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The map label for this gene is rseC [H]

Identifier: 85059768

GI number: 85059768

Start: 3055632

End: 3056090

Strand: Reverse

Name: rseC [H]

Synonym: SG1790

Alternate gene names: 85059768

Gene position: 3056090-3055632 (Counterclockwise)

Preceding gene: 85059769

Following gene: 85059767

Centisome position: 73.27

GC content: 61.66

Gene sequence:

>459_bases
ATGATTAAAGAATGGGCTACGGTCGTCACCTGGCAGCAGGGCATTGCGCAGGTGCGCTGCGAGACGCGTGAAGGGTGCAG
CAGTTGCCACGCCCGGCAAAGCTGCGGTACCCGTCTTCTCGACAAAATGGCAACCGGCACACAGCATCATTTAGAGGTCG
CCAGCCCGTTGCCGCTGGTACCGGGACAGCGCGTGGAGGTGGGTATCAATGAGGGTAGCCTGCTGCGCTCCGCTTTTCTG
GTGTATATGCTGCCGCTGCTGGGACTTATCGGCGGCGAGGCGATTTTCCAAGGCATGCTTGATACCGATCCGCCTGCCGC
CTGTGGCGGCGTGGCGGGCGGTGTCGCCGGTTTTCTTTGCGCGCGCTATCTGGCCCGCCACACATCTGAGACGCGCGCCA
ATCAGCCGGTGATTTTACAGGTGGCCCTGCCGCCTTCGTCATTGCATGTCCAGGACTGA

Upstream 100 bases:

>100_bases
ATACCGAACAGCGCGGCAACCGGGAAATCACCGTCGTGGGCGAACTGCCGCCGGCCACGGCGAAGCGTATCGCCGACGGC
GTCGTTTTCCAGGCGCAGCC

Downstream 100 bases:

>100_bases
CGCTCGCGCCCCGGCGGCGTTGAGGGTTGGGCGTGGCGCTACGGCGTGCGGTGCGCGCGCTTGTTTCGGCCCCTGCCGTA
TTCGGGACGGTGTGGCGGCT

Product: SoxR reducing system protein RseC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MIKEWATVVTWQQGIAQVRCETREGCSSCHARQSCGTRLLDKMATGTQHHLEVASPLPLVPGQRVEVGINEGSLLRSAFL
VYMLPLLGLIGGEAIFQGMLDTDPPAACGGVAGGVAGFLCARYLARHTSETRANQPVILQVALPPSSLHVQD

Sequences:

>Translated_152_residues
MIKEWATVVTWQQGIAQVRCETREGCSSCHARQSCGTRLLDKMATGTQHHLEVASPLPLVPGQRVEVGINEGSLLRSAFL
VYMLPLLGLIGGEAIFQGMLDTDPPAACGGVAGGVAGFLCARYLARHTSETRANQPVILQVALPPSSLHVQD
>Mature_152_residues
MIKEWATVVTWQQGIAQVRCETREGCSSCHARQSCGTRLLDKMATGTQHHLEVASPLPLVPGQRVEVGINEGSLLRSAFL
VYMLPLLGLIGGEAIFQGMLDTDPPAACGGVAGGVAGFLCARYLARHTSETRANQPVILQVALPPSSLHVQD

Specific function: Seems to modulate the activity of rpoE (sigma-E) [H]

COG id: COG3086

COG function: function code T; Positive regulator of sigma E activity

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseC family [H]

Homologues:

Organism=Escherichia coli, GI1788923, Length=145, Percent_Identity=52.4137931034483, Blast_Score=154, Evalue=3e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007359 [H]

Pfam domain/function: PF04246 RseC_MucC [H]

EC number: NA

Molecular weight: Translated: 16204; Mature: 16204

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKEWATVVTWQQGIAQVRCETREGCSSCHARQSCGTRLLDKMATGTQHHLEVASPLPLV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHECCCCCCCC
PGQRVEVGINEGSLLRSAFLVYMLPLLGLIGGEAIFQGMLDTDPPAACGGVAGGVAGFLC
CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
ARYLARHTSETRANQPVILQVALPPSSLHVQD
HHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC
>Mature Secondary Structure
MIKEWATVVTWQQGIAQVRCETREGCSSCHARQSCGTRLLDKMATGTQHHLEVASPLPLV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHECCCCCCCC
PGQRVEVGINEGSLLRSAFLVYMLPLLGLIGGEAIFQGMLDTDPPAACGGVAGGVAGFLC
CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
ARYLARHTSETRANQPVILQVALPPSSLHVQD
HHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7889935; 9278503 [H]