| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is usg [H]
Identifier: 85059598
GI number: 85059598
Start: 2775765
End: 2776778
Strand: Reverse
Name: usg [H]
Synonym: SG1620
Alternate gene names: 85059598
Gene position: 2776778-2775765 (Counterclockwise)
Preceding gene: 85059599
Following gene: 85059597
Centisome position: 66.57
GC content: 62.33
Gene sequence:
>1014_bases ATGTCTGACGGCTGGAGTATCGTTCTTTTGGGAGCAACAGGCGCAGTCGGTACGGCGCTGCTGGAAATTATGCAGGAACG CCAATTCCCGTTCGGGGAGCTGTTTTTACTGTCCAGCGAGCGCAGCGCCGGCGAAACGGTGAGGGTTAACGGACAAAGTT TGCAGGTGAGCGAAGCGGCGCAATTCGATTGGACGCAGGCGCAACTGGCCTTCTTTGTCGCCGGCGCGCAGGCCTCGGCG CTGTATGCGGCTGAAGCCGCCGCCGCCGGCTGCCTGGTGGTCGATGTCAGCGGCCTGTTTGCCCTGGAGCCGGACGTGCC GCTAGTGGTGCCGGGCGTCAATGATGACGTACTGGCCGATTACCGTAACCGCAATATGGTCGCGGTAGCGGATGCGCTGA CCAGTCAACTATTGTTGGTGGTAAAGCCGCTTACCGATCTGGCGGGCCTGGGACATCTGCACGTCAGCAATTTGCTGTCT GCCTCCGCCCACGGCAAAGCGGCGGTGGATGATTTGGCGGGTCAGAGCGCCCGCCTGTTGAATGGTTTGCCCGCCGAGCC GGGCTTTTTCCCGCGTCAGCTGGCGTTCAATCTGTTGCCGCTGCTGCCCGCTGATGCCGGCTCGGTGCGCAGCGAACGCC GTCTGGTGGACGAAGTGCGTAAAATCCTGCGTGATGAGGGGCTGCCTATCTCGGTCAACAGCGTGCAGGCGCCGATATTT TACGGTCATGCACAGCTGGTCCATCTGGAAACGCTGTGGCCGATGGCCGCGGAAGAAGCGCGCGTGGCGCTGGCGGCCGG TGAGGGGCTGACGCTGAGTGAAGAGCTGGACTATCCGACGCCGGTAGAGGACGCCTCGGGAAACGTCGCGCTGAATATCG GTTGTCTGCGCAACGATTACGGCATGCCCGATCTGCTTCAGTTCTGGTCGGTGGCGGATAATGTCCGCTTCGGCGGCGCC CTGATGGCGGTGTTGACCGCGGAGAAACTGATGACCGAGGCCAGCGCGTGGTGA
Upstream 100 bases:
>100_bases CTCTTGGCCGCAGGATGCGCCCGGGACCTTTTTCGCTATTTTGATTGACGGATGCCGCAGGTGCAGTGCGTCGCGGCATC GCAAAACGGGAGATAACATG
Downstream 100 bases:
>100_bases CACTACAAACGGTGCCCCTGCCCGGCGCGGACGAGGCATTGCCGGCGGTGGCCAATGACGGCACGATGAAGCTGGCGCTC GGGATTGAATATGACGGCAG
Product: putative semialdehyde dehydrogenase
Products: L-4-aspartyl phosphate; NADPH; H+
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MSDGWSIVLLGATGAVGTALLEIMQERQFPFGELFLLSSERSAGETVRVNGQSLQVSEAAQFDWTQAQLAFFVAGAQASA LYAAEAAAAGCLVVDVSGLFALEPDVPLVVPGVNDDVLADYRNRNMVAVADALTSQLLLVVKPLTDLAGLGHLHVSNLLS ASAHGKAAVDDLAGQSARLLNGLPAEPGFFPRQLAFNLLPLLPADAGSVRSERRLVDEVRKILRDEGLPISVNSVQAPIF YGHAQLVHLETLWPMAAEEARVALAAGEGLTLSEELDYPTPVEDASGNVALNIGCLRNDYGMPDLLQFWSVADNVRFGGA LMAVLTAEKLMTEASAW
Sequences:
>Translated_337_residues MSDGWSIVLLGATGAVGTALLEIMQERQFPFGELFLLSSERSAGETVRVNGQSLQVSEAAQFDWTQAQLAFFVAGAQASA LYAAEAAAAGCLVVDVSGLFALEPDVPLVVPGVNDDVLADYRNRNMVAVADALTSQLLLVVKPLTDLAGLGHLHVSNLLS ASAHGKAAVDDLAGQSARLLNGLPAEPGFFPRQLAFNLLPLLPADAGSVRSERRLVDEVRKILRDEGLPISVNSVQAPIF YGHAQLVHLETLWPMAAEEARVALAAGEGLTLSEELDYPTPVEDASGNVALNIGCLRNDYGMPDLLQFWSVADNVRFGGA LMAVLTAEKLMTEASAW >Mature_336_residues SDGWSIVLLGATGAVGTALLEIMQERQFPFGELFLLSSERSAGETVRVNGQSLQVSEAAQFDWTQAQLAFFVAGAQASAL YAAEAAAAGCLVVDVSGLFALEPDVPLVVPGVNDDVLADYRNRNMVAVADALTSQLLLVVKPLTDLAGLGHLHVSNLLSA SAHGKAAVDDLAGQSARLLNGLPAEPGFFPRQLAFNLLPLLPADAGSVRSERRLVDEVRKILRDEGLPISVNSVQAPIFY GHAQLVHLETLWPMAAEEARVALAAGEGLTLSEELDYPTPVEDASGNVALNIGCLRNDYGMPDLLQFWSVADNVRFGGAL MAVLTAEKLMTEASAW
Specific function: Unknown
COG id: COG0136
COG function: function code E; Aspartate-semialdehyde dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate-semialdehyde dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788658, Length=334, Percent_Identity=66.1676646706587, Blast_Score=446, Evalue=1e-126,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012080 - InterPro: IPR016040 - InterPro: IPR000534 - InterPro: IPR012280 [H]
Pfam domain/function: PF01118 Semialdhyde_dh; PF02774 Semialdhyde_dhC [H]
EC number: 1.2.1.11
Molecular weight: Translated: 35704; Mature: 35573
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDGWSIVLLGATGAVGTALLEIMQERQFPFGELFLLSSERSAGETVRVNGQSLQVSEAA CCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCEEEECHHH QFDWTQAQLAFFVAGAQASALYAAEAAAAGCLVVDVSGLFALEPDVPLVVPGVNDDVLAD CCCCHHHEEEEEEECCCHHHHHHHHHHHCCEEEEEECCEEEECCCCCEEECCCCCHHHHH YRNRNMVAVADALTSQLLLVVKPLTDLAGLGHLHVSNLLSASAHGKAAVDDLAGQSARLL HCCCCEEEEHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHCCCCCCHHHHHHCCCHHHHH NGLPAEPGFFPRQLAFNLLPLLPADAGSVRSERRLVDEVRKILRDEGLPISVNSVQAPIF CCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCEECCEE YGHAQLVHLETLWPMAAEEARVALAAGEGLTLSEELDYPTPVEDASGNVALNIGCLRNDY ECCEEEEEEEHHCCCCHHHCEEEEEECCCCEEHHCCCCCCCCCCCCCCEEEEEEEEECCC GMPDLLQFWSVADNVRFGGALMAVLTAEKLMTEASAW CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SDGWSIVLLGATGAVGTALLEIMQERQFPFGELFLLSSERSAGETVRVNGQSLQVSEAA CCCEEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCEEEECHHH QFDWTQAQLAFFVAGAQASALYAAEAAAAGCLVVDVSGLFALEPDVPLVVPGVNDDVLAD CCCCHHHEEEEEEECCCHHHHHHHHHHHCCEEEEEECCEEEECCCCCEEECCCCCHHHHH YRNRNMVAVADALTSQLLLVVKPLTDLAGLGHLHVSNLLSASAHGKAAVDDLAGQSARLL HCCCCEEEEHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHCCCCCCHHHHHHCCCHHHHH NGLPAEPGFFPRQLAFNLLPLLPADAGSVRSERRLVDEVRKILRDEGLPISVNSVQAPIF CCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCEECCEE YGHAQLVHLETLWPMAAEEARVALAAGEGLTLSEELDYPTPVEDASGNVALNIGCLRNDY ECCEEEEEEEHHCCCCHHHCEEEEEECCCCEEHHCCCCCCCCCCCCCCEEEEEEEEECCC GMPDLLQFWSVADNVRFGGALMAVLTAEKLMTEASAW CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate 4-semialdehyde; phosphate; NADP+
Specific reaction: L-aspartate 4-semialdehyde + phosphate + NADP+ = L-4-aspartyl phosphate + NADPH + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2991861; 9205837; 9278503; 3029016; 2681152 [H]