=231, Percent_Identity=61.9047619047619, Blast_Score=248, Evalue=3e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005573
- InterPro:   IPR005572 [H]

Pfam domain/function: PF03873 RseA_C; PF03872 RseA_N [H]

EC number: NA

Molecular weight: Translated: 25543; Mature: 25543

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNEKLSALMDGESFDSELFNDLSRDVKLQQSWQRYHLIRDVMRGDASEVLHLDIADRVA
CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEHHHHHHHH
AAIAEEPVRIAPQAVTESQPTPDAWHRSPFWRKARPFTSRVARLGVASHLTQIGVAACVS
HHHHHCCHHHCCHHHHCCCCCCCHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LAVIVCVQHYNTQQGVGQDSSQPENPVFNTLPMMGQASPVSLGVPSANGAGVDNGNQEMQ
HHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEECCCCCCCCCCCCCCHHHH
VQEQRRRINAILQDYELQRRLHADTLQFDQQDAQQAAVPVPGTQSLGMQPQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHNEKLSALMDGESFDSELFNDLSRDVKLQQSWQRYHLIRDVMRGDASEVLHLDIADRVA
CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEHHHHHHHH
AAIAEEPVRIAPQAVTESQPTPDAWHRSPFWRKARPFTSRVARLGVASHLTQIGVAACVS
HHHHHCCHHHCCHHHHCCCCCCCHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LAVIVCVQHYNTQQGVGQDSSQPENPVFNTLPMMGQASPVSLGVPSANGAGVDNGNQEMQ
HHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEECCCCCCCCCCCCCCHHHH
VQEQRRRINAILQDYELQRRLHADTLQFDQQDAQQAAVPVPGTQSLGMQPQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]